Clone Sequence Records
BS14704.5prime Sequence
405 bp (405 high quality bases) assembled on 2006-10-13
> BS14704.5prime
GAAGTTATCAGTCGACATGCCTACACTTCCGCTGTGCCTGCTGCTCCTGG
TGTTGGCGATTGCCTTTGGCCACGCCTACGAGGCACCTGAGGCACAGGTG
CGCGTGTTCTATCCCCGGGGATTCGAGGTCTCCATTCCGGATGCGGAGGG
TATTTCACTGTTTGCCTTCCATGGCAAGCTAAACGAGGAGTTCGACGGCC
TGGAGGCGGGACAATGGTCCAGGGATATTCCGAAAGCCAAGCGGGGACGT
TGGACATTCCGAGATCACAAGACAAAGCTCAACCATGGAGATACCCTGTA
CTTTTGGACCTACGTCATTTACAACGGGCTGGGCTATAGACAGGATGAAG
GTGCTCATGTGGTCACCAGTTACGACAATCCACATAAATAGAAGCTTTCT
AGACC
BS14704.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30148-PA | 375 | CG30148-RA | 1..375 | 17..391 | 1850 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:44:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30148-RB | 1064 | CG30148-RB | 56..430 | 17..391 | 1860 | 99.7 | Plus |
CG30148-RA | 618 | CG30148-RA | 56..430 | 17..391 | 1860 | 99.7 | Plus |
GNBP3-RA | 1531 | CG5008-RA | 111..341 | 107..337 | 315 | 76.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:44:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20547229..20547603 | 391..17 | 1860 | 99.7 | Minus |
3L | 28110227 | 3L | 8955131..8955361 | 107..337 | 315 | 75.8 | Plus |
Blast to na_te.dros performed on 2015-02-10 21:44:30 has no hits.
BS14704.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:55:29 Download gff for
BS14704.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30148-PA | 1..375 | 17..391 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:07:46 Download gff for
BS14704.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30148-RA | 44..430 | 5..391 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:45:22 Download gff for
BS14704.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30148-RA | 44..430 | 5..391 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:45:22 Download gff for
BS14704.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20547229..20547599 | 21..391 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:07:46 Download gff for
BS14704.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16434734..16435104 | 21..391 | 99 | -> | Minus |
BS14704.3prime Sequence
405 bp (405 high quality bases) assembled on 2006-10-13
> BS14704.3prime
ATGGTCTAGAAAGCTTCTATTTATGTGGATTGTCGTAACTGGTGACCACA
TGAGCACCTTCATCCTGTCTATAGCCCAGCCCGTTGTAAATGACGTAGGT
CCAAAAGTACAGGGTATCTCCATGGTTGAGCTTTGTCTTGTGATCTCGGA
ATGTCCAACGTCCCCGCTTGGCTTTCGGAATATCCCTGGACCATTGTCCC
GCCTCCAGGCCGTCGAACTCCTCGTTTAGCTTGCCATGGAAGGCAAACAG
TGAAATACCCTCCGCATCCGGAATGGAGACCTCGAATCCCCGGGGATAGA
ACACGCGCACCTGTGCCTCAGGTGCCTCGTAGGCGTGGCCAAAGGCAATC
GCCAACACCAGGAGCAGCAGGCACAGCGGAAGTGTAGGCATGTCGACTGA
TAACT
BS14704.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30148-PA | 375 | CG30148-RA | 1..375 | 391..17 | 1850 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:18:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30148-RB | 1064 | CG30148-RB | 56..430 | 391..17 | 1860 | 99.7 | Minus |
CG30148-RA | 618 | CG30148-RA | 56..430 | 391..17 | 1860 | 99.7 | Minus |
GNBP3-RA | 1531 | CG5008-RA | 111..341 | 301..71 | 315 | 76.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:18:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20547229..20547603 | 17..391 | 1860 | 99.7 | Plus |
3L | 28110227 | 3L | 8955131..8955361 | 301..71 | 315 | 75.8 | Minus |
Blast to na_te.dros performed on 2015-02-12 11:18:47 has no hits.
