Clone Sequence Records
BS14668.3prime Sequence
690 bp (690 high quality bases) assembled on 2006-10-13
> BS14668.3prime
ATGGTCTAGAAAGCTTTTAAAAATTCGGGACATTCCTTAGCCAGGAGGGG
GACTTGCTGACCGAGGATTCGACCTTTATTGGCGGGGACTCTGCTGATTC
GGGCGGCATCAGGGCCTTCTTGTGCAACTGGAAGCCATAGATACGGGGGA
TGTACTTCTCCACGGGCGGAGAGGGTATCAAGCTCGGCAGCTGCATAAAG
AACATATGCGGGAAGCTGGTCCCGAACATGGCTCCGTCCAGCATTCCATT
GTGGGGTAGCGGGATGTAGACGTTGTTACAGCTAGGGCAATAGATCTTAA
CTTGGGCCTTGTCCCACACGTCGTGAAGGCCCACTGGCAGGACTTTCTGC
CTCTTACAAAAGACTCTCGGACACGATCCGAAGTCCCCCCTTTCGTACTT
TAATCGCATATCTTCAATGCCACGCGGCGAAACGATGTACCGTGCATGGA
TCATGCCATACAGCTTCTTCTCTTCGGCGCAGTCCCAGTCCTCGTTGTCG
AACTCCGGATCTAAGACTACCTCCAGTGTCTGGCTATCGAACTCCAGGCC
CGTCAGATTGAACTTGTCCTGGATGTATTCATTGGGCACCCGGCAGGAGA
ATTCGTGGCCCTTGATTCCCAGGAACCAATCGATCCAACTGCCATCTGGT
ATCTCGATGCTCCTGGGACACGACATGTCGACTGATAACT
BS14668.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:51:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13591-PA | 660 | Ssl-RA | 1..660 | 676..17 | 3250 | 99.6 | Minus |
CG13591-PB | 660 | Ssl-RB | 1..660 | 676..17 | 3250 | 99.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:59:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ssl-RA | 908 | CG13591-RA | 75..735 | 677..17 | 3275 | 99.7 | Minus |
CG40635-RB | 264 | CG40635-RB | 33..264 | 647..419 | 270 | 75 | Minus |
SteXh:CG42398-RA | 615 | CG42398-RA | 56..157 | 642..541 | 225 | 81.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 17:59:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24499603..24500124 | 144..665 | 2595 | 99.8 | Plus |
2R | 25286936 | 2R | 24499416..24499543 | 17..144 | 625 | 99.2 | Plus |
U | 3151297 | U | 827697..827923 | 145..374 | 365 | 78.3 | Plus |
U | 3151297 | U | 2799521..2799748 | 374..144 | 355 | 77.9 | Minus |
Ymm | 880023 | Ymm | 679391..679566 | 173..358 | 325 | 79.6 | Plus |
U | 3151297 | U | 2799841..2800079 | 385..144 | 320 | 76.4 | Minus |
U | 3151297 | U | 2799244..2799418 | 321..144 | 315 | 79.8 | Minus |
U | 3151297 | U | 828079..828252 | 144..320 | 310 | 79.7 | Plus |
U | 3151297 | U | 2889733..2890168 | 628..173 | 285 | 72.3 | Minus |
U | 3151297 | U | 1942917..1942985 | 173..241 | 225 | 88.4 | Plus |
U | 3151297 | U | 2792304..2792454 | 497..647 | 200 | 75.5 | Plus |
Blast to na_te.dros performed on 2015-01-30 17:59:24 has no hits.
