Clone Sequence Records
BS14657.3prime Sequence
369 bp (369 high quality bases) assembled on 2006-10-13
> BS14657.3prime
ATGGTCTAGAAAGCTTCTACCAAAAGTCGCCCCGCGCTCCAGATCCTGCT
CCGTGACCAGCTCCAGATCCACCGCCGTAGGCCTGAGTTATATCCATGCC
GTTGTAAGCGTAAAAGGCATCCACATCGTCCAATCCGGGCTCCCGGAATT
GAGGACAGTAGTTCGGCATGGGACAGCTCATCTGGCGAATGTCACCCATG
CCCATCCGTTGAAAGTAATTGCTATGCGAATGGTTCTGAGGGTGTTGGTA
ATTCTGGTAGCCGGCGGTATTGGGGTTCCACATATCCCCCATCCGGGGAT
ATACCGGGGAAGTGACTGGTTGACCGTCCCAGAAGGAAAGCGTATTCCAC
ACCATGTCGACTGATAACT
BS14657.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:51:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11106-PA | 339 | CG11106-RA | 1..339 | 355..17 | 1695 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:16:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11106-RB | 511 | CG11106-RB | 86..425 | 356..17 | 1700 | 100 | Minus |
CG11106-RA | 559 | CG11106-RA | 134..473 | 356..17 | 1700 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:16:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11202381..11202720 | 356..17 | 1700 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 11:16:10 has no hits.
BS14657.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:56 Download gff for
BS14657.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11106-PA | 1..339 | 17..355 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:46:40 Download gff for
BS14657.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11106-RA | 129..478 | 12..362 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:28:18 Download gff for
BS14657.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11106-RA | 129..478 | 12..362 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:28:18 Download gff for
BS14657.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11202376..11202725 | 12..362 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:46:40 Download gff for
BS14657.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11096409..11096758 | 12..362 | 98 | | Minus |
BS14657.5prime Sequence
369 bp (369 high quality bases) assembled on 2006-10-13
> BS14657.5prime
GAAGTTATCAGTCGACATGGTGTGGAATACGCTTTCCTTCTGGGACGGTC
AACCAGTCACTTCCCCGGTATATCCCCGGATGGGGGATATGTGGAACCCC
AATACCGCCGGCTACCAGAATTACCAACACCCTCAGAACCATTCGCATAG
CAATTACTTTCAACGGATGGGCATGGGTGACATTCGCCAGATGAGCTGTC
CCATGCCGAACTACTGTCCTCAATTCCGGGAGCCCGGATTGGACGATGTG
GATGCCTTTTACGCTTACAACGGCATGGATATAACTCAGGCCTACGGCGG
TGGATCTGGAGCTGGTCACGGAGCAGGATCTGGAGCGCGGGGCGACTTTT
GGTAGAAGCTTTCTAGACC
BS14657.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:51:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11106-PA | 339 | CG11106-RA | 1..339 | 17..355 | 1695 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:29:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11106-RB | 511 | CG11106-RB | 86..425 | 16..355 | 1700 | 100 | Plus |
CG11106-RA | 559 | CG11106-RA | 134..473 | 16..355 | 1700 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:29:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11202381..11202720 | 16..355 | 1700 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 16:29:25 has no hits.
BS14657.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:54:56 Download gff for
BS14657.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11106-PA | 1..339 | 17..355 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 20:14:12 Download gff for
BS14657.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11106-RA | 129..478 | 10..360 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:47:23 Download gff for
BS14657.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11106-RA | 129..478 | 10..360 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:47:23 Download gff for
BS14657.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11202376..11202725 | 10..360 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 20:14:12 Download gff for
BS14657.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11096409..11096758 | 10..360 | 98 | | Plus |
BS14657.complete Sequence
371 bp assembled on 2006-11-01
GenBank Submission: FJ637746
> BS14657.complete
GAAGTTATCAGTCGACATGGTGTGGAATACGCTTTCCTTCTGGGACGGTC
AACCAGTCACTTCCCCGGTATATCCCCGGATGGGGGATATGTGGAACCCC
AATACCGCCGGCTACCAGAATTACCAACACCCTCAGAACCATTCGCATAG
CAATTACTTTCAACGGATGGGCATGGGTGACATTCGCCAGATGAGCTGTC
CCATGCCGAACTACTGTCCTCAATTCCGGGAGCCCGGATTGGACGATGTG
GATGCCTTTTACGCTTACAACGGCATGGATATAACTCAGGCCTACGGCGG
TGGATCTGGAGCTGGTCACGGAGCAGGATCTGGAGCGCGGGGCGACTTTT
GGTAGAAGCTTTCTAGACCAT
BS14657.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:30:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11106-RB | 339 | CG11106-PB | 1..339 | 17..355 | 1695 | 100 | Plus |
CG11106-RA | 339 | CG11106-PA | 1..339 | 17..355 | 1695 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:30:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11106-RB | 511 | CG11106-RB | 86..425 | 16..355 | 1700 | 100 | Plus |
CG11106-RA | 559 | CG11106-RA | 134..473 | 16..355 | 1700 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:30:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11202381..11202720 | 16..355 | 1700 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:30:26 has no hits.
BS14657.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:19:17 Download gff for
BS14657.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11106-RA | 1..339 | 17..355 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:15:26 Download gff for
BS14657.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11106-RA | 108..457 | 10..360 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:45:02 Download gff for
BS14657.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11106-RA | 135..473 | 17..355 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:19:17 Download gff for
BS14657.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11106-RA | 108..457 | 10..360 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:13:13 Download gff for
BS14657.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11106-RA | 135..473 | 17..355 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:13:13 Download gff for
BS14657.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11202382..11202720 | 17..355 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:45:02 Download gff for
BS14657.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11096415..11096753 | 17..355 | 100 | | Plus |
BS14657.pep Sequence
Translation from 16 to 354
> BS14657.pep
MVWNTLSFWDGQPVTSPVYPRMGDMWNPNTAGYQNYQHPQNHSHSNYFQR
MGMGDIRQMSCPMPNYCPQFREPGLDDVDAFYAYNGMDITQAYGGGSGAG
HGAGSGARGDFW*
BS14657.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:54:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11106-PB | 112 | CG11106-PB | 1..112 | 1..112 | 653 | 100 | Plus |
CG11106-PA | 112 | CG11106-PA | 1..112 | 1..112 | 653 | 100 | Plus |
CG15200-PA | 113 | CG15200-PA | 3..113 | 4..112 | 139 | 31.5 | Plus |