Clone BS14653 Report

Search the DGRC for BS14653

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:146
Well:53
Vector:pDNR-Dual
Associated Gene/TranscriptCG14763-RA
Protein status:BS14653.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14653.3prime Sequence

600 bp (600 high quality bases) assembled on 2006-10-13

> BS14653.3prime
ATGGTCTAGAAAGCTTTTAATCGTAGTACAGGTAAAAGGTGGTGCAGACT
GCAAAGTACGAGGGTCTCTCCACGCTGTAGGTCACAAATCCGTCTTTTTC
AGCATCCCACAGGAAGTTGACCATGGAGTAGAGGCCCTGCATCAGGAACT
CGCCCACAGTGACCAGCACTATGTAGCGATATCTGTCGTAGTTGTCGAGT
TTGATGCGGTTCTTGATTTCCTCGCTCACTTGCGCGGCCATGTGGAGGGA
ATGCTTGGGATGGAACATGTACTCATCGTTGTAGTGTCGGTTCATCACCG
CCTTTATGATGTTCTCCACGCGTTCCTTGTTGAGCGGATTCTTGGACTCC
AGGCGGTAGGTGGGCATGAACCGCATGGTGGGCTTGGCTGCCGGAGCACC
CATCGGCAAGGAAACGCCCATATGGGACTTGGTCAGCGATCCGCGCTGGC
TGCTTGCCGGCCTCGGCTTAGTGCCCTCGGCCGACTTTTCTTTCTTCTCC
TTTTTGCCCTTGCCAGTTTCCGCCTCCTTGGCGGCGGTCTCTGGCACGAC
ATCCTTGCTGCGCCGCTCTTCCGGTGAGTCGCCCATGTCGACTGATAACT

BS14653.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:51:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG14763-PA 570 CG14763-RA 1..570 586..17 2850 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:15:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG14763-RC 906 CG14763-RC 16..586 587..17 2855 100 Minus
CG14763-RB 690 CG14763-RB 16..586 587..17 2855 100 Minus
CG14763-RA 647 CG14763-RA 16..586 587..17 2855 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:15:36
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7967059..7967264 183..388 1015 99.5 Plus
2R 25286936 2R 7966839..7967007 17..185 845 100 Plus
2R 25286936 2R 7967886..7968009 464..587 620 100 Plus
2R 25286936 2R 7967319..7967400 383..464 410 100 Plus
Blast to na_te.dros performed on 2015-02-12 11:15:39 has no hits.

BS14653.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:54 Download gff for BS14653.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14763-PA 1..570 17..586 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:46:31 Download gff for BS14653.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14763-RA 8..597 9..596 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:27:07 Download gff for BS14653.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14763-RA 8..597 9..596 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:27:07 Download gff for BS14653.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 7966828..7967004 9..182 97 <- Plus
2R 7967059..7967258 183..382 100 <- Plus
2R 7967319..7967399 383..463 100 <- Plus
2R 7967886..7968017 464..596 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:46:31 Download gff for BS14653.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3854333..3854509 9..182 97 <- Plus
arm_2R 3854564..3854763 183..382 100 <- Plus
arm_2R 3854824..3854904 383..463 100 <- Plus
arm_2R 3855391..3855522 464..596 97   Plus

BS14653.5prime Sequence

600 bp (600 high quality bases) assembled on 2006-10-13

> BS14653.5prime
GAAGTTATCAGTCGACATGGGCGACTCACCGGAAGAGCGGCGCAGCAAGG
ATGTCGTGCCAGAGACCGCCGCCAAGGAGGCGGAAACTGGCAAGGGCAAA
AAGGAGAAGAAAGAAAAGTCGGCCGAGGGCACTAAGCCGAGGCCGGCAAG
CAGCCAGCGCGGATCGCTGACCAAGTCCCATATGGGCGTTTCCTTGCCGA
TGGGTGCTCCGGCAGCCAAGCCCACCATGCGGTTCATGCCCACCTACCGC
CTGGAGTCCAAGAATCCGCTCAACAAGGAACGCGTGGAGAACATCATAAA
GGCGGTGATGAACCGACACTACAACGATGAGTACATGTTCCATCCCAAGC
ATTCCCTCCACATGGCCGCGCAAGTGAGCGAGGAAATCAAGAACCGCATC
AAACTCGACAACTACGACAGATATCGCTACATAGTGCTGGTCACTGTGGG
CGAGTTCCTGATGCAGGGCCTCTACTCCATGGTCAACTTCCTGTGGGATG
CTGAAAAAGACGGATTTGTGACCTACAGCGTGGAGAGACCCTCGTACTTT
GCAGTCTGCACCACCTTTTACCTGTACTACGATTAAAAGCTTTCTAGACC

BS14653.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:51:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG14763-PA 570 CG14763-RA 1..570 17..586 2850 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:15:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG14763-RC 906 CG14763-RC 16..586 16..586 2855 100 Plus
CG14763-RB 690 CG14763-RB 16..586 16..586 2855 100 Plus
CG14763-RA 647 CG14763-RA 16..586 16..586 2855 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:15:44
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7967059..7967264 420..215 1015 99.5 Minus
2R 25286936 2R 7966839..7967007 586..418 845 100 Minus
2R 25286936 2R 7967886..7968009 139..16 620 100 Minus
2R 25286936 2R 7967319..7967400 220..139 410 100 Minus
Blast to na_te.dros performed on 2015-01-31 10:15:47 has no hits.