BS14668.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:55:05 Download gff for
BS14668.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13591-PB | 1..660 | 17..676 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:52:43 Download gff for
BS14668.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ssl-RA | 62..737 | 12..688 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:07:14 Download gff for
BS14668.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ssl-RA | 62..737 | 12..688 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:07:14 Download gff for
BS14668.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24499414..24499542 | 12..143 | 96 | <- | Plus |
2R | 24499603..24500124 | 144..665 | 99 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:52:43 Download gff for
BS14668.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20386937..20387065 | 12..143 | 96 | <- | Plus |
arm_2R | 20387126..20387647 | 144..665 | 99 | <- | Plus |
BS14668.5prime Sequence
690 bp (690 high quality bases) assembled on 2006-10-13
> BS14668.5prime
GAAGTTATCAGTCGACATGTCGTGTCCCAGGAGCATCGAGATACCAGATG
GCAGTTGGATCGATTGGTTCCTGGGAATCAAGGGCCACGAATTCTCCTGC
CGGGTGCCCAATGAATACATCCAGGACAAGTTCAATCTGACGGGCCTGGA
GTTCGATAGCCAGACACTGGAGGTAGTCTTAGATCCGGAGTTCGACAACG
AGGACTGGGACTGCGCCGAAGAGAAGAAGCTGTATGGCATGATCCATGCA
CGGTACATCGTTTCGCCGCGTGGCATTGAAGATATGCGATTAAAGTACGA
AAGGGGGGACTTCGGATCGTGTCCGAGAGTCTTTTGTAAGAGGCAGAAAG
TCCTGCCAGTGGGCCTTCACGACGTGTGGGACAAGGCCCAAGTTAAGATC
TATTGCCCTAGCTGTAACAACGTCTACATCCCGCTACCCCACAATGGAAT
GCTGGACGGAGCCATGTTCGGGACCAGCTTCCCGCATATGTTCTTTATGC
AGCTGCCGAGCTTGATACCCTCTCCGCCCGTGGAGAAGTACATCCCCCGT
ATCTATGGCTTCCAGTTGCACAAGAAGGCCCTGATGCCGCCCGAATCAGC
AGAGTCCCCGCCAATAAAGGTCGAATCCTCGGTCAGCAAGTCCCCCTCCT
GGCTAAGGAATGTCCCGAATTTTTAAAAGCTTTCTAGACC
BS14668.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:51:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13591-PA | 660 | Ssl-RA | 1..660 | 17..676 | 3250 | 99.6 | Plus |
CG13591-PB | 660 | Ssl-RB | 1..660 | 17..676 | 3250 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:07:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ssl-RA | 908 | CG13591-RA | 75..735 | 16..676 | 3275 | 99.7 | Plus |
CG40635-RB | 264 | CG40635-RB | 33..264 | 46..274 | 270 | 75 | Plus |
SteXh:CG42398-RA | 615 | CG42398-RA | 56..157 | 51..152 | 225 | 81.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:07:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24499603..24500124 | 549..28 | 2595 | 99.8 | Minus |
2R | 25286936 | 2R | 24499416..24499543 | 676..549 | 625 | 99.2 | Minus |
U | 3151297 | U | 827697..827923 | 548..319 | 365 | 78.3 | Minus |
U | 3151297 | U | 2799521..2799748 | 319..549 | 355 | 77.9 | Plus |
Ymm | 880023 | Ymm | 679391..679566 | 520..335 | 325 | 79.6 | Minus |
U | 3151297 | U | 2799841..2800079 | 308..549 | 320 | 76.4 | Plus |
U | 3151297 | U | 2799244..2799418 | 372..549 | 315 | 79.8 | Plus |
U | 3151297 | U | 828079..828252 | 549..373 | 310 | 79.7 | Minus |
U | 3151297 | U | 2889733..2890168 | 65..520 | 285 | 72.3 | Plus |
U | 3151297 | U | 1942917..1942985 | 520..452 | 225 | 88.4 | Minus |
U | 3151297 | U | 2792304..2792454 | 196..46 | 200 | 75.5 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:07:06 has no hits.
