Clone BS14665 Report

Search the DGRC for BS14665

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:146
Well:65
Vector:pDNR-Dual
Associated Gene/TranscriptCG14305-RA
Protein status:BS14665.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14665.3prime Sequence

823 bp (681 high quality bases) assembled on 2006-10-13

> BS14665.3prime
ATGGTCTAGAAAGCTTCTAGGGAATGGGTGTTTGGGATTCCTCGACGGTT
CGCAGCCATGCACAGTTAAGGATCTCGCGTAGATTCCAGCGAGCATGTGC
CTCCGGTTCGAGCAGCACTGAAACAGTGGCCTTCGCCTGGGCCGATATCG
TTTCCTGCAGCTTCCGGCGAAAGGCAAACTTGCGGTTACGCTGATCCTCC
AGCAATTTGGTCAAGTTACTGTCATCGAAAGGCATCTTGGCATTCATCAT
GATGAACAGAATGACTCCCAAGGACCAGGCGTCCGCTAGCTTTGGATCAT
ATGGTCGTCCACAAACTACTTCAGGTGCAGCATAAGCAGCTGATCCGCAG
TATGTCTCAGATTTCATCTCCCGGCCATTATCGTCGCGACAATAGCGAGC
AAATCCGAAATCGGCCAGCTTGATGTTGAGCCGCTTGGAGAGAAGAATGT
TCTCGCACTTGAGATCCCGATGGGCAATGTCCAGGTTGTGCAGATACTTC
AGTGCCTTGGACATCTGAAAGAACCAGATCTTCGATTGCTTCTCATCGAT
GGGACCCGACCTCTTGATGTGCGACAACAAATCCCCATTCTCTGCGTAAC
GCATAAAGATGAAGATCTTGGGACCGCGCTGAAGGATGCTATGGATCTGA
ATAATGTTGGAATGATCAATCTTTGTCAGGATCTCCAGTTCGCGCGGAAA
GAACTTGTTCACGAAATCAGTGGGCGCCTTGGCTTTGTCAATGATTTTAC
AGGCCAAATGTACTCCATGTCCATGATCATCGGCATAACCCGGCGGTTAT
AACAGTGGCATAAGACCCCTCGC

BS14665.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:51:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG14305-PA 909 CG14305-RA 136..909 790..17 3870 100 Minus
CG14305-PB 909 CG14305-RB 136..909 790..17 3870 100 Minus
CG14305-PC 909 CG14305-RC 136..909 790..17 3870 100 Minus
CG14305-PA 909 CG14305-RA 104..137 823..790 170 100 Minus
CG14305-PB 909 CG14305-RB 104..137 823..790 170 100 Minus
CG14305-PC 909 CG14305-RC 104..137 823..790 170 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:39:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG14305-RD 1263 CG14305-RD 234..1041 823..15 4020 99.9 Minus
CG14305-RC 1407 CG14305-RC 378..1185 823..15 4020 99.9 Minus
CG14305-RA 1281 CG14305-RA 252..1059 823..15 4020 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:39:39
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18599068..18599875 823..15 3995 99.9 Minus
Blast to na_te.dros performed on 2015-02-11 17:39:42 has no hits.

BS14665.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:55:02 Download gff for BS14665.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14305-PC 104..909 17..823 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:24:01 Download gff for BS14665.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14305-RA 252..1065 8..823 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:26:18 Download gff for BS14665.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14305-RA 252..1065 8..823 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:26:18 Download gff for BS14665.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 18599068..18599881 8..823 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:24:01 Download gff for BS14665.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14424790..14425603 8..823 99   Minus

