Clone Sequence Records
BS14665.3prime Sequence
823 bp (681 high quality bases) assembled on 2006-10-13
> BS14665.3prime
ATGGTCTAGAAAGCTTCTAGGGAATGGGTGTTTGGGATTCCTCGACGGTT
CGCAGCCATGCACAGTTAAGGATCTCGCGTAGATTCCAGCGAGCATGTGC
CTCCGGTTCGAGCAGCACTGAAACAGTGGCCTTCGCCTGGGCCGATATCG
TTTCCTGCAGCTTCCGGCGAAAGGCAAACTTGCGGTTACGCTGATCCTCC
AGCAATTTGGTCAAGTTACTGTCATCGAAAGGCATCTTGGCATTCATCAT
GATGAACAGAATGACTCCCAAGGACCAGGCGTCCGCTAGCTTTGGATCAT
ATGGTCGTCCACAAACTACTTCAGGTGCAGCATAAGCAGCTGATCCGCAG
TATGTCTCAGATTTCATCTCCCGGCCATTATCGTCGCGACAATAGCGAGC
AAATCCGAAATCGGCCAGCTTGATGTTGAGCCGCTTGGAGAGAAGAATGT
TCTCGCACTTGAGATCCCGATGGGCAATGTCCAGGTTGTGCAGATACTTC
AGTGCCTTGGACATCTGAAAGAACCAGATCTTCGATTGCTTCTCATCGAT
GGGACCCGACCTCTTGATGTGCGACAACAAATCCCCATTCTCTGCGTAAC
GCATAAAGATGAAGATCTTGGGACCGCGCTGAAGGATGCTATGGATCTGA
ATAATGTTGGAATGATCAATCTTTGTCAGGATCTCCAGTTCGCGCGGAAA
GAACTTGTTCACGAAATCAGTGGGCGCCTTGGCTTTGTCAATGATTTTAC
AGGCCAAATGTACTCCATGTCCATGATCATCGGCATAACCCGGCGGTTAT
AACAGTGGCATAAGACCCCTCGC
BS14665.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:51:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14305-PA | 909 | CG14305-RA | 136..909 | 790..17 | 3870 | 100 | Minus |
CG14305-PB | 909 | CG14305-RB | 136..909 | 790..17 | 3870 | 100 | Minus |
CG14305-PC | 909 | CG14305-RC | 136..909 | 790..17 | 3870 | 100 | Minus |
CG14305-PA | 909 | CG14305-RA | 104..137 | 823..790 | 170 | 100 | Minus |
CG14305-PB | 909 | CG14305-RB | 104..137 | 823..790 | 170 | 100 | Minus |
CG14305-PC | 909 | CG14305-RC | 104..137 | 823..790 | 170 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:39:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14305-RD | 1263 | CG14305-RD | 234..1041 | 823..15 | 4020 | 99.9 | Minus |
CG14305-RC | 1407 | CG14305-RC | 378..1185 | 823..15 | 4020 | 99.9 | Minus |
CG14305-RA | 1281 | CG14305-RA | 252..1059 | 823..15 | 4020 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:39:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18599068..18599875 | 823..15 | 3995 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-11 17:39:42 has no hits.