BS14704.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:55:29 Download gff for
BS14704.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30148-PA | 1..375 | 17..391 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:47:22 Download gff for
BS14704.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30148-RA | 44..430 | 17..403 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:35:31 Download gff for
BS14704.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30148-RA | 44..430 | 17..403 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:35:31 Download gff for
BS14704.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20547229..20547599 | 17..387 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:47:22 Download gff for
BS14704.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16434734..16435104 | 17..387 | 99 | -> | Plus |
BS14704.complete Sequence
407 bp assembled on 2006-11-01
GenBank Submission: FJ637764
> BS14704.complete
GAAGTTATCAGTCGACATGCCTACACTTCCGCTGTGCCTGCTGCTCCTGG
TGTTGGCGATTGCCTTTGGCCACGCCTACGAGGCACCTGAGGCACAGGTG
CGCGTGTTCTATCCCCGGGGATTCGAGGTCTCCATTCCGGATGCGGAGGG
TATTTCACTGTTTGCCTTCCATGGCAAGCTAAACGAGGAGTTCGACGGCC
TGGAGGCGGGACAATGGTCCAGGGATATTCCGAAAGCCAAGCGGGGACGT
TGGACATTCCGAGATCACAAGACAAAGCTCAACCATGGAGATACCCTGTA
CTTTTGGACCTACGTCATTTACAACGGGCTGGGCTATAGACAGGATGAAG
GTGCTCATGTGGTCACCAGTTACGACAATCCACATAAATAGAAGCTTTCT
AGACCAT
BS14704.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:59:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30148-RB | 375 | CG30148-PB | 1..375 | 17..391 | 1860 | 99.7 | Plus |
CG30148-RA | 375 | CG30148-PA | 1..375 | 17..391 | 1860 | 99.7 | Plus |
GNBP3-RA | 1473 | CG5008-PA | 106..336 | 107..337 | 315 | 75.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:59:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30148-RB | 1064 | CG30148-RB | 56..430 | 17..391 | 1860 | 99.7 | Plus |
CG30148-RA | 618 | CG30148-RA | 56..430 | 17..391 | 1860 | 99.7 | Plus |
GNBP3-RA | 1531 | CG5008-RA | 111..341 | 107..337 | 315 | 75.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:59:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20547229..20547603 | 391..17 | 1860 | 99.7 | Minus |
3L | 28110227 | 3L | 8955131..8955361 | 107..337 | 315 | 75.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:59:20 has no hits.
BS14704.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:35:34 Download gff for
BS14704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30148-RA | 1..375 | 17..391 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:54:21 Download gff for
BS14704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30148-RA | 67..453 | 5..391 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:04:00 Download gff for
BS14704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30148-RA | 56..424 | 17..385 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:35:34 Download gff for
BS14704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30148-RA | 67..453 | 5..391 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:30:31 Download gff for
BS14704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30148-RA | 56..424 | 17..385 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:30:31 Download gff for
BS14704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20547235..20547603 | 17..385 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:04:00 Download gff for
BS14704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16434740..16435108 | 17..385 | 99 | | Minus |
BS14704.pep Sequence
Translation from 16 to 390
> BS14704.pep
MPTLPLCLLLLVLAIAFGHAYEAPEAQVRVFYPRGFEVSIPDAEGISLFA
FHGKLNEEFDGLEAGQWSRDIPKAKRGRWTFRDHKTKLNHGDTLYFWTYV
IYNGLGYRQDEGAHVVTSYDNPHK*
BS14704.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:09:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30148-PB | 124 | CG30148-PB | 1..124 | 1..124 | 679 | 100 | Plus |
CG30148-PA | 124 | CG30148-PA | 1..124 | 1..124 | 679 | 100 | Plus |
GNBP3-PA | 490 | CG5008-PA | 13..132 | 7..123 | 425 | 66.1 | Plus |
GNBP-like3-PA | 152 | CG13422-PA | 7..124 | 4..121 | 284 | 44.1 | Plus |
CG12780-PA | 100 | CG12780-PA | 4..93 | 21..109 | 214 | 50 | Plus |