Clone Sequence Records
BS14714.3prime Sequence
761 bp (759 high quality bases) assembled on 2006-10-13
> BS14714.3prime
ATGGTCTAGAAAGCTTTCAGTTTTGCAGAAGTCTGTCGAGCGAGGATGCG
AGTTCTTTGGATATGGCGTCTGGAAACTGGATGGAGAACCTGACGACGAT
GGAGCCGCGACGGGAATTATTAATGGAATCGGGCAATCCGTAGCCCAGAA
TGCGGCGCACGGATTTCGGACTGATTACCTCGCCCACGTCGGTCTTGAGT
TCCATCGGCCTGCCAAGAAGCGTCGGCACCATCACGTGTAAACCGCACAG
AGCATCCTTCAGCGAGATTTCGGCTGTGTACAGCAGATTGTTGCCATCGC
GGCGAAAGATTGGGTGTGGCTTGTCCCGGATTATAAACACGACGTTGGCG
GGCTCAAGGTTGGGCAGTTGAATACCCTCATTGGGAAAGCAGATCTTGGT
GCCAGCCTTACAGCCCGGAGGTATCTTGACAGTGAGAATTCTGTCATATT
GTACCCCATCAACGCCGTTCCTACCCGAAGCCCGGGAGATCTTCATGCGC
CTGTTGCACCCGTTGGCAATGTCCTCCAGAGCAACGTATATTACATGTTC
GATGCTTGACTGGGGTGACTGTTGTTCGCAACGACGTTTAGGCGCGCCCG
CTCCTCCACCCAACAGGACGTCATCGTCGCTGTCAAAATCGTTTTCGATA
TCCTCGAAGAACGTAGAATATGATTCGCTGTTGTCGAAGAAACGTCCAAA
GTTGGCCCGCGGGTTGTTCTGGCGACCACCGCCACTGCCACCGCCACTGC
CACTGCCACTG
BS14714.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2887-PA | 1029 | CG2887-RA | 285..1029 | 761..17 | 3725 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:18:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2887-RA | 1234 | CG2887-RA | 355..1099 | 761..17 | 3725 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:18:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 10477395..10478139 | 17..761 | 3725 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-31 10:18:30 has no hits.
BS14714.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:55:36 Download gff for
BS14714.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2887-PA | 285..1029 | 17..761 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:36:32 Download gff for
BS14714.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2887-RA | 355..1099 | 17..761 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:45:38 Download gff for
BS14714.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2887-RA | 355..1099 | 17..761 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:45:38 Download gff for
BS14714.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10477395..10478139 | 17..761 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:36:32 Download gff for
BS14714.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 10371428..10372172 | 17..761 | 100 | | Plus |
BS14714.5prime Sequence
856 bp (783 high quality bases) assembled on 2006-10-13
> BS14714.5prime
GAAGTTATCAGTCGACATGCCTAAAGACTACTACAAGATACTGGGCATCC
AGCGCACTGCCAATGATGGCGAAATCCGCAAGGCATATCATAAGCAAGCG
CTGCGCTACCATCCGGACAAAAACAAGAGCCCTCAGGCGGAGGAGATCTT
TAAGCAGGTGGCCAAGGCATATGAAGTCCTATCAGACAAAAAGAAGCGCG
GATCGTACGACTCCCGCAATGACAAGGGTACCCGACGCAATACCGCGAAT
CAAGGTAGCGGTTTCGGCGATGGAACGGCATTTGGTAGCTGTGGTGGTGG
CAGTGGCAGTGGCAGTGGCGGTGGCAGTGGCGGTGGTCGCCAGAACAACC
CGCGGGCCAACTTTGGACGTTTCTTCGACAACAGCGAATCATATTCTACG
TTCTTCGAGGATATCGAAAACGATTTTGACAGCGACGATGACGTCCTGTT
GGGTGGAGGAGCGGGCGCGCCTAAACGTCGTTGCGAACAACAGTCACCCC
AGTCAAGCATCGAACATGTAATATACGTTGCTCTGGAGGACATTGCCAAC
GGGTGCAACAGGCGCATGAAGATCTCCCGGGCTTCGGGTAGGAACGGCGT
TGATGGGGTACAATATGACAGAATTCTCACTGTCAAGATACCTCCGGGCT
