Clone BS14689 Report

Search the DGRC for BS14689

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:146
Well:89
Vector:pDNR-Dual
Associated Gene/TranscriptCG14609-RA
Protein status:BS14689.pep: full length peptide match
Sequenced Size:1826

Clone Sequence Records

BS14689.complete Sequence

1826 bp assembled on 2009-12-07

GenBank Submission: KX801481

> BS14689.complete
GAAGTTATCAGTCGACATGCCGCCGTGTACTTTGCGCCAGAGAGGCATGG
CCTATATACCACGTCGGGACAAGAACCGAGAGAAGGATGTTTTGGCCCCC
AAGCCTGTGCATCCGCGCTCCTTGAGATTTCATGGATTCTTTGGCATGTC
GTACGTGCATCAGCATGTGATGGTTGATGAGCGATGGACCCCCAATTCCC
TAACCGAGCAGTTCAAGGGAATGACCGACTTGTTGACGCGTCGTTTGGTG
TTCAAGAACCATGAGTCGAAGGCGAATCGCCAGCGGTATTTTCGAGAGAA
CAAGCGCCTGAAGTTGCAATGCCGCGATGGTCGCGCAAAATTACAGAATA
TTCTGATCAATGACAATACCCATAAGATCCGCAACTTTCTCATCAACCAT
AAGCCGCTGCAGAGACTGTACCAGAAGATGCCAATTCACTTGGTCGTGGA
CAACATCAATCAGCGAACTTTTGTGATGAGAAAGGAGCGGGATCGTTTGG
AGTTTCGCTTGGATCAGTTGAAGCAGCATTACAAGGAACAGCTGCTGCGT
AGAGCACTTTTGCAGAATCGCATTAAGTACCAGAACGAATTTATTCTCGA
CGAGGAGTTGAAGTCACGAGTTTTTCTTAAGAAGATTGAAAATTCGAATG
TGCGCCTAAAGGCGATCAAGACGATCAACAACACCTACAAAAAGATGATA
CAGGTGCTCGTTCATGACGAGATCTTCTATGAACCCATCTTGCGCTCCCT
TAGCAGCGACATGGACGATCAATCAAACTTCATCAAACATATCCTCTTCC
TGGGCATGCCGGCGATTGCGAAGTTCAAGGAGTTGAACGATGAGTTCCGA
AACATGGAGGAGAAATCCCGGAAAAACCTGCAGCATAAATTGCAAATGCT
GTCCGCTCTAAAGAAACCGGCAGGTACATCGATTGCTAATTTCAATAAGC
CCAAGGAGGCGGCTCCAACGACGAATCTGAAGCGATATGTTCGGGAAACT
CAGAGCATGATGATTCTAAAACTGGAGCTAAAGGCTGTGGAAAAGACAAT
CAAGGAGGTTAAGTTTGTGACACTCTGTTCGCAGGCCAAGGAAATTTATC
CACGAATGAAGAGCCAGGTGGACAACAATGATAAACTGCATCGTATGATT
GTCAATGACATGTTGGCTCATGAAATGCTGGAAACCAAGATGAAGTGCGC
CAGTGTCTTGAAAGGGGTGCTGATCAACAATCTGTCAGAGGAAGAGATTA
ATCGCTTGGAGCGCATTAAGGACCTAAAGAAAACGCTTCAAAATGACATC
CAATTTGAACAAGATACTTTGCAACATCTTAAGAACAGAGCTGATGCATA
TGTATTGTTGAGAGTTAGCATTTGGAATCTTTTGGAGATCCTTCGTCACA
TTGATCGCCAGCCCAAATTACTACGTGCGCAGTATCCCAACTCGTACTTG
AAGCTCCCGTTGCTAAAATTCGAAATGCTGAACATGAGGGCTGCTGCCCC
AGAGATTTTCGAGGAGAATATTGATAACATAATGCATATGGTGAAGCGTA
AGATCTACAAGCTGATGAAGGCTTATGCAGTTGAGCTCAAACCGGCGACC
ATCAAGCGAAATGTCGAGGAATACCATGCCGACTTCCTGGCCAGCCTAGA
TATGTACGAGCCAGTGGATAATGAAGAGCAGGCTCCAACAGCTCCCGAGG
ATGACATCCTGCAGGAGAACAAGACCATGGCCAATGTACCCAACCGCAAA
CAAATCAAGGCCCAAAGTGCCAAGCTTGTGGAGGAGCTGGCCAAGCGGGA
TGAAATGTAAAAGCTTTCTAGACCAT