BS14665.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:55:02 Download gff for
BS14665.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14305-PC | 104..909 | 17..823 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:24:01 Download gff for
BS14665.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14305-RA | 252..1065 | 8..823 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:26:18 Download gff for
BS14665.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14305-RA | 252..1065 | 8..823 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:26:18 Download gff for
BS14665.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18599068..18599881 | 8..823 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:24:01 Download gff for
BS14665.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14424790..14425603 | 8..823 | 99 | | Minus |
BS14665.5prime Sequence
803 bp (713 high quality bases) assembled on 2006-10-13
> BS14665.5prime
GAAGTTATCAGTCGACATGTCCAAATACAATTCTAGCGCTGGGATCCGTC
AGTTGGGTACTCGAAGTTCGGATGTGGATGCACTGGCACAGCGGGGCTAC
AATGTTGGTCACAAGATCGGCGAGGGGTCTTATGCCACTGTTATAACCGC
CGGTTATGCCGATGATCATGGACATGGAGTACATTTGGCCTGTAAAATCA
TTGACAAAGCCAAGGCGCCCACTGATTTCGTGAACAAGTTCTTTCCGCGC
GAACTGGAGATCCTGACAAAGATTGATCATTCCAACATTATTCAGATCCA
TAGCATCCTTCAGCGCGGTCCCAAGATCTTCATCTTTATGCGTTACGCAG
AGAATGGGGATTTGTTGTCGCACATCAAGAGGTCGGGTCCCATCGATGAG
AAGCAATCGAAGATCTGGTTCTTTCAGATGTCCAAGGCACTGAAGTATCT
GCACAACCTGGACATTGCCCATCGGGATCTCAAGTGCGAGAACATTCTTC
TCTCCAAGCGGCTCAACATCAAGCTGGCCGATTTCGGATTTGCTCGCTAT
TGTCGCGACGATAATGGCCGGGAGATGAAATCTGAGACATACTGCGGATC
AGCTGCTTATGCTGCACCTGAAGTAGTTTGTGGACGACCATATGATCCAA
AGCTAGCGGACGCCTGGTCCTTGGGAGTCATTCTGTTCATCATGATGAAT
GCCAAGATGCCTTTCGATGACAGTAACTTGACCAAATTGCTGGAGGATCA
GCGTAACCGCAAGTTTGCCTTTTCCCGGAAGCTGCAAGAAACGATATCGG
CCC
BS14665.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:51:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14305-PA | 909 | CG14305-RA | 1..787 | 17..803 | 3835 | 99.4 | Plus |
CG14305-PB | 909 | CG14305-RB | 1..787 | 17..803 | 3835 | 99.4 | Plus |
CG14305-PC | 909 | CG14305-RC | 1..787 | 17..803 | 3835 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:58:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14305-RD | 1263 | CG14305-RD | 130..917 | 16..803 | 3880 | 99.5 | Plus |
CG14305-RC | 1407 | CG14305-RC | 274..1061 | 16..803 | 3880 | 99.5 | Plus |
CG14305-RA | 1281 | CG14305-RA | 148..935 | 16..803 | 3880 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 17:58:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18598964..18599751 | 16..803 | 3880 | 99.5 | Plus |
Blast to na_te.dros performed on 2015-01-30 17:58:47 has no hits.
BS14665.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:55:03 Download gff for
BS14665.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14305-PC | 1..787 | 17..803 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:52:37 Download gff for
BS14665.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14305-RA | 143..935 | 10..803 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:07:07 Download gff for
BS14665.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14305-RA | 143..935 | 10..803 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:07:07 Download gff for
BS14665.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18598959..18599751 | 10..803 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:52:37 Download gff for
BS14665.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14424681..14425473 | 10..803 | 99 | | Plus |
BS14665.complete Sequence
941 bp assembled on 2006-11-01
GenBank Submission: FJ637750
> BS14665.complete
GAAGTTATCAGTCGACATGTCCAAATACAATTCTAGCGCTGGGATCCGTC
AGTTGGGTACTCGAAGTTCGGATGTGGATGCACTGGCACAGCGGGGCTAC
