Clone Sequence Records
BS14682.3prime Sequence
540 bp (540 high quality bases) assembled on 2006-10-13
> BS14682.3prime
ATGGTCTAGAAAGCTTTTAAACCCTCTGTTCAAGAGCTCCATTTCCCTCT
TCCCCCGCAAAATTATCTACGGTCTTTGGTTTCTCAAATGGGACTAAATC
CTCGAAAGATCCATCGCCAGCTGCAGAATCTGGTGAATCAATAATCAGTT
GCTCCTTATTTGTGGAAGTATTCCACCATTTTGAATATTCTTTGTGACGC
AATTCCTTGGCCTTTTCCACCAAATCCAGACAGGTGACCTTGGCACCGTC
GGCCAATTCCTCCGAATAGTTGGGTATGTTTCGAATGATACGAAAAGTGC
CCTTCACTCCTTCATTGTAGTATTTCCGGGATAGCTCACCCACGCTCAGA
TCGCTCTCATCTAACTTCAGCGTTCGTCGCAGAAGTCCAAATACTGGTTG
AAGACCATTGGTGATCTGATCGAGCAGGTGGTCCGTCTCCTCTGTCTTAC
CCCAAACTCCAACTCGATTGGTTATGTAGACGGTCATCGAGACCGCTGCA
GTTCGATACATCAGTGTAGTAAACATGTCGACTGATAACT
BS14682.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:51:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15296-PA | 510 | CG15296-RA | 1..510 | 526..17 | 2550 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:10:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15296-RB | 686 | CG15296-RB | 40..550 | 526..16 | 2555 | 100 | Minus |
CG15296-RA | 690 | CG15296-RA | 44..554 | 526..16 | 2555 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:10:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 10565978..10566488 | 16..526 | 2555 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 17:10:25 has no hits.
BS14682.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:55:15 Download gff for
BS14682.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15296-PA | 1..510 | 17..526 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:23:43 Download gff for
BS14682.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15296-RA | 35..564 | 7..535 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:07:36 Download gff for
BS14682.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15296-RA | 35..564 | 7..535 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:07:36 Download gff for
BS14682.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10565968..10566497 | 7..535 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:23:43 Download gff for
BS14682.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 10460001..10460530 | 7..535 | 98 | | Plus |
BS14682.5prime Sequence
540 bp (540 high quality bases) assembled on 2006-10-13
> BS14682.5prime
GAAGTTATCAGTCGACATGTTTACTACACTGATGTATCGAACTGCAGCGG
TCTCGATGACCGTCTACATAACCAATCGAGTTGGAGTTTGGGGTAAGACA
GAGGAGACGGACCACCTGCTCGATCAGATCACCAATGGTCTTCAACCAGT
ATTTGGACTTCTGCGACGAACGCTGAAGTTAGATGAGAGCGATCTGAGCG
TGGGTGAGCTATCCCGGAAATACTACAATGAAGGAGTGAAGGGCACTTTT
CGTATCATTCGAAACATACCCAACTATTCGGAGGAATTGGCCGACGGTGC
CAAGGTCACCTGTCTGGATTTGGTGGAAAAGGCCAAGGAATTGCGTCACA
AAGAATATTCAAAATGGTGGAATACTTCCACAAATAAGGAGCAACTGATT
ATTGATTCACCAGATTCTGCAGCTGGCGATGGATCTTTCGAGGATTTAGT
CCCATTTGAGAAACCAAAGACCGTAGATAATTTTGCGGGGGAAGAGGGAA
ATGGAGCTCTTGAACAGAGGGTTTAAAAGCTTTCTAGACC
BS14682.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:51:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15296-PA | 510 | CG15296-RA | 1..510 | 17..526 | 2550 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:16:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15296-RB | 686 | CG15296-RB | 40..550 | 17..527 | 2555 | 100 | Plus |
CG15296-RA | 690 | CG15296-RA | 44..554 | 17..527 | 2555 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:16:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 10565978..10566488 | 527..17 | 2555 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-31 10:16:48 has no hits.
