Clone Sequence Records
BS14655.complete Sequence
1547 bp assembled on 2009-12-07
GenBank Submission: KX804806
> BS14655.complete
GAAGTTATCAGTCGACATGAATAAAACCTGTGCCCGTTGCCAAAAGGTGG
TTTACCCCATCGAGGAGCTTAAGTGTCTGGACAAAACATGGCACAAAACG
TGTTTCAAATGCACAGAATGCGGCATGACGCTCAATATGAAAACCTACAA
GGGCTACAACAAAATGCCCTACTGCGAGGCACACATCCCGAAGGCGAAGG
CAACGGCCATTGCCGATACGCCCGAATTGAAGCGCATCGCGGAGAACACC
AAAATCCAGTCCAACGTCAAGTACCACGCGGACTTTGAGAAGGCCAAGGG
CAAATTTACACAGGTGGCCGATGACCCGGAAACGCTGCGTATCAAACAGA
ACACGAAGCACATATCGAATGTGGCATATCACGGGGATCTGGAGAAGAAG
GCGGCCATGGAGAAGCAGCGAGGATCCGCCGAGGTCTCCGACAGCAGCAC
AACATCCCAGCAGCAACAGATGCCGCCACCACAGTCGCCGGCGAATCCGC
AGCAGCAGGCGCTCAACAGCTACAACGAGATGCGCTCGGCCATACTCCAG
AACTCGCATCATCCCAGCGGCAATTCCGTGGATCAGTACGACCAGCCACA
GCAGCAGCAACATCAGCCGCAACAGCAGAGCACCAACCCCACGCTGGTGG
CTGCCCAACAGCAGCAATCCCATCATAGCCTACTGAACAACAATGCCAGC
AACGGCGGCATTTCGCACAGCCACCACAGCAACATCAATAATAATGGACA
CGGCTCACAGAACCAAATGTTGCCGCCACAAATGAGACGCTCGGCGGCCA
GTGTCGTCGCCTACGATGGCAATAGCAAGCAACAAGTGGCAGCCGGCCCA
GGAGCTGCCCAAAATCACCTGCAGCAATTATACGCGTCTCCCAATTACGC
CGCTGTGACTCCATCTGAGAATTCAATAAACGTTAAGCAGCACGCCAGCA
ATGGCCATATGCCGAACCAGCAGCAACAGCACGTGGCAGGCGGCAGCAAT
ATCGGGAAGATAGCGGACTACGATCCACTGACGGATGGACCAAGGGTGGT
GCCCAATGCCGGACGGTCCAGCACCACTTTGGTCTACAGCTCCGAGCCAC
GTGGCAATCAAGGTGGCAACAGCGTTTACCCCAAGCGGATTGGTTCGGTT
TCCGATATTGATCCGGCCAATGGCATCTACGGATCGCTCACCGCCGCCGA
GCAGGCTCACCAGCAGCAGAAGCACCAGCAGTACTACCAGCAGGTACAGA
TGATGCAGCAGCAGGAGCACCCGCCGCAGCAACAGCAGATGCGCCAGCAG
CCATCCTACTCCTCCCTGCAGGAAAAACAATCGCGCCAGAGCACAGCAAT
GCGCGTCTATCGGGCCATCTATGACTATGAGGCGCAGGACGTCGACGAGG
TCAGCTTCCGCGAGGGCGACGTCATCTTTGAGGTGGAGTCAATCGATTCC
GGCTGGATGACCGGACGTGTGGAGCGTACCGGCAAGACCGGCATGCTGCC
CGCCAACTACGTGGAGCAGGCGGTTATATAAAAGCTTTCTAGACCAT
BS14655.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:07:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Lasp-RA | 1515 | CG3849-PA | 1..1515 | 17..1531 | 7575 | 100 | Plus |
| Lasp-RC | 1911 | CG3849-PC | 830..1911 | 450..1531 | 5410 | 100 | Plus |
| Lasp-RB | 1974 | CG3849-PB | 893..1974 | 450..1531 | 5410 | 100 | Plus |
| Lasp-RC | 1911 | CG3849-PC | 1..434 | 17..450 | 2170 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:08:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Lasp-RA | 2793 | CG3849-RA | 667..2181 | 17..1531 | 7575 | 100 | Plus |
| Lasp-RC | 3189 | CG3849-RC | 1496..2577 | 450..1531 | 5410 | 100 | Plus |
| Lasp-RB | 4413 | CG3849-RB | 1559..2640 | 450..1531 | 5410 | 100 | Plus |
| Lasp-RC | 3189 | CG3849-RC | 667..1100 | 17..450 | 2170 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:07:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16678807..16679473 | 1116..450 | 3335 | 100 | Minus |
| 3L | 28110227 | 3L | 16678425..16678661 | 1351..1115 | 1185 | 100 | Minus |
| 3L | 28110227 | 3L | 16678179..16678359 | 1531..1351 | 905 | 100 | Minus |