BS14689.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:57:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG14609-RB 1794 CG14609-PB 1..1794 17..1810 8955 99.9 Plus
CG14609-RA 1794 CG14609-PA 1..1794 17..1810 8955 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:57:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG14609-RB 2081 CG14609-RB 123..1919 15..1811 8970 99.9 Plus
CG14609-RA 1993 CG14609-RA 123..1919 15..1811 8970 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:57:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 7201758..7202318 544..1104 2790 99.8 Plus
3R 32079331 3R 7201375..7201682 237..544 1540 100 Plus
3R 32079331 3R 7202998..7203288 1521..1811 1455 100 Plus
3R 32079331 3R 7201092..7201313 15..236 1110 100 Plus
3R 32079331 3R 7202781..7202940 1361..1520 800 100 Plus
3R 32079331 3R 7202380..7202527 1104..1251 740 100 Plus
3R 32079331 3R 7202580..7202694 1248..1362 560 99.1 Plus
Blast to na_te.dros performed on 2014-11-28 01:57:35 has no hits.

BS14689.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:43:35 Download gff for BS14689.complete
Subject Subject Range Query Range Percent Splice Strand
CG14609-RA 125..1916 17..1808 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:02:12 Download gff for BS14689.complete
Subject Subject Range Query Range Percent Splice Strand
CG14609-RA 125..1916 17..1808 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:05:31 Download gff for BS14689.complete
Subject Subject Range Query Range Percent Splice Strand
CG14609-RA 125..1916 17..1808 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:00:39 Download gff for BS14689.complete
Subject Subject Range Query Range Percent Splice Strand
CG14609-RA 125..1916 17..1808 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:00:39 Download gff for BS14689.complete
Subject Subject Range Query Range Percent Splice Strand
3R 7202584..7202694 1252..1362 100 -> Plus
3R 7202783..7202940 1363..1520 100 -> Plus
3R 7201094..7201313 17..236 100 -> Plus
3R 7201375..7201682 237..544 100 -> Plus
3R 7201759..7202318 545..1104 99 -> Plus
3R 7202381..7202527 1105..1251 100 -> Plus
3R 7202998..7203285 1521..1808 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:02:12 Download gff for BS14689.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3028103..3028249 1105..1251 100 -> Plus
arm_3R 3028306..3028416 1252..1362 100 -> Plus
arm_3R 3026816..3027035 17..236 100 -> Plus
arm_3R 3027097..3027404 237..544 100 -> Plus
arm_3R 3028505..3028662 1363..1520 100 -> Plus
arm_3R 3027481..3028040 545..1104 99 -> Plus
arm_3R 3028720..3029007 1521..1808 100   Plus