BS14668.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:55:05 Download gff for
BS14668.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13591-PB | 1..660 | 17..676 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:23:11 Download gff for
BS14668.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ssl-RA | 62..737 | 5..681 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:07:12 Download gff for
BS14668.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ssl-RA | 62..737 | 5..681 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:07:12 Download gff for
BS14668.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24499414..24499542 | 550..681 | 96 | <- | Minus |
2R | 24499603..24500124 | 28..549 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:23:11 Download gff for
BS14668.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20386937..20387065 | 550..681 | 96 | <- | Minus |
arm_2R | 20387126..20387647 | 28..549 | 99 | <- | Minus |
BS14668.complete Sequence
692 bp assembled on 2006-11-01
GenBank Submission: FJ637751
> BS14668.complete
GAAGTTATCAGTCGACATGTCGTGTCCCAGGAGCATCGAGATACCAGATG
GCAGTTGGATCGATTGGTTCCTGGGAATCAAGGGCCACGAATTCTCCTGC
CGGGTGCCCAATGAATACATCCAGGACAAGTTCAATCTGACGGGCCTGGA
GTTCGATAGCCAGACACTGGAGGTAGTCTTAGATCCGGAGTTCGACAACG
AGGACTGGGACTGCGCCGAAGAGAAGAAGCTGTATGGCATGATCCATGCA
CGGTACATCGTTTCGCCGCGTGGCATTGAAGATATGCGATTAAAGTACGA
AAGGGGGGACTTCGGATCGTGTCCGAGAGTCTTTTGTAAGAGGCAGAAAG
TCCTGCCAGTGGGCCTTCACGACGTGTGGGACAAGGCCCAAGTTAAGATC
TATTGCCCTAGCTGTAACAACGTCTACATCCCGCTACCCCACAATGGAAT
GCTGGACGGAGCCATGTTCGGGACCAGCTTCCCGCATATGTTCTTTATGC
AGCTGCCGAGCTTGATACCCTCTCCGCCCGTGGAGAAGTACATCCCCCGT
ATCTATGGCTTCCAGTTGCACAAGAAGGCCCTGATGCCGCCCGAATCAGC
AGAGTCCCCGCCAATAAAGGTCGAATCCTCGGTCAGCAAGTCCCCCTCCT
GGCTAAGGAATGTCCCGAATTTTTAAAAGCTTTCTAGACCAT
BS14668.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:46:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ssl-RA | 660 | CG13591-PA | 1..660 | 17..676 | 3270 | 99.7 | Plus |
SteXh:CG42398-RA | 519 | CG42398-PA | 26..127 | 51..152 | 225 | 81.4 | Plus |
CG40635-RB | 264 | CG40635-PB | 33..264 | 46..274 | 225 | 74.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:46:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ssl-RA | 908 | CG13591-RA | 75..735 | 16..676 | 3275 | 99.7 | Plus |
SteXh:CG42398-RA | 615 | CG42398-RA | 56..157 | 51..152 | 225 | 81.4 | Plus |
CG40635-RB | 264 | CG40635-RB | 33..264 | 46..274 | 225 | 74.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:46:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24499603..24500124 | 549..28 | 2595 | 99.8 | Minus |
2R | 25286936 | 2R | 24499416..24499543 | 676..549 | 625 | 99.2 | Minus |
U | 3151297 | U | 827697..827923 | 548..319 | 365 | 78.3 | Minus |
U | 3151297 | U | 2799521..2799748 | 319..549 | 355 | 77.9 | Plus |
Ymm | 880023 | Ymm | 679391..679566 | 520..335 | 325 | 79.6 | Minus |