AATGTTGGTCACAAGATCGGCGAGGGGTCTTATGCCACTGTTATAACCGC
CGGTTATGCCGATGATCATGGACATGGAGTACATTTGGCCTGTAAAATCA
TTGACAAAGCCAAGGCGCCCACTGATTTCGTGAACAAGTTCTTTCCGCGC
GAACTGGAGATCCTGACAAAGATTGATCATTCCAACATTATTCAGATCCA
TAGCATCCTTCAGCGCGGTCCCAAGATCTTCATCTTTATGCGTTACGCAG
AGAATGGGGATTTGTTGTCGCACATCAAGAGGTCGGGTCCCATCGATGAG
AAGCAATCGAAGATCTGGTTCTTTCAGATGTCCAAGGCACTGAAGTATCT
GCACAACCTGGACATTGCCCATCGGGATCTCAAGTGCGAGAACATTCTTC
TCTCCAAGCGGCTCAACATCAAGCTGGCCGATTTCGGATTTGCTCGCTAT
TGTCGCGACGATAATGGCCGGGAGATGAAATCTGAGACATACTGCGGATC
AGCTGCTTATGCTGCACCTGAAGTAGTTTGTGGACGACCATATGATCCAA
AGCTAGCGGACGCCTGGTCCTTGGGAGTCATTCTGTTCATCATGATGAAT
GCCAAGATGCCTTTCGATGACAGTAACTTGACCAAATTGCTGGAGGATCA
GCGTAACCGCAAGTTTGCCTTTCGCCGGAAGCTGCAGGAAACGATATCGG
CCCAGGCGAAGGCCACTGTTTCAGTGCTGCTCGAACCGGAGGCACATGCT
CGCTGGAATCTACGCGAGATCCTTAACTGTGCATGGCTGCGAACCGTCGA
GGAATCCCAAACACCCATTCCCTAGAAGCTTTCTAGACCAT
BS14665.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:57:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14305-RD | 909 | CG14305-PD | 1..909 | 17..925 | 4530 | 99.9 | Plus |
CG14305-RC | 909 | CG14305-PC | 1..909 | 17..925 | 4530 | 99.9 | Plus |
CG14305-RA | 909 | CG14305-PA | 1..909 | 17..925 | 4530 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:57:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14305-RD | 1263 | CG14305-RD | 130..1041 | 16..927 | 4545 | 99.9 | Plus |
CG14305-RC | 1407 | CG14305-RC | 274..1185 | 16..927 | 4545 | 99.9 | Plus |
CG14305-RA | 1281 | CG14305-RA | 148..1059 | 16..927 | 4545 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:57:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18598964..18599875 | 16..927 | 4545 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:57:09 has no hits.
BS14665.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:35:50 Download gff for
BS14665.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14305-RC | 1..909 | 17..925 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:08:50 Download gff for
BS14665.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14305-RC | 153..1075 | 10..934 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:00:04 Download gff for
BS14665.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14305-RA | 149..1057 | 17..925 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:35:50 Download gff for
BS14665.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14305-RC | 153..1075 | 10..934 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:58:56 Download gff for
BS14665.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14305-RA | 149..1057 | 17..925 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:58:56 Download gff for
BS14665.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18598965..18599873 | 17..925 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:00:04 Download gff for
BS14665.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14424687..14425595 | 17..925 | 99 | | Plus |
BS14665.pep Sequence
Translation from 16 to 924
> BS14665.pep
MSKYNSSAGIRQLGTRSSDVDALAQRGYNVGHKIGEGSYATVITAGYADD
HGHGVHLACKIIDKAKAPTDFVNKFFPRELEILTKIDHSNIIQIHSILQR
GPKIFIFMRYAENGDLLSHIKRSGPIDEKQSKIWFFQMSKALKYLHNLDI
AHRDLKCENILLSKRLNIKLADFGFARYCRDDNGREMKSETYCGSAAYAA
PEVVCGRPYDPKLADAWSLGVILFIMMNAKMPFDDSNLTKLLEDQRNRKF
AFRRKLQETISAQAKATVSVLLEPEAHARWNLREILNCAWLRTVEESQTP
IP*
BS14665.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:09:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14305-PD | 302 | CG14305-PD | 1..302 | 1..302 | 1582 | 100 | Plus |
CG14305-PC | 302 | CG14305-PC | 1..302 | 1..302 | 1582 | 100 | Plus |
CG14305-PA | 302 | CG14305-PA | 1..302 | 1..302 | 1582 | 100 | Plus |
CG9222-PA | 337 | CG9222-PA | 71..332 | 23..290 | 482 | 36.4 | Plus |
Sik3-PA | 702 | CG15072-PA | 27..292 | 15..291 | 395 | 33.8 | Plus |