Clone BS14657 Report

Search the DGRC for BS14657

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:146
Well:57
Vector:pDNR-Dual
Associated Gene/TranscriptCG11106-RA
Protein status:BS14657.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14657.3prime Sequence

369 bp (369 high quality bases) assembled on 2006-10-13

> BS14657.3prime
ATGGTCTAGAAAGCTTCTACCAAAAGTCGCCCCGCGCTCCAGATCCTGCT
CCGTGACCAGCTCCAGATCCACCGCCGTAGGCCTGAGTTATATCCATGCC
GTTGTAAGCGTAAAAGGCATCCACATCGTCCAATCCGGGCTCCCGGAATT
GAGGACAGTAGTTCGGCATGGGACAGCTCATCTGGCGAATGTCACCCATG
CCCATCCGTTGAAAGTAATTGCTATGCGAATGGTTCTGAGGGTGTTGGTA
ATTCTGGTAGCCGGCGGTATTGGGGTTCCACATATCCCCCATCCGGGGAT
ATACCGGGGAAGTGACTGGTTGACCGTCCCAGAAGGAAAGCGTATTCCAC
ACCATGTCGACTGATAACT

BS14657.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:51:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG11106-PA 339 CG11106-RA 1..339 355..17 1695 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:16:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG11106-RB 511 CG11106-RB 86..425 356..17 1700 100 Minus
CG11106-RA 559 CG11106-RA 134..473 356..17 1700 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:16:08
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11202381..11202720 356..17 1700 100 Minus
Blast to na_te.dros performed on 2015-02-12 11:16:10 has no hits.

BS14657.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:56 Download gff for BS14657.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11106-PA 1..339 17..355 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:46:40 Download gff for BS14657.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11106-RA 129..478 12..362 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:28:18 Download gff for BS14657.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11106-RA 129..478 12..362 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:28:18 Download gff for BS14657.3prime
Subject Subject Range Query Range Percent Splice Strand
X 11202376..11202725 12..362 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:46:40 Download gff for BS14657.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11096409..11096758 12..362 98   Minus

BS14657.5prime Sequence

369 bp (369 high quality bases) assembled on 2006-10-13

> BS14657.5prime
GAAGTTATCAGTCGACATGGTGTGGAATACGCTTTCCTTCTGGGACGGTC
AACCAGTCACTTCCCCGGTATATCCCCGGATGGGGGATATGTGGAACCCC
AATACCGCCGGCTACCAGAATTACCAACACCCTCAGAACCATTCGCATAG
CAATTACTTTCAACGGATGGGCATGGGTGACATTCGCCAGATGAGCTGTC
CCATGCCGAACTACTGTCCTCAATTCCGGGAGCCCGGATTGGACGATGTG
GATGCCTTTTACGCTTACAACGGCATGGATATAACTCAGGCCTACGGCGG
TGGATCTGGAGCTGGTCACGGAGCAGGATCTGGAGCGCGGGGCGACTTTT
GGTAGAAGCTTTCTAGACC

BS14657.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:51:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG11106-PA 339 CG11106-RA 1..339 17..355 1695 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:29:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG11106-RB 511 CG11106-RB 86..425 16..355 1700 100 Plus
CG11106-RA 559 CG11106-RA 134..473 16..355 1700 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:29:21
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11202381..11202720 16..355 1700 100 Plus
Blast to na_te.dros performed on 2015-02-10 16:29:25 has no hits.

BS14657.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:56 Download gff for BS14657.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11106-PA 1..339 17..355 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 20:14:12 Download gff for BS14657.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11106-RA 129..478 10..360 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:47:23 Download gff for BS14657.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11106-RA 129..478 10..360 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:47:23 Download gff for BS14657.5prime
Subject Subject Range Query Range Percent Splice Strand
X 11202376..11202725 10..360 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 20:14:12 Download gff for BS14657.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11096409..11096758 10..360 98   Plus

BS14657.complete Sequence

371 bp assembled on 2006-11-01

GenBank Submission: FJ637746

> BS14657.complete
GAAGTTATCAGTCGACATGGTGTGGAATACGCTTTCCTTCTGGGACGGTC
AACCAGTCACTTCCCCGGTATATCCCCGGATGGGGGATATGTGGAACCCC
AATACCGCCGGCTACCAGAATTACCAACACCCTCAGAACCATTCGCATAG
CAATTACTTTCAACGGATGGGCATGGGTGACATTCGCCAGATGAGCTGTC
CCATGCCGAACTACTGTCCTCAATTCCGGGAGCCCGGATTGGACGATGTG
GATGCCTTTTACGCTTACAACGGCATGGATATAACTCAGGCCTACGGCGG
TGGATCTGGAGCTGGTCACGGAGCAGGATCTGGAGCGCGGGGCGACTTTT
GGTAGAAGCTTTCTAGACCAT

BS14657.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:30:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG11106-RB 339 CG11106-PB 1..339 17..355 1695 100 Plus
CG11106-RA 339 CG11106-PA 1..339 17..355 1695 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:30:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG11106-RB 511 CG11106-RB 86..425 16..355 1700 100 Plus
CG11106-RA 559 CG11106-RA 134..473 16..355 1700 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:30:25
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11202381..11202720 16..355 1700 100 Plus
Blast to na_te.dros performed on 2014-11-27 14:30:26 has no hits.

BS14657.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:19:17 Download gff for BS14657.complete
Subject Subject Range Query Range Percent Splice Strand
CG11106-RA 1..339 17..355 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:15:26 Download gff for BS14657.complete
Subject Subject Range Query Range Percent Splice Strand
CG11106-RA 108..457 10..360 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:45:02 Download gff for BS14657.complete
Subject Subject Range Query Range Percent Splice Strand
CG11106-RA 135..473 17..355 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:19:17 Download gff for BS14657.complete
Subject Subject Range Query Range Percent Splice Strand
CG11106-RA 108..457 10..360 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:13:13 Download gff for BS14657.complete
Subject Subject Range Query Range Percent Splice Strand
CG11106-RA 135..473 17..355 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:13:13 Download gff for BS14657.complete
Subject Subject Range Query Range Percent Splice Strand
X 11202382..11202720 17..355 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:45:02 Download gff for BS14657.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11096415..11096753 17..355 100   Plus

BS14657.pep Sequence

Translation from 16 to 354

> BS14657.pep
MVWNTLSFWDGQPVTSPVYPRMGDMWNPNTAGYQNYQHPQNHSHSNYFQR
MGMGDIRQMSCPMPNYCPQFREPGLDDVDAFYAYNGMDITQAYGGGSGAG
HGAGSGARGDFW*

BS14657.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:54:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG11106-PB 112 CG11106-PB 1..112 1..112 653 100 Plus
CG11106-PA 112 CG11106-PA 1..112 1..112 653 100 Plus
CG15200-PA 113 CG15200-PA 3..113 4..112 139 31.5 Plus