U | 3151297 | U | 2799841..2800079 | 308..549 | 320 | 76.4 | Plus |
Ymm | 880023 | Ymm | 669241..669695 | 520..46 | 320 | 72.6 | Minus |
U | 3151297 | U | 2799244..2799418 | 372..549 | 315 | 79.8 | Plus |
U | 3151297 | U | 828079..828252 | 549..373 | 310 | 79.7 | Minus |
Ymm | 880023 | Ymm | 761189..761364 | 335..520 | 310 | 79 | Plus |
Ymm | 880023 | Ymm | 568419..568791 | 421..51 | 300 | 73.3 | Minus |
Y | 3667352 | Y | 846180..846552 | 51..421 | 300 | 73.3 | Plus |
Y | 3667352 | Y | 847951..848323 | 51..421 | 300 | 73.3 | Plus |
Y | 3667352 | Y | 2535261..2535633 | 51..421 | 300 | 73.3 | Plus |
Y | 3667352 | Y | 2540992..2541364 | 51..421 | 300 | 73.3 | Plus |
Y | 3667352 | Y | 2543861..2544233 | 51..421 | 300 | 73.3 | Plus |
Y | 3667352 | Y | 2546388..2546760 | 51..421 | 300 | 73.3 | Plus |
Y | 3667352 | Y | 2548916..2549288 | 51..421 | 300 | 73.3 | Plus |
Y | 3667352 | Y | 2551785..2552157 | 51..421 | 300 | 73.3 | Plus |
Y | 3667352 | Y | 2554654..2555026 | 51..421 | 300 | 73.3 | Plus |
Y | 3667352 | Y | 2559995..2560367 | 51..421 | 300 | 73.3 | Plus |
Y | 3667352 | Y | 2562865..2563237 | 51..421 | 300 | 73.3 | Plus |
Y | 3667352 | Y | 2565704..2566076 | 51..421 | 300 | 73.3 | Plus |
Y | 3667352 | Y | 2568543..2568915 | 51..421 | 300 | 73.3 | Plus |
Y | 3667352 | Y | 2571382..2571754 | 51..421 | 300 | 73.3 | Plus |
Y | 3667352 | Y | 2577058..2577430 | 51..421 | 300 | 73.3 | Plus |
Y | 3667352 | Y | 2579898..2580270 | 51..421 | 300 | 73.3 | Plus |
Y | 3667352 | Y | 2582730..2583102 | 51..421 | 300 | 73.3 | Plus |
Y | 3667352 | Y | 2585591..2585963 | 51..421 | 300 | 73.3 | Plus |
Y | 3667352 | Y | 2590941..2591313 | 51..421 | 300 | 73.3 | Plus |
Y | 3667352 | Y | 2593811..2594183 | 51..421 | 300 | 73.3 | Plus |
Y | 3667352 | Y | 2596650..2597022 | 51..421 | 300 | 73.3 | Plus |
Ymm | 880023 | Ymm | 415431..415600 | 520..341 | 295 | 78.9 | Minus |
Ymm | 880023 | Ymm | 424354..424529 | 520..335 | 295 | 78.5 | Minus |
U | 3151297 | U | 2889733..2890168 | 65..520 | 285 | 72.3 | Plus |
Y | 3667352 | Y | 912812..913184 | 51..421 | 285 | 73 | Plus |
Y | 3667352 | Y | 2520914..2521286 | 51..421 | 285 | 73 | Plus |
Y | 3667352 | Y | 2523789..2524161 | 51..421 | 285 | 73 | Plus |
Y | 3667352 | Y | 2526672..2527044 | 51..421 | 285 | 73 | Plus |
Y | 3667352 | Y | 2529555..2529927 | 51..421 | 285 | 73 | Plus |
Y | 3667352 | Y | 2532388..2532760 | 51..421 | 285 | 73 | Plus |
Y | 3667352 | Y | 2538123..2538495 | 51..421 | 285 | 73 | Plus |
Ymm | 880023 | Ymm | 411348..411715 | 425..46 | 280 | 73.4 | Minus |
Y | 3667352 | Y | 2588469..2588828 | 51..408 | 280 | 73.1 | Plus |
Y | 3667352 | Y | 876841..877209 | 51..417 | 280 | 73 | Plus |
Y | 3667352 | Y | 2557523..2557882 | 51..408 | 280 | 73.1 | Plus |
Ymm | 880023 | Ymm | 637598..637772 | 519..335 | 275 | 77.8 | Minus |
Ymm | 880023 | Ymm | 683596..683968 | 421..51 | 270 | 72.7 | Minus |
Ymm | 880023 | Ymm | 717784..718156 | 51..421 | 270 | 72.7 | Plus |