GTAAGGCTGGCACCAAGATCTGCTTTCCCAATGAGGGTATTCAACTGCCC
AACCTTGAGCCCGCCAACGTCGTGTTTATAATCCGGGACAAGCCACACCC
AATCTTTCGCCGCGATGGCAACAATCTGCTGTACACAGCCGAAATCTCGC
TGAAGGATGCTCTGTGCGGTTTACACGTGATGGTGCCGACGCTTCTTGGC
AGGCCC
BS14714.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2887-PA | 1029 | CG2887-RA | 1..839 | 17..855 | 4195 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:18:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2887-RA | 1234 | CG2887-RA | 70..909 | 16..855 | 4200 | 100 | Plus |
DnaJ-1-RA | 1916 | CG10578-RA | 358..535 | 23..200 | 245 | 75.8 | Plus |
DnaJ-1-RB | 2161 | CG10578-RB | 603..780 | 23..200 | 245 | 75.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:18:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 10477585..10478424 | 855..16 | 4200 | 100 | Minus |
3L | 28110227 | 3L | 5751410..5751587 | 200..23 | 245 | 75.8 | Minus |
Blast to na_te.dros performed on 2015-02-10 21:18:23 has no hits.
BS14714.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:55:36 Download gff for
BS14714.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2887-PA | 1..839 | 17..856 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 06:27:47 Download gff for
BS14714.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2887-RA | 70..909 | 16..856 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:33:07 Download gff for
BS14714.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2887-RA | 70..909 | 16..856 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:33:07 Download gff for
BS14714.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10477584..10478424 | 16..856 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 06:27:47 Download gff for
BS14714.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 10371617..10372457 | 16..856 | 99 | | Minus |
BS14714.complete Sequence
1061 bp assembled on 2006-11-01
GenBank Submission: FJ637770
> BS14714.complete
GAAGTTATCAGTCGACATGCCTAAAGACTACTACAAGATACTGGGCATCC
AGCGCACTGCCAATGATGGCGAAATCCGCAAGGCATATCATAAGCAAGCG
CTGCGCTACCATCCGGACAAAAACAAGAGCCCTCAGGCGGAGGAGATCTT
TAAGCAGGTGGCCAAGGCATATGAAGTCCTATCAGACAAAAAGAAGCGCG
GATCGTACGACTCCCGCAATGACAAGGGTACCCGACGCAATACCGCGAAT
CAAGGTAGCGGTTTCGGCGATGGAACGGCATTTGGTAGCTGTGGTGGTGG
CAGTGGCAGTGGCAGTGGCGGTGGCAGTGGCGGTGGTCGCCAGAACAACC
CGCGGGCCAACTTTGGACGTTTCTTCGACAACAGCGAATCATATTCTACG
TTCTTCGAGGATATCGAAAACGATTTTGACAGCGACGATGACGTCCTGTT
GGGTGGAGGAGCGGGCGCGCCTAAACGTCGTTGCGAACAACAGTCACCCC
AGTCAAGCATCGAACATGTAATATACGTTGCTCTGGAGGACATTGCCAAC
GGGTGCAACAGGCGCATGAAGATCTCCCGGGCTTCGGGTAGGAACGGCGT
TGATGGGGTACAATATGACAGAATTCTCACTGTCAAGATACCTCCGGGCT
GTAAGGCTGGCACCAAGATCTGCTTTCCCAATGAGGGTATTCAACTGCCC
AACCTTGAGCCCGCCAACGTCGTGTTTATAATCCGGGACAAGCCACACCC
AATCTTTCGCCGCGATGGCAACAATCTGCTGTACACAGCCGAAATCTCGC
TGAAGGATGCTCTGTGCGGTTTACACGTGATGGTGCCGACGCTTCTTGGC
AGGCCGATGGAACTCAAGACCGACGTGGGCGAGGTAATCAGTCCGAAATC
CGTGCGCCGCATTCTGGGCTACGGATTGCCCGATTCCATTAATAATTCCC
GTCGCGGCTCCATCGTCGTCAGGTTCTCCATCCAGTTTCCAGACGCCATA
TCCAAAGAACTCGCATCCTCGCTCGACAGACTTCTGCAAAACTGAAAGCT
TTCTAGACCAT