BS14689.3prime Sequence

745 bp (737 high quality bases) assembled on 2006-10-13

> BS14689.3prime
ATGGTCTAGAAAGCTTTTACATTTCATCCCGCTTGGCCAGCTCCTCCACA
AGCTTGGCACTTTGGGCCTTGATTTGTTTGCGGTTGGGTACATTGGCCAT
GGTCTTGTTCTCCTGCAGGATGTCATCCTCGGGAGCTGTTGGAGCCTGCT
CTTCATTATCCACTGGCTCGTACATATCTAGGCTGGCCAGGAAGTCGGCA
TGGTATTCCTCGACATTTCGCTTGATGGTCGCCGGTTTGAGCTCAACTGC
ATAAGCCTTCATCAGCTTGTAGATCTTACGCTTCACCATATGCATTATGT
TATCAATATTCTCCTCGAAAATCTCTGGGGCAGCAGCCCTCATGTTCAGC
ATTTCGAATTTTAGCAACGGGAGCTTCAAGTACGAGTTGGGATACTGCGC
ACGTAGTAATTTGGGCTGGCGATCAATGTGACGAAGGATCTCCAAAAGAT
TCCAAATGCTAACTCTCAACAATACATATGCATCAGCTCTGTTCTTAAGA
TGTTGCAAAGTATCTTGTTCAAATTGGATGTCATTTTGAAGCGTTTTCTT
TAGGTCCTTAATGCGCTCCAAGCGATTAATCTCTTCCTCTGACAGATTGT
TGATCAGCACCCCTTTCAAGACACTGGCGCACTTCATCTTGGTTTCCAGC
ATTTCATGAGCCAACATGTCATTGACAATCATACGATGCAGTTTATCATT
GTTGTCCACCTGGCTCTTCATTCGTGGATAAATTTCCTTGGCCTG

BS14689.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:57:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG14609-PA 1794 CG14609-RA 1066..1794 745..17 3645 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:38:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG14609-RB 2081 CG14609-RB 1190..1919 745..16 3650 100 Minus
CG14609-RA 1993 CG14609-RA 1190..1919 745..16 3650 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:38:35
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 7202998..7203288 306..16 1455 100 Minus
3R 32079331 3R 7202781..7202940 466..307 800 100 Minus
3R 32079331 3R 7202380..7202527 723..576 740 100 Minus
3R 32079331 3R 7202580..7202694 579..465 560 99.1 Minus
Blast to na_te.dros performed on 2015-02-13 07:38:37 has no hits.

BS14689.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:55:21 Download gff for BS14689.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14609-PA 1066..1794 17..745 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 21:46:33 Download gff for BS14689.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14609-RA 1190..1924 10..745 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:58:31 Download gff for BS14689.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14609-RA 1190..1924 10..745 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:58:31 Download gff for BS14689.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 7202296..7202318 723..745 100 -> Minus
3R 7202381..7202527 576..722 100 -> Minus
3R 7202584..7202694 465..575 100 -> Minus
3R 7202783..7202940 307..464 100 -> Minus
3R 7202998..7203293 10..306 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 21:46:33 Download gff for BS14689.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3028018..3028040 723..745 100 -> Minus
arm_3R 3028103..3028249 576..722 100 -> Minus
arm_3R 3028306..3028416 465..575 100 -> Minus
arm_3R 3028505..3028662 307..464 100 -> Minus
arm_3R 3028720..3029015 10..306 99   Minus

BS14689.5prime Sequence

820 bp (745 high quality bases) assembled on 2006-10-13

> BS14689.5prime
GAAGTTATCAGTCGACATGCCGCCGTGTACTTTGCGCCAGAGAGGCATGG
CCTATATACCACGTCGGGACAAGAACCGAGAGAAGGATGTTTTGGCCCCC
AAGCCTGTGCATCCGCGCTCCTTGAGATTTCATGGATTCTTTGGCATGTC
GTACGTGCATCAGCATGTGATGGTTGATGAGCGATGGACCCCCAATTCCC
TAACCGAGCAGTTCAAGGGAATGACCGACTTGTTGACGCGTCGTTTGGTG
TTCAAGAACCATGAGTCGAAGGCGAATCGCCAGCGGTATTTTCGAGAGAA
CAAGCGCCTGAAGTTGCAATGCCGCGATGGTCGCGCAAAATTACAGAATA
TTCTGATCAATGACAATACCCATAAGATCCGCAACTTTCTCATCAACCAT
AAGCCGCTGCAGAGACTGTACCAGAAGATGCCAATTCACTTGGTCGTGGA
CAACATCAATCAGCGAACTTTTGTGATGAGAAAGGAGCGGGATCGTTTGG
AGTTTCGCTTGGATCAGTTGAAGCAGCATTACAAGGAACAGCTGCTGCGT
AGAGCACTTTTGCAGAATCGCATTAAGTACCAGAACGAATTTATTCTCGA
CGAGGAGTTGAAGTCACGAGTTTTTCTTAAGAAGATTGAAAATTCGAATG
TGCGCCTAAAGGCGATCAAGACGATCAACAACACCTACAAAAAGATGATA
CAGGTGCTCGTTCATGACGAGATCTTCTATGAACCCATCTTGCGCTCCCT
TAGCAGCGACATGGACGATCAATCAAACTTCATCAAACATATCCTCTTCC
TGGGCATGCCGGCGATTGCG

