Clone Sequence Records
BS14661.3prime Sequence
594 bp (594 high quality bases) assembled on 2006-10-13
> BS14661.3prime
ATGGTCTAGAAAGCTTTTACAAGAAAATACGATGGAATTCGGGCTCATCC
ACTCCGCACAATGGGCATACCCTGCCAGTGTCGACAGCTCTCTTAATGCA
CGCTTTGCAGAAAACGTGGCCACAATTGGTGGACACTGGTAGCTTCTCGC
GGACATCTTCCAGGCACACAGGGCAGTTGTAGGGCAAGACAGATTTCTTG
GACTCCTCGTCATCTGATTTGATCCGTTTGTTGGGAGGAGAATCCTCGTT
TGAATCTGAGGATTCTGTATGTCCCATTGGTGTTGATGATTCGGTGGAGC
TCATACTGCTATCGAAGCTAATGCTGGTCGATGAGCTTTCACTATCACTG
GAACTAGACGACTCTGAGTCGCTGGAATACTCCAACAGGAATGGGGTTCT
GTCGATAGATCTGCTGCTGCTTGAGGAGTCCGAGTCTCCGTAATACTCAT
TTGGATTCCGCTCAGAGGAACCGCTGAGTAAGCGGGATCTTAATCCGGAG
GGCGCGAGTACGGGAGTGGGCCCGGTGTTATGGATTCGCTGTGATACTCC
AGAATTATTCGAGGTCCTGAAGTTTTCCATGTCGACTGATAACT
BS14661.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:51:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15150-PA | 564 | elfless-RA | 1..564 | 580..17 | 2820 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:16:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
elfless-RC | 1376 | CG15150-RC | 226..789 | 580..17 | 2820 | 100 | Minus |
elfless-RB | 1643 | CG15150-RB | 226..789 | 580..17 | 2820 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:16:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18010497..18010866 | 17..386 | 1850 | 100 | Plus |
2L | 23513712 | 2L | 18011077..18011194 | 463..580 | 590 | 100 | Plus |
2L | 23513712 | 2L | 18010934..18011011 | 386..463 | 390 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 11:16:42 has no hits.
BS14661.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:55:00 Download gff for
BS14661.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15150-PA | 1..564 | 17..580 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:46:48 Download gff for
BS14661.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
elfless-RB | 222..789 | 17..585 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:29:47 Download gff for
BS14661.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
elfless-RB | 222..789 | 17..585 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:29:47 Download gff for
BS14661.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18010497..18010865 | 17..385 | 100 | <- | Plus |
2L | 18010934..18011011 | 386..463 | 100 | <- | Plus |
2L | 18011078..18011198 | 464..585 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:46:48 Download gff for
BS14661.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18010497..18010865 | 17..385 | 100 | <- | Plus |
arm_2L | 18010934..18011011 | 386..463 | 100 | <- | Plus |
arm_2L | 18011078..18011198 | 464..585 | 98 | | Plus |
BS14661.5prime Sequence
594 bp (594 high quality bases) assembled on 2006-10-13
> BS14661.5prime
GAAGTTATCAGTCGACATGGAAAACTTCAGGACCTCGAATAATTCTGGAG
TATCACAGCGAATCCATAACACCGGGCCCACTCCCGTACTCGCGCCCTCC
GGATTAAGATCCCGCTTACTCAGCGGTTCCTCTGAGCGGAATCCAAATGA
GTATTACGGAGACTCGGACTCCTCAAGCAGCAGCAGATCTATCGACAGAA
CCCCATTCCTGTTGGAGTATTCCAGCGACTCAGAGTCGTCTAGTTCCAGT
GATAGTGAAAGCTCATCGACCAGCATTAGCTTCGATAGCAGTATGAGCTC
CACCGAATCATCAACACCAATGGGACATACAGAATCCTCAGATTCAAACG
AGGATTCTCCTCCCAACAAACGGATCAAATCAGATGACGAGGAGTCCAAG
AAATCTGTCTTGCCCTACAACTGCCCTGTGTGCCTGGAAGATGTCCGCGA
GAAGCTACCAGTGTCCACCAATTGTGGCCACGTTTTCTGCAAAGCGTGCA
TTAAGAGAGCTGTCGACACTGGCAGGGTATGCCCATTGTGCGGAGTGGAT
GAGCCCGAATTCCATCGTATTTTCTTGTAAAAGCTTTCTAGACC
BS14661.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:51:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15150-PA | 564 | elfless-RA | 1..564 | 17..580 | 2820 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 10:31:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
elfless-RC | 1376 | CG15150-RC | 226..789 | 17..580 | 2820 | 100 | Plus |
elfless-RB | 1643 | CG15150-RB | 226..789 | 17..580 | 2820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 10:30:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18010497..18010866 | 580..211 | 1850 | 100 | Minus |
2L | 23513712 | 2L | 18011077..18011194 | 134..17 | 590 | 100 | Minus |
2L | 23513712 | 2L | 18010934..18011011 | 211..134 | 390 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-06 10:30:59 has no hits.
