Clone Sequence Records
BS14684.3prime Sequence
405 bp (405 high quality bases) assembled on 2006-10-13
> BS14684.3prime
ATGGTCTAGAAAGCTTTTACGCCAGGTGCTGGATCAGGTTCTCGTCATCC
GACCCGGAACTGTAAGACTGAATTTCGAGACGGGGGATTCGGATGGTGGG
CCCCACTCGATAGGTGGTGCTGGAAGATGAATTACCAATCACGTGGTTCT
CTGTATCGTCATCCTGGGTGCTGCTCAAGGAGCTCATGTAGCGAGAGGTT
GAGTTCACGAACTCGAAACCGACTCCCATTCTGGCCACGTTTTTGGCCAT
ATACTGTTCGCGCCACGCCTGGTTGGATTCCTCATGGTATTCCAGAGTTG
ATTCATCGGACACATCCTCGTTGGATTGCATCTGATGCAGTATAATGGCG
GGACTGGGCACCCAAATATCGCGACGACTGGTATTCGACATGTCGACTGA
TAACT
BS14684.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:51:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13039-PA | 375 | CG13039-RA | 1..375 | 391..17 | 1875 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:00:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13039-RA | 706 | CG13039-RA | 81..456 | 392..17 | 1880 | 100 | Minus |
CG13040-RB | 1419 | CG13040-RB | 76..333 | 392..135 | 1290 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:00:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16326307..16326682 | 17..392 | 1880 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 04:00:37 has no hits.
BS14684.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:55:16 Download gff for
BS14684.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13039-PA | 1..375 | 17..391 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:33:35 Download gff for
BS14684.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13039-RA | 81..456 | 17..392 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:00:30 Download gff for
BS14684.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13039-RA | 81..456 | 17..392 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:00:30 Download gff for
BS14684.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16326307..16326682 | 17..392 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:33:35 Download gff for
BS14684.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16319407..16319782 | 17..392 | 100 | | Plus |
BS14684.5prime Sequence
405 bp (405 high quality bases) assembled on 2006-10-13
> BS14684.5prime
GAAGTTATCAGTCGACATGTCGAATACCAGTCGTCGCGATATTTGGGTGC
CCAGTCCCGCCATTATACTGCATCAGATGCAATCCAACGAGGATGTGTCC
GATGAATCAACTCTGGAATACCATGAGGAATCCAACCAGGCGTGGCGCGA
ACAGTATATGGCCAAAAACGTGGCCAGAATGGGAGTCGGTTTCGAGTTCG
TGAACTCAACCTCTCGCTACATGAGCTCCTTGAGCAGCACCCAGGATGAC
GATACAGAGAACCACGTGATTGGTAATTCATCTTCCAGCACCACCTATCG
AGTGGGGCCCACCATCCGAATCCCCCGTCTCGAAATTCAGTCTTACAGTT
CCGGGTCGGATGACGAGAACCTGATCCAGCACCTGGCGTAAAAGCTTTCT
AGACC
BS14684.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:51:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13039-PA | 375 | CG13039-RA | 1..375 | 17..391 | 1875 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 18:00:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13039-RA | 706 | CG13039-RA | 81..456 | 16..391 | 1880 | 100 | Plus |
CG13040-RB | 1419 | CG13040-RB | 76..333 | 16..273 | 1290 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:00:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16326307..16326682 | 391..16 | 1880 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-30 18:00:23 has no hits.
BS14684.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:55:17 Download gff for
BS14684.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13039-PA | 1..375 | 17..391 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:52:55 Download gff for
BS14684.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13039-RA | 81..456 | 16..391 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:07:29 Download gff for
BS14684.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13039-RA | 81..456 | 16..391 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:07:29 Download gff for
BS14684.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16326307..16326682 | 16..391 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:52:55 Download gff for
BS14684.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16319407..16319782 | 16..391 | 100 | | Minus |
BS14684.complete Sequence
407 bp assembled on 2006-11-01
GenBank Submission: FJ637760
> BS14684.complete
GAAGTTATCAGTCGACATGTCGAATACCAGTCGTCGCGATATTTGGGTGC
CCAGTCCCGCCATTATACTGCATCAGATGCAATCCAACGAGGATGTGTCC
GATGAATCAACTCTGGAATACCATGAGGAATCCAACCAGGCGTGGCGCGA
ACAGTATATGGCCAAAAACGTGGCCAGAATGGGAGTCGGTTTCGAGTTCG
TGAACTCAACCTCTCGCTACATGAGCTCCTTGAGCAGCACCCAGGATGAC
GATACAGAGAACCACGTGATTGGTAATTCATCTTCCAGCACCACCTATCG
AGTGGGGCCCACCATCCGAATCCCCCGTCTCGAAATTCAGTCTTACAGTT
CCGGGTCGGATGACGAGAACCTGATCCAGCACCTGGCGTAAAAGCTTTCT
AGACCAT
BS14684.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:08:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13039-RA | 375 | CG13039-PA | 1..375 | 17..391 | 1875 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:08:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13039-RA | 706 | CG13039-RA | 81..456 | 16..391 | 1880 | 100 | Plus |
CG13040-RB | 1419 | CG13040-RB | 76..333 | 16..273 | 1290 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:08:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16326307..16326682 | 391..16 | 1880 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:08:09 has no hits.
BS14684.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:07:25 Download gff for
BS14684.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13039-RA | 1..375 | 17..391 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:16:53 Download gff for
BS14684.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13039-RA | 81..456 | 16..391 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:49:47 Download gff for
BS14684.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13039-RA | 82..454 | 17..389 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:07:25 Download gff for
BS14684.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13039-RA | 81..456 | 16..391 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:11:36 Download gff for
BS14684.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13039-RA | 82..454 | 17..389 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:11:36 Download gff for
BS14684.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16326309..16326681 | 17..389 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:49:47 Download gff for
BS14684.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16319409..16319781 | 17..389 | 100 | | Minus |
BS14684.pep Sequence
Translation from 16 to 390
> BS14684.pep
MSNTSRRDIWVPSPAIILHQMQSNEDVSDESTLEYHEESNQAWREQYMAK
NVARMGVGFEFVNSTSRYMSSLSSTQDDDTENHVIGNSSSSTTYRVGPTI
RIPRLEIQSYSSGSDDENLIQHLA*
BS14684.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:30:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13039-PA | 124 | CG13039-PA | 1..124 | 1..124 | 638 | 100 | Plus |