Clone BS14656 Report

Search the DGRC for BS14656

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:146
Well:56
Vector:pDNR-Dual
Associated Gene/TranscriptCG10326-RA
Protein status:BS14656.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14656.5prime Sequence

624 bp (624 high quality bases) assembled on 2006-10-13

> BS14656.5prime
GAAGTTATCAGTCGACATGGCAGCATCGCAGGTTGACCAGAAACGAGCAC
TTAACAAATTAAAGCACGACTTGGAGCCTTTCCGGACAGCCATCGTGGGA
GCGTACGGCGTGCTAACCTGGGAGAAGCAGTACTACGCCGGAGTGGTGTT
TGGCGTCATCAGCTGCCTGTACCTGGTGCTGTGGTACCTGGACTTGTCGC
TGATTACCCTGCTGTCGCTGCTCGGTGTCATTAGCATTTTGCTGAACTAC
GCATTCCCCATGGTGTCGCGCCTGATCTTTGGCGGAGTCAACTGGGATGG
CGACCAGGAGGCCAAGTTCGAGGACGTGTGCGGCCAGGTGTGCGCCGTCA
AGGGCAGCCTGGTGGTCTGGTACGAGTACCTCTTCAACGAGCGGAAGTCC
ACAGTGTTTGTAATCGTCATGAGTTTGGGTCTTTTGGCTATGGCCTGGAT
TGGAGCCATCATTAACAATCTACTGCTTATGTACTTGGCCACCCTACTCA
TCCTCATGTGGCCAGGACTACAGAACAAGGACATTTTTAAGGCCATCACC
CAAAGGGCCTCGAAGATTATTAACGAGAAGATCCAGTGCGGCAAAAGGAA
GCTGCAGTAAAAGCTTTCTAGACC

BS14656.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:51:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG10326-PA 594 CG10326-RA 1..594 17..610 2970 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:38:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG10326-RB 1178 CG10326-RB 164..759 16..611 2980 100 Plus
CG10326-RA 1294 CG10326-RA 280..875 16..611 2980 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:38:11
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16644014..16644383 37..406 1850 100 Plus
3R 32079331 3R 16644547..16644752 406..611 1030 100 Plus
Blast to na_te.dros performed on 2015-02-10 21:38:15 has no hits.

BS14656.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:56 Download gff for BS14656.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10326-PA 1..594 17..610 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:07:13 Download gff for BS14656.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10326-RA 274..875 10..611 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:43:50 Download gff for BS14656.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10326-RA 274..875 10..611 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:43:50 Download gff for BS14656.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 16644018..16644383 41..406 100 -> Plus
3R 16644548..16644752 407..611 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:07:13 Download gff for BS14656.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12469740..12470105 41..406 100 -> Plus
arm_3R 12470270..12470474 407..611 100   Plus

BS14656.3prime Sequence

624 bp (624 high quality bases) assembled on 2006-10-13

> BS14656.3prime
ATGGTCTAGAAAGCTTTTACTGCAGCTTCCTTTTGCCGCACTGGATCTTC
TCGTTAATAATCTTCGAGGCCCTTTGGGTGATGGCCTTAAAAATGTCCTT
GTTCTGTAGTCCTGGCCACATGAGGATGAGTAGGGTGGCCAAGTACATAA
GCAGTAGATTGTTAATGATGGCTCCAATCCAGGCCATAGCCAAAAGACCC
AAACTCATGACGATTACAAACACTGTGGACTTCCGCTCGTTGAAGAGGTA
CTCGTACCAGACCACCAGGCTGCCCTTGACGGCGCACACCTGGCCGCACA
CGTCCTCGAACTTGGCCTCCTGGTCGCCATCCCAGTTGACTCCGCCAAAG
ATCAGGCGCGACACCATGGGGAATGCGTAGTTCAGCAAAATGCTAATGAC
ACCGAGCAGCGACAGCAGGGTAATCAGCGACAAGTCCAGGTACCACAGCA
CCAGGTACAGGCAGCTGATGACGCCAAACACCACTCCGGCGTAGTACTGC
TTCTCCCAGGTTAGCACGCCGTACGCTCCCACGATGGCTGTCCGGAAAGG
CTCCAAGTCGTGCTTTAATTTGTTAAGTGCTCGTTTCTGGTCAACCTGCG
ATGCTGCCATGTCGACTGATAACT

BS14656.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:51:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG10326-PA 594 CG10326-RA 1..594 610..17 2970 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:37:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG10326-RB 1178 CG10326-RB 164..759 611..16 2980 100 Minus
CG10326-RA 1294 CG10326-RA 280..875 611..16 2980 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:37:19
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16644014..16644383 590..221 1850 100 Minus
3R 32079331 3R 16644547..16644752 221..16 1030 100 Minus
Blast to na_te.dros performed on 2015-02-10 21:37:22 has no hits.