| 3L | 28110227 | 3L | 16680812..16680951 | 449..310 | 700 | 100 | Minus |
| 3L | 28110227 | 3L | 16681236..16681370 | 315..181 | 675 | 100 | Minus |
| 3L | 28110227 | 3L | 16694202..16694296 | 180..86 | 475 | 100 | Minus |
| 3L | 28110227 | 3L | 16710943..16711011 | 85..17 | 345 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 02:07:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6919 | 561..766 | 229 | 61.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6763..6921 | 580..737 | 213 | 65.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2450 | 595..744 | 206 | 63.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6916 | 591..781 | 206 | 61.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..7003 | 472..744 | 203 | 57.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6940 | 500..711 | 191 | 59.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6953 | 495..739 | 183 | 58.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2326..2540 | 582..781 | 175 | 58.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2787..3005 | 593..799 | 172 | 60.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2844..2989 | 599..740 | 170 | 62.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2436..2644 | 439..641 | 164 | 59.2 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1093..1151 | 580..637 | 157 | 76.3 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1057..1143 | 589..675 | 155 | 67 | Plus |
| gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 970..1007 | 591..628 | 136 | 84.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1540..1600 | 582..642 | 134 | 68.9 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1110..1152 | 585..627 | 134 | 79.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2478..2662 | 442..627 | 133 | 58.1 | Plus |
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3286..3437 | 591..744 | 131 | 61.4 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1117..1167 | 580..630 | 120 | 70.6 | Plus |
BS14655.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:45:58 Download gff for
BS14655.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lasp-RA | 642..2154 | 17..1529 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:06:42 Download gff for
BS14655.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lasp-RA | 667..2179 | 17..1529 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:25:06 Download gff for
BS14655.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lasp-RA | 642..2154 | 17..1529 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:04:43 Download gff for
BS14655.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lasp-RA | 667..2179 | 17..1529 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:04:43 Download gff for