BS14682.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:55:15 Download gff for
BS14682.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15296-PA | 1..510 | 17..526 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:36:09 Download gff for
BS14682.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15296-RA | 35..564 | 8..536 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:45:18 Download gff for
BS14682.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15296-RA | 35..564 | 8..536 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:45:18 Download gff for
BS14682.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10565968..10566497 | 8..536 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:36:09 Download gff for
BS14682.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 10460001..10460530 | 8..536 | 98 | | Minus |
BS14682.complete Sequence
542 bp assembled on 2006-11-01
GenBank Submission: FJ637758
> BS14682.complete
GAAGTTATCAGTCGACATGTTTACTACACTGATGTATCGAACTGCAGCGG
TCTCGATGACCGTCTACATAACCAATCGAGTTGGAGTTTGGGGTAAGACA
GAGGAGACGGACCACCTGCTCGATCAGATCACCAATGGTCTTCAACCAGT
ATTTGGACTTCTGCGACGAACGCTGAAGTTAGATGAGAGCGATCTGAGCG
TGGGTGAGCTATCCCGGAAATACTACAATGAAGGAGTGAAGGGCACTTTT
CGTATCATTCGAAACATACCCAACTATTCGGAGGAATTGGCCGACGGTGC
CAAGGTCACCTGTCTGGATTTGGTGGAAAAGGCCAAGGAATTGCGTCACA
AAGAATATTCAAAATGGTGGAATACTTCCACAAATAAGGAGCAACTGATT
ATTGATTCACCAGATTCTGCAGCTGGCGATGGATCTTTCGAGGATTTAGT
CCCATTTGAGAAACCAAAGACCGTAGATAATTTTGCGGGGGAAGAGGGAA
ATGGAGCTCTTGAACAGAGGGTTTAAAAGCTTTCTAGACCAT
BS14682.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:39:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15296-RB | 510 | CG15296-PB | 1..510 | 17..526 | 2550 | 100 | Plus |
CG15296-RA | 510 | CG15296-PA | 1..510 | 17..526 | 2550 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:39:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15296-RB | 686 | CG15296-RB | 40..550 | 17..527 | 2555 | 100 | Plus |
CG15296-RA | 690 | CG15296-RA | 44..554 | 17..527 | 2555 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:39:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 10565978..10566488 | 527..17 | 2555 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:39:30 has no hits.
BS14682.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:35:44 Download gff for
BS14682.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15296-RA | 1..510 | 17..526 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:08:43 Download gff for
BS14682.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15296-RA | 3..532 | 8..536 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:48:45 Download gff for
BS14682.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15296-RA | 50..551 | 23..524 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:35:45 Download gff for
BS14682.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15296-RA | 3..532 | 8..536 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:16:09 Download gff for
BS14682.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15296-RA | 50..551 | 23..524 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:16:09 Download gff for
BS14682.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10565981..10566482 | 23..524 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:48:45 Download gff for
BS14682.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 10460014..10460515 | 23..524 | 100 | | Minus |
BS14682.pep Sequence
Translation from 16 to 525
> BS14682.pep
MFTTLMYRTAAVSMTVYITNRVGVWGKTEETDHLLDQITNGLQPVFGLLR
RTLKLDESDLSVGELSRKYYNEGVKGTFRIIRNIPNYSEELADGAKVTCL
DLVEKAKELRHKEYSKWWNTSTNKEQLIIDSPDSAAGDGSFEDLVPFEKP
KTVDNFAGEEGNGALEQRV*
BS14682.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:09:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15296-PB | 169 | CG15296-PB | 1..169 | 1..169 | 879 | 100 | Plus |
CG15296-PA | 169 | CG15296-PA | 1..169 | 1..169 | 879 | 100 | Plus |
CG7603-PA | 122 | CG7603-PA | 1..108 | 1..104 | 159 | 36.1 | Plus |