BS14665.5prime Sequence

803 bp (713 high quality bases) assembled on 2006-10-13

> BS14665.5prime
GAAGTTATCAGTCGACATGTCCAAATACAATTCTAGCGCTGGGATCCGTC
AGTTGGGTACTCGAAGTTCGGATGTGGATGCACTGGCACAGCGGGGCTAC
AATGTTGGTCACAAGATCGGCGAGGGGTCTTATGCCACTGTTATAACCGC
CGGTTATGCCGATGATCATGGACATGGAGTACATTTGGCCTGTAAAATCA
TTGACAAAGCCAAGGCGCCCACTGATTTCGTGAACAAGTTCTTTCCGCGC
GAACTGGAGATCCTGACAAAGATTGATCATTCCAACATTATTCAGATCCA
TAGCATCCTTCAGCGCGGTCCCAAGATCTTCATCTTTATGCGTTACGCAG
AGAATGGGGATTTGTTGTCGCACATCAAGAGGTCGGGTCCCATCGATGAG
AAGCAATCGAAGATCTGGTTCTTTCAGATGTCCAAGGCACTGAAGTATCT
GCACAACCTGGACATTGCCCATCGGGATCTCAAGTGCGAGAACATTCTTC
TCTCCAAGCGGCTCAACATCAAGCTGGCCGATTTCGGATTTGCTCGCTAT
TGTCGCGACGATAATGGCCGGGAGATGAAATCTGAGACATACTGCGGATC
AGCTGCTTATGCTGCACCTGAAGTAGTTTGTGGACGACCATATGATCCAA
AGCTAGCGGACGCCTGGTCCTTGGGAGTCATTCTGTTCATCATGATGAAT
GCCAAGATGCCTTTCGATGACAGTAACTTGACCAAATTGCTGGAGGATCA
GCGTAACCGCAAGTTTGCCTTTTCCCGGAAGCTGCAAGAAACGATATCGG
CCC

BS14665.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:51:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG14305-PA 909 CG14305-RA 1..787 17..803 3835 99.4 Plus
CG14305-PB 909 CG14305-RB 1..787 17..803 3835 99.4 Plus
CG14305-PC 909 CG14305-RC 1..787 17..803 3835 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:58:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG14305-RD 1263 CG14305-RD 130..917 16..803 3880 99.5 Plus
CG14305-RC 1407 CG14305-RC 274..1061 16..803 3880 99.5 Plus
CG14305-RA 1281 CG14305-RA 148..935 16..803 3880 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 17:58:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18598964..18599751 16..803 3880 99.5 Plus
Blast to na_te.dros performed on 2015-01-30 17:58:47 has no hits.

BS14665.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:55:03 Download gff for BS14665.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14305-PC 1..787 17..803 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:52:37 Download gff for BS14665.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14305-RA 143..935 10..803 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:07:07 Download gff for BS14665.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14305-RA 143..935 10..803 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:07:07 Download gff for BS14665.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 18598959..18599751 10..803 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:52:37 Download gff for BS14665.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14424681..14425473 10..803 99   Plus

BS14665.complete Sequence

941 bp assembled on 2006-11-01

GenBank Submission: FJ637750

> BS14665.complete
GAAGTTATCAGTCGACATGTCCAAATACAATTCTAGCGCTGGGATCCGTC
AGTTGGGTACTCGAAGTTCGGATGTGGATGCACTGGCACAGCGGGGCTAC
AATGTTGGTCACAAGATCGGCGAGGGGTCTTATGCCACTGTTATAACCGC
CGGTTATGCCGATGATCATGGACATGGAGTACATTTGGCCTGTAAAATCA
TTGACAAAGCCAAGGCGCCCACTGATTTCGTGAACAAGTTCTTTCCGCGC
GAACTGGAGATCCTGACAAAGATTGATCATTCCAACATTATTCAGATCCA
TAGCATCCTTCAGCGCGGTCCCAAGATCTTCATCTTTATGCGTTACGCAG
AGAATGGGGATTTGTTGTCGCACATCAAGAGGTCGGGTCCCATCGATGAG
AAGCAATCGAAGATCTGGTTCTTTCAGATGTCCAAGGCACTGAAGTATCT
GCACAACCTGGACATTGCCCATCGGGATCTCAAGTGCGAGAACATTCTTC
TCTCCAAGCGGCTCAACATCAAGCTGGCCGATTTCGGATTTGCTCGCTAT
TGTCGCGACGATAATGGCCGGGAGATGAAATCTGAGACATACTGCGGATC
AGCTGCTTATGCTGCACCTGAAGTAGTTTGTGGACGACCATATGATCCAA
AGCTAGCGGACGCCTGGTCCTTGGGAGTCATTCTGTTCATCATGATGAAT
GCCAAGATGCCTTTCGATGACAGTAACTTGACCAAATTGCTGGAGGATCA
GCGTAACCGCAAGTTTGCCTTTCGCCGGAAGCTGCAGGAAACGATATCGG
CCCAGGCGAAGGCCACTGTTTCAGTGCTGCTCGAACCGGAGGCACATGCT
CGCTGGAATCTACGCGAGATCCTTAACTGTGCATGGCTGCGAACCGTCGA
GGAATCCCAAACACCCATTCCCTAGAAGCTTTCTAGACCAT