BS14661.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:55:00 Download gff for
BS14661.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15150-PA | 1..564 | 17..580 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:42:26 Download gff for
BS14661.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
elfless-RB | 222..789 | 12..580 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:27:01 Download gff for
BS14661.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
elfless-RB | 222..789 | 12..580 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:27:01 Download gff for
BS14661.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18011078..18011198 | 12..133 | 98 | | Minus |
2L | 18010497..18010865 | 212..580 | 100 | <- | Minus |
2L | 18010934..18011011 | 134..211 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:42:26 Download gff for
BS14661.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18010497..18010865 | 212..580 | 100 | <- | Minus |
arm_2L | 18010934..18011011 | 134..211 | 100 | <- | Minus |
arm_2L | 18011078..18011198 | 12..133 | 98 | | Minus |
BS14661.complete Sequence
596 bp assembled on 2006-11-01
GenBank Submission: FJ637748
> BS14661.complete
GAAGTTATCAGTCGACATGGAAAACTTCAGGACCTCGAATAATTCTGGAG
TATCACAGCGAATCCATAACACCGGGCCCACTCCCGTACTCGCGCCCTCC
GGATTAAGATCCCGCTTACTCAGCGGTTCCTCTGAGCGGAATCCAAATGA
GTATTACGGAGACTCGGACTCCTCAAGCAGCAGCAGATCTATCGACAGAA
CCCCATTCCTGTTGGAGTATTCCAGCGACTCAGAGTCGTCTAGTTCCAGT
GATAGTGAAAGCTCATCGACCAGCATTAGCTTCGATAGCAGTATGAGCTC
CACCGAATCATCAACACCAATGGGACATACAGAATCCTCAGATTCAAACG
AGGATTCTCCTCCCAACAAACGGATCAAATCAGATGACGAGGAGTCCAAG
AAATCTGTCTTGCCCTACAACTGCCCTGTGTGCCTGGAAGATGTCCGCGA
GAAGCTACCAGTGTCCACCAATTGTGGCCACGTTTTCTGCAAAGCGTGCA
TTAAGAGAGCTGTCGACACTGGCAGGGTATGCCCATTGTGCGGAGTGGAT
GAGCCCGAATTCCATCGTATTTTCTTGTAAAAGCTTTCTAGACCAT
BS14661.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:41:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
elfless-RC | 690 | CG15150-PC | 127..690 | 17..580 | 2820 | 100 | Plus |
elfless-RB | 690 | CG15150-PB | 127..690 | 17..580 | 2820 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:41:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
elfless-RC | 1376 | CG15150-RC | 226..789 | 17..580 | 2820 | 100 | Plus |
elfless-RB | 1643 | CG15150-RB | 226..789 | 17..580 | 2820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:41:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18010497..18010866 | 580..211 | 1850 | 100 | Minus |
2L | 23513712 | 2L | 18011077..18011194 | 134..17 | 590 | 100 | Minus |
2L | 23513712 | 2L | 18010934..18011011 | 211..134 | 390 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:41:23 has no hits.
BS14661.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:35:48 Download gff for
BS14661.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
elfless-RA | 1..564 | 17..580 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:08:48 Download gff for
BS14661.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
elfless-RA | 12..579 | 12..580 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:31:42 Download gff for
BS14661.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
elfless-RB | 226..787 | 17..578 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:35:49 Download gff for
BS14661.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
elfless-RA | 12..579 | 12..580 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:50:41 Download gff for
BS14661.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
elfless-RB | 226..787 | 17..578 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:50:41 Download gff for
BS14661.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18010499..18010865 | 212..578 | 100 | <- | Minus |
2L | 18010934..18011011 | 134..211 | 100 | <- | Minus |
2L | 18011078..18011194 | 17..133 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:31:42 Download gff for
BS14661.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18010499..18010865 | 212..578 | 100 | <- | Minus |
arm_2L | 18010934..18011011 | 134..211 | 100 | <- | Minus |
arm_2L | 18011078..18011194 | 17..133 | 100 | | Minus |
BS14661.pep Sequence
Translation from 16 to 579
> BS14661.pep
MENFRTSNNSGVSQRIHNTGPTPVLAPSGLRSRLLSGSSERNPNEYYGDS
DSSSSSRSIDRTPFLLEYSSDSESSSSSDSESSSTSISFDSSMSSTESST
PMGHTESSDSNEDSPPNKRIKSDDEESKKSVLPYNCPVCLEDVREKLPVS
TNCGHVFCKACIKRAVDTGRVCPLCGVDEPEFHRIFL*
BS14661.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:09:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
elfless-PC | 229 | CG15150-PC | 43..229 | 1..187 | 974 | 100 | Plus |
elfless-PB | 229 | CG15150-PB | 43..229 | 1..187 | 974 | 100 | Plus |
dgrn-PD | 205 | CG10981-PD | 127..205 | 109..187 | 182 | 44.4 | Plus |
dgrn-PB | 312 | CG10981-PB | 234..312 | 109..187 | 182 | 44.4 | Plus |
dgrn-PA | 319 | CG10981-PA | 241..319 | 109..187 | 182 | 44.4 | Plus |