BS14655.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16678181..16678358 | 1352..1529 | 100 | <- | Minus |
| 3L | 16678425..16678660 | 1116..1351 | 100 | <- | Minus |
| 3L | 16678808..16679473 | 450..1115 | 100 | <- | Minus |
| 3L | 16680812..16680947 | 314..449 | 100 | <- | Minus |
| 3L | 16681238..16681370 | 181..313 | 100 | <- | Minus |
| 3L | 16694202..16694296 | 86..180 | 100 | <- | Minus |
| 3L | 16710943..16711011 | 17..85 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:06:42 Download gff for
BS14655.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16671281..16671458 | 1352..1529 | 100 | <- | Minus |
| arm_3L | 16671525..16671760 | 1116..1351 | 100 | <- | Minus |
| arm_3L | 16671908..16672573 | 450..1115 | 100 | <- | Minus |
| arm_3L | 16673912..16674047 | 314..449 | 100 | <- | Minus |
| arm_3L | 16674338..16674470 | 181..313 | 100 | <- | Minus |
| arm_3L | 16687302..16687396 | 86..180 | 100 | <- | Minus |
| arm_3L | 16704043..16704111 | 17..85 | 100 | | Minus |
BS14655.3prime Sequence
749 bp (730 high quality bases) assembled on 2007-03-15
> BS14655.3prime
ATGGTCTAGAAAGCTTTTATATAACCGCCTGCTCCACGTAGTTGGCGGGC
AGCATGCCGGTCTTGCCGGTACGCTCCACACGTCCGGTCATCCAGCCGGA
ATCGATTGACTCCACCTCAAAGATGACGTCGCCCTCGCGGAAGCTGACCT
CGTCGACGTCCTGCGCCTCATAGTCATAGATGGCCCGATAGACGCGCATT
GCTGTGCTCTGGCGCGATTGTTTTTCCTGCAGGGAGGAGTAGGATGGCTG
CTGGCGCATCTGCTGTTGCTGCGGCGGGTGCTCCTGCTGCTGCATCATCT
GTACCTGCTGGTAGTACTGCTGGTGCTTCTGCTGCTGGTGAGCCTGCTCG
GCGGCGGTGAGCGATCCGTAGATGCCATTGGCCGGATCAATATCGGAAAC
CGAACCAATCCGCTTGGGGTAAACGCTGTTGCCACCTTGATTGCCACGTG
GCTCGGAGCTGTAGACCAAAGTGGTGCTGGACCGTCCGGCATTGGGCACC
ACCCTTGGTCCATCCGTCAGTGGATCGTAGTCCGCTATCTTCCCGATATT
GCTGCCGCCTGCCACGTGCTGTTGCTGCTGGTTCGGCATATGGCCATTGC
TGGCGTGCTGCTTAACGTTTATTGAATTCTCAGATGGAGTCACAGCGGCG
TAATTGGGAGACGCGTATAATTGCTGCAGGTGATTTTGGGCAGCTCCTGG
GCCGGCTGCCACTTGTTGCTTTGCTATTGCCATCGTAGGCGACCACACT
BS14655.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:51:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3849-PB | 1974 | Lasp-RB | 1270..1974 | 721..17 | 3525 | 100 | Minus |
| CG3849-PA | 1515 | Lasp-RA | 811..1515 | 721..17 | 3525 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:10:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Lasp-RC | 3189 | CG3849-RC | 1846..2577 | 749..17 | 3625 | 99.7 | Minus |
| Lasp-RA | 2793 | CG3849-RA | 1450..2181 | 749..17 | 3625 | 99.7 | Minus |
| Lasp-RB | 4413 | CG3849-RB | 1909..2640 | 749..17 | 3625 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:10:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16678807..16679123 | 432..749 | 1525 | 99.4 | Plus |
| 3L | 28110227 | 3L | 16678425..16678661 | 197..433 | 1185 | 100 | Plus |
| 3L | 28110227 | 3L | 16678179..16678359 | 17..197 | 905 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 21:10:15 has no hits.