BS14653.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:54 Download gff for BS14653.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14763-PA 1..570 17..586 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:35:54 Download gff for BS14653.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14763-RA 8..597 7..594 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:45:02 Download gff for BS14653.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14763-RA 8..597 7..594 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:45:02 Download gff for BS14653.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 7966828..7967004 421..594 97 <- Minus
2R 7967059..7967258 221..420 100 <- Minus
2R 7967319..7967399 140..220 100 <- Minus
2R 7967886..7968017 7..139 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:35:54 Download gff for BS14653.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3854333..3854509 421..594 97 <- Minus
arm_2R 3854564..3854763 221..420 100 <- Minus
arm_2R 3854824..3854904 140..220 100 <- Minus
arm_2R 3855391..3855522 7..139 97   Minus

BS14653.complete Sequence

602 bp assembled on 2006-11-01

GenBank Submission: FJ637744

> BS14653.complete
GAAGTTATCAGTCGACATGGGCGACTCACCGGAAGAGCGGCGCAGCAAGG
ATGTCGTGCCAGAGACCGCCGCCAAGGAGGCGGAAACTGGCAAGGGCAAA
AAGGAGAAGAAAGAAAAGTCGGCCGAGGGCACTAAGCCGAGGCCGGCAAG
CAGCCAGCGCGGATCGCTGACCAAGTCCCATATGGGCGTTTCCTTGCCGA
TGGGTGCTCCGGCAGCCAAGCCCACCATGCGGTTCATGCCCACCTACCGC
CTGGAGTCCAAGAATCCGCTCAACAAGGAACGCGTGGAGAACATCATAAA
GGCGGTGATGAACCGACACTACAACGATGAGTACATGTTCCATCCCAAGC
ATTCCCTCCACATGGCCGCGCAAGTGAGCGAGGAAATCAAGAACCGCATC
AAACTCGACAACTACGACAGATATCGCTACATAGTGCTGGTCACTGTGGG
CGAGTTCCTGATGCAGGGCCTCTACTCCATGGTCAACTTCCTGTGGGATG
CTGAAAAAGACGGATTTGTGACCTACAGCGTGGAGAGACCCTCGTACTTT
GCAGTCTGCACCACCTTTTACCTGTACTACGATTAAAAGCTTTCTAGACC
AT

BS14653.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:35:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG14763-RC 570 CG14763-PC 1..570 17..586 2850 100 Plus
CG14763-RB 570 CG14763-PB 1..570 17..586 2850 100 Plus
CG14763-RA 570 CG14763-PA 1..570 17..586 2850 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:36:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG14763-RC 906 CG14763-RC 16..586 16..586 2855 100 Plus
CG14763-RB 690 CG14763-RB 16..586 16..586 2855 100 Plus
CG14763-RA 647 CG14763-RA 16..586 16..586 2855 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:35:57
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7967059..7967264 420..215 1015 99.5 Minus
2R 25286936 2R 7966839..7967007 586..418 845 100 Minus
2R 25286936 2R 7967886..7968009 139..16 620 100 Minus
2R 25286936 2R 7967319..7967400 220..139 410 100 Minus
Blast to na_te.dros performed on 2014-11-27 15:35:58 has no hits.

BS14653.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:21:47 Download gff for BS14653.complete
Subject Subject Range Query Range Percent Splice Strand
CG14763-RA 1..570 17..586 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:53:47 Download gff for BS14653.complete
Subject Subject Range Query Range Percent Splice Strand
CG14763-RA 8..597 7..594 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:48:01 Download gff for BS14653.complete
Subject Subject Range Query Range Percent Splice Strand
CG14763-RA 17..584 17..584 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:21:47 Download gff for BS14653.complete
Subject Subject Range Query Range Percent Splice Strand
CG14763-RA 8..597 7..594 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:11:49 Download gff for BS14653.complete
Subject Subject Range Query Range Percent Splice Strand
CG14763-RA 17..584 17..584 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:11:49 Download gff for BS14653.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7967886..7968008 17..139 100   Minus
2R 7966841..7967004 421..584 100 <- Minus
2R 7967059..7967258 221..420 100 <- Minus
2R 7967319..7967399 140..220 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:48:01 Download gff for BS14653.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3854564..3854763 221..420 100 <- Minus
arm_2R 3854824..3854904 140..220 100 <- Minus
arm_2R 3855391..3855513 17..139 100   Minus
arm_2R 3854346..3854509 421..584 100 <- Minus

BS14653.pep Sequence

Translation from 16 to 585

> BS14653.pep
MGDSPEERRSKDVVPETAAKEAETGKGKKEKKEKSAEGTKPRPASSQRGS
LTKSHMGVSLPMGAPAAKPTMRFMPTYRLESKNPLNKERVENIIKAVMNR
HYNDEYMFHPKHSLHMAAQVSEEIKNRIKLDNYDRYRYIVLVTVGEFLMQ
GLYSMVNFLWDAEKDGFVTYSVERPSYFAVCTTFYLYYD*

BS14653.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:35:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG14763-PC 189 CG14763-PC 1..189 1..189 993 100 Plus
CG14763-PB 189 CG14763-PB 1..189 1..189 993 100 Plus
CG14763-PA 189 CG14763-PA 1..189 1..189 993 100 Plus