BS14689.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:57:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG14609-PA 1794 CG14609-RA 1..804 17..820 3995 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:30:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG14609-RB 2081 CG14609-RB 123..928 15..820 4015 99.9 Plus
CG14609-RA 1993 CG14609-RA 123..928 15..820 4015 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:30:37
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 7201375..7201682 237..544 1540 100 Plus
3R 32079331 3R 7201758..7202034 544..820 1370 99.6 Plus
3R 32079331 3R 7201092..7201313 15..236 1110 100 Plus
Blast to na_te.dros performed on 2015-02-10 18:30:41 has no hits.

BS14689.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:55:21 Download gff for BS14689.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14609-PA 1..804 17..820 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 06:54:17 Download gff for BS14689.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14609-RA 117..928 9..820 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:02:30 Download gff for BS14689.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14609-RA 117..928 9..820 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 20:02:30 Download gff for BS14689.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 7201086..7201313 9..236 99 -> Plus
3R 7201759..7202034 545..820 99   Plus
3R 7201375..7201682 237..544 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 06:54:17 Download gff for BS14689.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3026808..3027035 9..236 99 -> Plus
arm_3R 3027097..3027404 237..544 100 -> Plus
arm_3R 3027481..3027756 545..820 99   Plus

BS14689.pep Sequence

Translation from 16 to 1809

> BS14689.pep
MPPCTLRQRGMAYIPRRDKNREKDVLAPKPVHPRSLRFHGFFGMSYVHQH
VMVDERWTPNSLTEQFKGMTDLLTRRLVFKNHESKANRQRYFRENKRLKL
QCRDGRAKLQNILINDNTHKIRNFLINHKPLQRLYQKMPIHLVVDNINQR
TFVMRKERDRLEFRLDQLKQHYKEQLLRRALLQNRIKYQNEFILDEELKS
RVFLKKIENSNVRLKAIKTINNTYKKMIQVLVHDEIFYEPILRSLSSDMD
DQSNFIKHILFLGMPAIAKFKELNDEFRNMEEKSRKNLQHKLQMLSALKK
PAGTSIANFNKPKEAAPTTNLKRYVRETQSMMILKLELKAVEKTIKEVKF
VTLCSQAKEIYPRMKSQVDNNDKLHRMIVNDMLAHEMLETKMKCASVLKG
VLINNLSEEEINRLERIKDLKKTLQNDIQFEQDTLQHLKNRADAYVLLRV
SIWNLLEILRHIDRQPKLLRAQYPNSYLKLPLLKFEMLNMRAAAPEIFEE
NIDNIMHMVKRKIYKLMKAYAVELKPATIKRNVEEYHADFLASLDMYEPV
DNEEQAPTAPEDDILQENKTMANVPNRKQIKAQSAKLVEELAKRDEM*

BS14689.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:12:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG14609-PB 597 CG14609-PB 1..597 1..597 3059 100 Plus
CG14609-PA 597 CG14609-PA 1..597 1..597 3059 100 Plus