BS14655.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:55 Download gff for
BS14655.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3849-PA | 784..1515 | 17..749 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 06:26:13 Download gff for
BS14655.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lasp-RB | 1909..2643 | 14..749 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:40:08 Download gff for
BS14655.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lasp-RB | 1909..2643 | 14..749 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:40:08 Download gff for
BS14655.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16678176..16678358 | 14..196 | 99 | <- | Plus |
| 3L | 16678425..16678660 | 197..432 | 100 | <- | Plus |
| 3L | 16678808..16679123 | 433..749 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 06:26:13 Download gff for
BS14655.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16671276..16671458 | 14..196 | 99 | <- | Plus |
| arm_3L | 16671525..16671760 | 197..432 | 100 | <- | Plus |
| arm_3L | 16671908..16672223 | 433..749 | 99 | | Plus |
BS14655.5prime Sequence
832 bp (724 high quality bases) assembled on 2006-10-13
> BS14655.5prime
GAAGTTATCAGTCGACATGAATAAAACCTGTGCCCGTTGCCAAAAGGTGG
TTTACCCCATCGAGGAGCTTAAGTGTCTGGACAAAACATGGCACAAAACG
TGTTTCAAATGCACAGAATGCGGCATGACGCTCAATATGAAAACCTACAA
GGGCTACAACAAAATGCCCTACTGCGAGGCACACATCCCGAAGGCGAAGG
CAACGGCCATTGCCGATACGCCCGAATTGAAGCGCATCGCGGAGAACACC
AAAATCCAGTCCAACGTCAAGTACCACGCGGACTTTGAGAAGGCCAAGGG
CAAATTTACACAGGTGGCCGATGACCCGGAAACGCTGCGTATCAAACAGA
ACACGAAGCACATATCGAATGTGGCATATCACGGGGATCTGGAGAAGAAG
GCGGCCATGGAGAAGCAGCGAGGATCCGCCGAGGTCTCCGACAGCAGCAC
AACATCCCAGCAGCAACAGATGCCGCCACCACAGTCGCCGGCGAATCCGC
AGCAGCAGGCGCTCAACAGCTACAACGAGATGCGCTCGGCCATACTCCAG
AACTCGCATCATCCCAGCGGCAATTCCGTGGATCAGTACGACCAGCCACA
GCAGCAGCAACATCAGCCGCAACAGCAGAGCACCAACCCCACGCTGGTGG
CTGCCCAACAGCAGCAATCCCATCATAGCCTACTGAACAACAATGCCAGC
AACGGCGGCATTTCGCACAGCCACCACAGCAACATCAATAATAATGGACA
CGGCTCACAGAAACCAAATGTTGCCGCCACAAATGAAACGCTCGGCGGCC
AGTGTCGTCGCCTACGATGGCAATAACAAGCA
BS14655.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:53:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3849-PA | 1515 | Lasp-RA | 1..815 | 17..832 | 3990 | 99.6 | Plus |
| CG3849-PB | 1974 | Lasp-RB | 1..433 | 17..449 | 2165 | 100 | Plus |
| CG3849-PB | 1974 | Lasp-RB | 893..1274 | 450..832 | 1825 | 99.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:12:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Lasp-RA | 2793 | CG3849-RA | 667..1481 | 17..832 | 4025 | 99.6 | Plus |
| Lasp-RD | 2127 | CG3849-RD | 667..1105 | 17..454 | 2170 | 99.8 | Plus |
| Lasp-RC | 3189 | CG3849-RC | 667..1100 | 17..450 | 2170 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:12:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16679092..16679473 | 832..450 | 1835 | 99.2 | Minus |
| 3L | 28110227 | 3L | 16680812..16680951 | 449..310 | 700 | 100 | Minus |
| 3L | 28110227 | 3L | 16681236..16681370 | 315..181 | 675 | 100 | Minus |
| 3L | 28110227 | 3L | 16694202..16694296 | 180..86 | 475 | 100 | Minus |
| 3L | 28110227 | 3L | 16710943..16711011 | 85..17 | 345 | 100 | Minus |
Blast to na_te.dros performed 2015-02-13 06:12:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6921 | 561..768 | 230 | 61 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6763..6921 | 580..737 | 213 | 65.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2450 | 595..744 | 206 | 63.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..7003 | 472..744 | 203 | 57.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6932 | 591..800 | 203 | 61.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2291..2650 | 400..743 | 194 | 56.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6999 | 500..768 | 192 | 58 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2361..2542 | 548..740 | 185 | 59.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6861 | 598..743 | 184 | 61.