BS14665.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:57:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG14305-RD 909 CG14305-PD 1..909 17..925 4530 99.9 Plus
CG14305-RC 909 CG14305-PC 1..909 17..925 4530 99.9 Plus
CG14305-RA 909 CG14305-PA 1..909 17..925 4530 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:57:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG14305-RD 1263 CG14305-RD 130..1041 16..927 4545 99.9 Plus
CG14305-RC 1407 CG14305-RC 274..1185 16..927 4545 99.9 Plus
CG14305-RA 1281 CG14305-RA 148..1059 16..927 4545 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:57:08
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18598964..18599875 16..927 4545 99.9 Plus
Blast to na_te.dros performed on 2014-11-27 06:57:09 has no hits.

BS14665.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:35:50 Download gff for BS14665.complete
Subject Subject Range Query Range Percent Splice Strand
CG14305-RC 1..909 17..925 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:08:50 Download gff for BS14665.complete
Subject Subject Range Query Range Percent Splice Strand
CG14305-RC 153..1075 10..934 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:00:04 Download gff for BS14665.complete
Subject Subject Range Query Range Percent Splice Strand
CG14305-RA 149..1057 17..925 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:35:50 Download gff for BS14665.complete
Subject Subject Range Query Range Percent Splice Strand
CG14305-RC 153..1075 10..934 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:58:56 Download gff for BS14665.complete
Subject Subject Range Query Range Percent Splice Strand
CG14305-RA 149..1057 17..925 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:58:56 Download gff for BS14665.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18598965..18599873 17..925 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:00:04 Download gff for BS14665.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14424687..14425595 17..925 99   Plus

BS14665.pep Sequence

Translation from 16 to 924

> BS14665.pep
MSKYNSSAGIRQLGTRSSDVDALAQRGYNVGHKIGEGSYATVITAGYADD
HGHGVHLACKIIDKAKAPTDFVNKFFPRELEILTKIDHSNIIQIHSILQR
GPKIFIFMRYAENGDLLSHIKRSGPIDEKQSKIWFFQMSKALKYLHNLDI
AHRDLKCENILLSKRLNIKLADFGFARYCRDDNGREMKSETYCGSAAYAA
PEVVCGRPYDPKLADAWSLGVILFIMMNAKMPFDDSNLTKLLEDQRNRKF
AFRRKLQETISAQAKATVSVLLEPEAHARWNLREILNCAWLRTVEESQTP
IP*

BS14665.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:09:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG14305-PD 302 CG14305-PD 1..302 1..302 1582 100 Plus
CG14305-PC 302 CG14305-PC 1..302 1..302 1582 100 Plus
CG14305-PA 302 CG14305-PA 1..302 1..302 1582 100 Plus
CG9222-PA 337 CG9222-PA 71..332 23..290 482 36.4 Plus
Sik3-PA 702 CG15072-PA 27..292 15..291 395 33.8 Plus