Ymm | 880023 | Ymm | 829102..829474 | 51..421 | 270 | 72.7 | Plus |
Y | 3667352 | Y | 847201..847573 | 51..421 | 270 | 72.7 | Plus |
Y | 3667352 | Y | 851751..852123 | 421..51 | 270 | 72.7 | Minus |
Y | 3667352 | Y | 854923..855295 | 51..421 | 270 | 72.7 | Plus |
Y | 3667352 | Y | 870667..871039 | 421..51 | 270 | 72.7 | Minus |
Y | 3667352 | Y | 872690..873062 | 421..51 | 270 | 72.7 | Minus |
Y | 3667352 | Y | 881085..881457 | 51..421 | 270 | 72.7 | Plus |
Y | 3667352 | Y | 905119..905491 | 421..51 | 270 | 72.7 | Minus |
Y | 3667352 | Y | 949424..949796 | 51..421 | 270 | 72.7 | Plus |
Y | 3667352 | Y | 1000738..1001110 | 421..51 | 270 | 72.7 | Minus |
Y | 3667352 | Y | 2503998..2504370 | 51..421 | 270 | 72.7 | Plus |
Y | 3667352 | Y | 2506867..2507239 | 51..421 | 270 | 72.7 | Plus |
Y | 3667352 | Y | 2509721..2510093 | 51..421 | 270 | 72.7 | Plus |
Y | 3667352 | Y | 2515169..2515541 | 51..421 | 270 | 72.7 | Plus |
Y | 3667352 | Y | 2518036..2518408 | 51..421 | 270 | 72.7 | Plus |
Ymm | 880023 | Ymm | 835858..836229 | 421..52 | 265 | 72.7 | Minus |
Y | 3667352 | Y | 1008103..1008474 | 52..421 | 265 | 72.7 | Plus |
Ymm | 880023 | Ymm | 159465..159834 | 46..425 | 255 | 72.3 | Plus |
Ymm | 880023 | Ymm | 677760..677828 | 520..452 | 255 | 91.3 | Minus |
Y | 3667352 | Y | 893865..894011 | 197..51 | 255 | 78.2 | Minus |
Y | 3667352 | Y | 910254..910626 | 421..51 | 255 | 72.5 | Minus |
Y | 3667352 | Y | 932282..932654 | 51..421 | 255 | 72.5 | Plus |
Ymm | 880023 | Ymm | 155775..156029 | 46..297 | 250 | 74.1 | Plus |
Ymm | 880023 | Ymm | 413440..413615 | 520..335 | 250 | 76.9 | Minus |
Ymm | 880023 | Ymm | 711004..711124 | 51..171 | 245 | 80.2 | Plus |
Y | 3667352 | Y | 954004..954124 | 171..51 | 245 | 80.2 | Minus |
U | 3151297 | U | 1942917..1942985 | 520..452 | 225 | 88.4 | Minus |
Ymm | 880023 | Ymm | 560498..560729 | 274..46 | 225 | 74.1 | Minus |
Xmm | 1049845 | Xmm | 581799..581900 | 51..152 | 225 | 81.4 | Plus |
X | 23542271 | X | 23317196..23317297 | 152..51 | 225 | 81.4 | Minus |
X | 23542271 | X | 23352530..23352631 | 152..51 | 225 | 81.4 | Minus |
2CEN | 225573 | 2CEN | 194169..194270 | 152..51 | 225 | 81.4 | Minus |
Ymm | 880023 | Ymm | 409253..409619 | 425..46 | 215 | 72.8 | Minus |
Ymm | 880023 | Ymm | 514678..514744 | 519..453 | 215 | 88.1 | Minus |
Ymm | 880023 | Ymm | 563133..563373 | 51..288 | 210 | 73.4 | Plus |
X | 23542271 | X | 14000292..14000393 | 51..152 | 210 | 80.4 | Plus |
X | 23542271 | X | 14047282..14047383 | 152..51 | 210 | 80.4 | Minus |
X | 23542271 | X | 14048521..14048622 | 152..51 | 210 | 80.4 | Minus |
X | 23542271 | X | 14049790..14049891 | 152..51 | 210 | 80.4 | Minus |
X | 23542271 | X | 14051059..14051160 | 152..51 | 210 | 80.4 | Minus |
X | 23542271 | X | 14052328..14052429 | 152..51 | 210 | 80.4 | Minus |
X | 23542271 | X | 14054867..14054968 | 152..51 | 210 | 80.4 | Minus |