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6953 | 495..739 | 183 | 58.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2844..2989 | 599..740 | 170 | 62.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2326..2540 | 582..782 | 168 | 59 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2634..2921 | 442..738 | 167 | 58.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2436..2644 | 439..641 | 164 | 59.2 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1093..1151 | 580..637 | 157 | 76.3 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1057..1143 | 589..675 | 155 | 67 | Plus |
| gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 970..1007 | 591..628 | 136 | 84.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1540..1600 | 582..642 | 134 | 68.9 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1110..1152 | 585..627 | 134 | 79.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2478..2662 | 442..627 | 133 | 58.1 | Plus |
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3286..3437 | 591..744 | 131 | 61.4 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1117..1167 | 580..630 | 120 | 70.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6532..6564 | 595..627 | 111 | 81.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1515..1576 | 578..641 | 108 | 65.6 | Plus |
BS14655.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:55 Download gff for
BS14655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3849-PA | 1..814 | 17..831 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 19:43:18 Download gff for
BS14655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lasp-RA | 667..1480 | 17..831 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:15:07 Download gff for
BS14655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lasp-RA | 667..1480 | 17..831 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:15:07 Download gff for
BS14655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16679093..16679473 | 450..831 | 99 | <- | Minus |
| 3L | 16680812..16680947 | 314..449 | 100 | <- | Minus |
| 3L | 16681238..16681370 | 181..313 | 100 | <- | Minus |
| 3L | 16694202..16694296 | 86..180 | 100 | <- | Minus |
| 3L | 16710943..16711011 | 17..85 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 19:43:18 Download gff for
BS14655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16672193..16672573 | 450..831 | 99 | <- | Minus |
| arm_3L | 16673912..16674047 | 314..449 | 100 | <- | Minus |
| arm_3L | 16674338..16674470 | 181..313 | 100 | <- | Minus |
| arm_3L | 16687302..16687396 | 86..180 | 100 | <- | Minus |
| arm_3L | 16704043..16704111 | 17..85 | 100 | | Minus |
BS14655.pep Sequence
Translation from 16 to 1530
> BS14655.pep
MNKTCARCQKVVYPIEELKCLDKTWHKTCFKCTECGMTLNMKTYKGYNKM
PYCEAHIPKAKATAIADTPELKRIAENTKIQSNVKYHADFEKAKGKFTQV
ADDPETLRIKQNTKHISNVAYHGDLEKKAAMEKQRGSAEVSDSSTTSQQQ
QMPPPQSPANPQQQALNSYNEMRSAILQNSHHPSGNSVDQYDQPQQQQHQ
PQQQSTNPTLVAAQQQQSHHSLLNNNASNGGISHSHHSNINNNGHGSQNQ
MLPPQMRRSAASVVAYDGNSKQQVAAGPGAAQNHLQQLYASPNYAAVTPS
ENSINVKQHASNGHMPNQQQQHVAGGSNIGKIADYDPLTDGPRVVPNAGR
SSTTLVYSSEPRGNQGGNSVYPKRIGSVSDIDPANGIYGSLTAAEQAHQQ
QKHQQYYQQVQMMQQQEHPPQQQQMRQQPSYSSLQEKQSRQSTAMRVYRA
IYDYEAQDVDEVSFREGDVIFEVESIDSGWMTGRVERTGKTGMLPANYVE
QAVI*
BS14655.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:08:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Lasp-PA | 504 | CG3849-PA | 1..504 | 1..504 | 2662 | 100 | Plus |
| Lasp-PC | 636 | CG3849-PC | 276..636 | 144..504 | 1884 | 99.4 | Plus |
| Lasp-PB | 657 | CG3849-PB | 297..657 | 144..504 | 1884 | 99.4 | Plus |
| Lasp-PC | 636 | CG3849-PC | 1..331 | 1..322 | 850 | 55.9 | Plus |
| Lasp-PB | 657 | CG3849-PB | 1..352 | 1..322 | 838 | 54.5 | Plus |
| Lasp-PD | 282 | CG3849-PD | 1..220 | 1..221 | 828 | 74 | Plus |
| Lasp-PD | 282 | CG3849-PD | 142..282 | 364..504 | 709 | 97.2 | Plus |
| ovo-PC | 1222 | CG6824-PC | 770..1046 | 122..444 | 179 | 26.4 | Plus |