BS14714.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:32:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2887-RA | 1029 | CG2887-PA | 1..1029 | 17..1045 | 5145 | 100 | Plus |
DnaJ-1-RA | 1005 | CG10578-PA | 7..184 | 23..200 | 245 | 75.8 | Plus |
DnaJ-1-RB | 1005 | CG10578-PB | 7..184 | 23..200 | 245 | 75.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:32:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2887-RA | 1234 | CG2887-RA | 70..1099 | 16..1045 | 5150 | 100 | Plus |
DnaJ-1-RA | 1916 | CG10578-RA | 358..535 | 23..200 | 245 | 75.8 | Plus |
DnaJ-1-RB | 2161 | CG10578-RB | 603..780 | 23..200 | 245 | 75.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:32:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 10477395..10478424 | 1045..16 | 5150 | 100 | Minus |
3L | 28110227 | 3L | 5751410..5751587 | 200..23 | 245 | 75.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:32:49 has no hits.
BS14714.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:35:25 Download gff for
BS14714.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2887-RA | 1..1029 | 17..1045 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:08:18 Download gff for
BS14714.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2887-RA | 70..1099 | 16..1045 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:11:21 Download gff for
BS14714.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2887-RA | 71..1098 | 17..1044 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:35:25 Download gff for
BS14714.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2887-RA | 70..1099 | 16..1045 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:23:30 Download gff for
BS14714.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2887-RA | 71..1098 | 17..1044 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:23:30 Download gff for
BS14714.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10477396..10478423 | 17..1044 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:11:21 Download gff for
BS14714.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 10371429..10372456 | 17..1044 | 100 | | Minus |
BS14714.pep Sequence
Translation from 16 to 1044
> BS14714.pep
MPKDYYKILGIQRTANDGEIRKAYHKQALRYHPDKNKSPQAEEIFKQVAK
AYEVLSDKKKRGSYDSRNDKGTRRNTANQGSGFGDGTAFGSCGGGSGSGS
GGGSGGGRQNNPRANFGRFFDNSESYSTFFEDIENDFDSDDDVLLGGGAG
APKRRCEQQSPQSSIEHVIYVALEDIANGCNRRMKISRASGRNGVDGVQY
DRILTVKIPPGCKAGTKICFPNEGIQLPNLEPANVVFIIRDKPHPIFRRD
GNNLLYTAEISLKDALCGLHVMVPTLLGRPMELKTDVGEVISPKSVRRIL
GYGLPDSINNSRRGSIVVRFSIQFPDAISKELASSLDRLLQN*
BS14714.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:09:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2887-PA | 342 | CG2887-PA | 1..342 | 1..342 | 1793 | 100 | Plus |
DnaJ-1-PA | 334 | CG10578-PA | 1..334 | 1..342 | 725 | 44.9 | Plus |
DnaJ-1-PB | 334 | CG10578-PB | 1..334 | 1..342 | 725 | 44.9 | Plus |
CG5001-PC | 346 | CG5001-PC | 1..335 | 1..329 | 659 | 41.7 | Plus |
CG5001-PD | 350 | CG5001-PD | 1..339 | 1..329 | 655 | 41.2 | Plus |