X | 23542271 | X | 14056136..14056237 | 152..51 | 210 | 80.4 | Minus |
X | 23542271 | X | 14057405..14057506 | 152..51 | 210 | 80.4 | Minus |
X | 23542271 | X | 14058674..14058775 | 152..51 | 210 | 80.4 | Minus |
X | 23542271 | X | 14059944..14060045 | 152..51 | 210 | 80.4 | Minus |
X | 23542271 | X | 14061212..14061313 | 152..51 | 210 | 80.4 | Minus |
X | 23542271 | X | 23346572..23346673 | 152..51 | 210 | 80.4 | Minus |
U | 3151297 | U | 2792304..2792454 | 196..46 | 200 | 75.5 | Minus |
Ymm | 880023 | Ymm | 504134..504284 | 495..335 | 200 | 76.4 | Minus |
Ymm | 880023 | Ymm | 533379..533422 | 495..452 | 190 | 95.5 | Minus |
3CEN | 744266 | 3CEN | 409235..409292 | 520..463 | 185 | 87.9 | Minus |
X | 23542271 | X | 14053597..14053699 | 152..51 | 180 | 80.6 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:46:46 has no hits.
BS14668.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:35:51 Download gff for
BS14668.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ssl-RB | 1..660 | 17..676 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:08:52 Download gff for
BS14668.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ssl-RB | 26..701 | 5..681 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:22:33 Download gff for
BS14668.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ssl-RA | 76..733 | 17..674 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:35:51 Download gff for
BS14668.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ssl-RB | 26..701 | 5..681 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:16:46 Download gff for
BS14668.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ssl-RA | 76..733 | 17..674 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:16:46 Download gff for
BS14668.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24499418..24499542 | 550..674 | 99 | <- | Minus |
2R | 24499603..24500132 | 20..549 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:22:33 Download gff for
BS14668.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20386941..20387065 | 550..674 | 99 | <- | Minus |
arm_2R | 20387126..20387655 | 20..549 | 99 | | Minus |
BS14668.pep Sequence
Translation from 16 to 675
> BS14668.pep
MSCPRSIEIPDGSWIDWFLGIKGHEFSCRVPNEYIQDKFNLTGLEFDSQT
LEVVLDPEFDNEDWDCAEEKKLYGMIHARYIVSPRGIEDMRLKYERGDFG
SCPRVFCKRQKVLPVGLHDVWDKAQVKIYCPSCNNVYIPLPHNGMLDGAM
FGTSFPHMFFMQLPSLIPSPPVEKYIPRIYGFQLHKKALMPPESAESPPI
KVESSVSKSPSWLRNVPNF*
BS14668.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:08:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ssl-PA | 219 | CG13591-PA | 1..219 | 1..219 | 1210 | 100 | Plus |
SteXh:CG42398-PA | 172 | CG42398-PA | 8..163 | 11..166 | 471 | 58 | Plus |
CkIIbeta2-PA | 219 | CG8914-PA | 6..194 | 11..188 | 469 | 49.7 | Plus |
Ste:CG33238-PB | 172 | CG33238-PB | 3..163 | 6..166 | 468 | 56.2 | Plus |
Ste:CG33241-PB | 172 | CG33241-PB | 8..163 | 11..166 | 464 | 56.7 | Plus |