BS14656.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:56 Download gff for BS14656.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10326-PA 1..594 17..610 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:07:08 Download gff for BS14656.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10326-RA 274..875 16..617 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:43:42 Download gff for BS14656.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10326-RA 274..875 16..617 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:43:42 Download gff for BS14656.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 16644018..16644383 221..586 100 -> Minus
3R 16644548..16644752 16..220 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:07:08 Download gff for BS14656.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12470270..12470474 16..220 100   Minus
arm_3R 12469740..12470105 221..586 100 -> Minus

BS14656.complete Sequence

626 bp assembled on 2006-11-01

GenBank Submission: FJ637745

> BS14656.complete
GAAGTTATCAGTCGACATGGCAGCATCGCAGGTTGACCAGAAACGAGCAC
TTAACAAATTAAAGCACGACTTGGAGCCTTTCCGGACAGCCATCGTGGGA
GCGTACGGCGTGCTAACCTGGGAGAAGCAGTACTACGCCGGAGTGGTGTT
TGGCGTCATCAGCTGCCTGTACCTGGTGCTGTGGTACCTGGACTTGTCGC
TGATTACCCTGCTGTCGCTGCTCGGTGTCATTAGCATTTTGCTGAACTAC
GCATTCCCCATGGTGTCGCGCCTGATCTTTGGCGGAGTCAACTGGGATGG
CGACCAGGAGGCCAAGTTCGAGGACGTGTGCGGCCAGGTGTGCGCCGTCA
AGGGCAGCCTGGTGGTCTGGTACGAGTACCTCTTCAACGAGCGGAAGTCC
ACAGTGTTTGTAATCGTCATGAGTTTGGGTCTTTTGGCTATGGCCTGGAT
TGGAGCCATCATTAACAATCTACTGCTTATGTACTTGGCCACCCTACTCA
TCCTCATGTGGCCAGGACTACAGAACAAGGACATTTTTAAGGCCATCACC
CAAAGGGCCTCGAAGATTATTAACGAGAAGATCCAGTGCGGCAAAAGGAA
GCTGCAGTAAAAGCTTTCTAGACCAT

BS14656.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:34:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG10326-RB 594 CG10326-PB 1..594 17..610 2970 100 Plus
CG10326-RA 594 CG10326-PA 1..594 17..610 2970 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:34:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG10326-RB 1178 CG10326-RB 164..759 16..611 2980 100 Plus
CG10326-RA 1294 CG10326-RA 280..875 16..611 2980 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:34:20
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16644014..16644383 37..406 1850 100 Plus
3R 32079331 3R 16644547..16644752 406..611 1030 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:34:21 has no hits.

BS14656.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:21:58 Download gff for BS14656.complete
Subject Subject Range Query Range Percent Splice Strand
CG10326-RA 1..594 17..610 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:53:57 Download gff for BS14656.complete
Subject Subject Range Query Range Percent Splice Strand
CG10326-RA 274..875 10..611 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:02:21 Download gff for BS14656.complete
Subject Subject Range Query Range Percent Splice Strand
CG10326-RA 281..872 17..608 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:21:58 Download gff for BS14656.complete
Subject Subject Range Query Range Percent Splice Strand
CG10326-RA 274..875 10..611 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:44:27 Download gff for BS14656.complete
Subject Subject Range Query Range Percent Splice Strand
CG10326-RA 281..872 17..608 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:44:27 Download gff for BS14656.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16644548..16644749 407..608 100   Plus
3R 16643885..16643908 17..40 100 -> Plus
3R 16644018..16644383 41..406 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:02:21 Download gff for BS14656.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12469607..12469630 17..40 100 -> Plus
arm_3R 12469740..12470105 41..406 100 -> Plus
arm_3R 12470270..12470471 407..608 100   Plus

BS14656.pep Sequence

Translation from 16 to 609

> BS14656.pep
MAASQVDQKRALNKLKHDLEPFRTAIVGAYGVLTWEKQYYAGVVFGVISC
LYLVLWYLDLSLITLLSLLGVISILLNYAFPMVSRLIFGGVNWDGDQEAK
FEDVCGQVCAVKGSLVVWYEYLFNERKSTVFVIVMSLGLLAMAWIGAIIN
NLLLMYLATLLILMWPGLQNKDIFKAITQRASKIINEKIQCGKRKLQ*

BS14656.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:35:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG10326-PB 197 CG10326-PB 1..197 1..197 1011 100 Plus
CG10326-PA 197 CG10326-PB 1..197 1..197 1011 100 Plus