Clone BS14722 Report

Search the DGRC for BS14722

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:147
Well:22
Vector:pDNR-Dual
Associated Gene/TranscriptCG11037-RA
Protein status:BS14722.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14722.5prime Sequence

717 bp (657 high quality bases) assembled on 2006-10-13

> BS14722.5prime
GAAGTTATCAGTCGACATGGAATGGCATCTCGTTTGCTGCGTGCTGGCTT
GCACTTTAGTTTCGACCCAAGTATATGGCCAAGAACAGGAGAAAATTGTG
CTTTCCCTGCCGGATGAAAGTGGTCAACCGGGCAAAAATCTCACTCTCGA
TGTGGCACAGCTGGCCAAGATAGTTCTTCCATCACCACATGAAACTCGCG
TAATTGGCGGCCATGTGACCACAAATGCCAAGTTGGGAGGATACCTAACA
GCCTTGCTTTATGAAGACGATTTTGTTTGTGGCGGTACATTGCTCAACGA
AAACATCGTCCTGACGGCGGCTCACTGTTTTCTGGGTCGAATGAAGGCGA
GCGAATGGATTGTGGCTGCCGGCATTTCGAATCTCAATCAAAAGGGTATT
CGACGCCATGTTAAGGACTTCATCCTGTCCGAGCAATTTCGAGAGGACGA
CATGAATATGGATGTAGCAGTGGTACTGCTGAAAACTCCATTGAAGGCTA
AAAACATCGGAACACTGAGCTTATGTTCGGTGAGCCTTAAGCCAGGCGTA
GAACTGGTGGTTTCCGGATGGGGCATGACCGCTCCCCGAGGACGTGGGCC
CCACAACTTACTACGTAACGGAGACAGTGCCAATTATTCACAAAAAGAAC
TTGTCGCGCTGGCTATCAGCCCACGGCTAAAATAACCGACAGTATGATAT
GGTGCTGCAGTGCTGGG

BS14722.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG11037-PA 879 CG11037-RA 1..601 17..617 3005 100 Plus
CG11037-PA 879 CG11037-RA 634..683 652..701 225 98 Plus
CG11037-PA 879 CG11037-RA 606..634 623..651 145 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:02:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG11037-RA 913 CG11037-RA 3..700 17..717 3400 99.3 Plus
CG10588-RB 3727 CG10588-RB 3678..3718 717..676 185 97.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:02:25
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20960723..20961384 680..17 3175 99.2 Minus
Blast to na_te.dros performed on 2015-02-10 18:02:27 has no hits.

BS14722.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:55:42 Download gff for BS14722.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11037-PA 1..698 17..717 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:44:17 Download gff for BS14722.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11037-RA 1..700 16..717 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:18:24 Download gff for BS14722.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11037-RA 1..700 16..717 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:18:24 Download gff for BS14722.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 20960611..20960650 677..717 97 <- Minus
3L 20960727..20961384 17..676 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:44:17 Download gff for BS14722.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20953711..20953750 677..717 97 <- Minus
arm_3L 20953827..20954484 17..676 99   Minus

BS14722.3prime Sequence

723 bp (577 high quality bases) assembled on 2006-10-13

> BS14722.3prime
ATGGTCTAGAAAGCTTTTATCGTTTTGCTAGCAAAGCTTTAATGCTTTTC
TCGATAAAAGGCTTCACGTACATAACATCCGTGTAGACGCCAGGATAACG
GTTGCTAGCACATCCAATGCCAAAGGACACTATGCCACACACCTGCTTTT
TGAACACCAACGGCCCACCTGAGTCAAAGGTGCACGCATCCTTACGTCCC
AGCACTGCAGCACATATCATACTGTCGGTTATTTTAGCCGTGGGCTGATA
GGCAGCGCGACAGTTCTTTTTGTGAATAATTGGCACTGTCACCGTACGTA
GTAAGTTGTGGGGCCCACGTCCTCGGGGAGCGGTCATGCCCCATCCGGAA
ACCACCAGTTCTACGCCTGGCTTAAGGCTCACCGAACATAAGCTCAGTGT
TCCGATGTTTTTAGCCTTCAATGGAGTTTTCAGCAGTACCACTGCTACAT
CCATATTCATGTCGTCCTCTCGAAATTGCTCGGACAGGATGAAGTCCTTA
ACATGGCGTCGAATACCCTTTTGATTGAGATTCGAAATGCCGGCAGCCAC
AATCCATTCGCTCGCCTTCATTCGACCCAGAAAACAGTGAGCCGCCGTCA
GGACGATGTTTTCATTGAGCAATGTACCGCCACAAACAAAATCGTCTTCA
TAAAGCAAGGCTGTTAGGTATCCTCCCAACTTGGCATTTGTGGTCACATG
GCCGCCAATTACGCGAGTTTCAT

BS14722.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG11037-PA 879 CG11037-RA 173..879 723..17 3510 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:18:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG11037-RA 913 CG11037-RA 175..882 723..16 3525 99.9 Minus
CG10588-RB 3727 CG10588-RB 3496..3718 16..238 1115 100 Plus
CG10587-RA 866 CG10587-RA 560..839 298..19 500 79 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:18:53
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20960723..20961212 234..723 2420 99.6 Plus
3L 28110227 3L 20960429..20960651 16..238 1115 100 Plus
3L 28110227 3L 20961564..20961776 19..231 420 79.8 Plus
3L 28110227 3L 20955805..20955968 30..193 340 80.5 Plus
Blast to na_te.dros performed on 2015-01-31 10:18:56 has no hits.

BS14722.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:55:41 Download gff for BS14722.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11037-PA 173..879 17..723 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:36:38 Download gff for BS14722.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11037-RA 175..895 7..723 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:45:44 Download gff for BS14722.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11037-RA 175..895 7..723 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:45:44 Download gff for BS14722.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 20960416..20960650 7..237 98 <- Plus
3L 20960727..20961212 238..723 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:36:38 Download gff for BS14722.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20953516..20953750 7..237 98 <- Plus
arm_3L 20953827..20954312 238..723 99   Plus

BS14722.complete Sequence

911 bp assembled on 2006-11-01

GenBank Submission: FJ637772

> BS14722.complete
GAAGTTATCAGTCGACATGGAATGGCATCTCGTTTGCTGCGTGCTGGCTT
GCACTTTAGTTTCGACCCAAGTATATGGCCAAGAACAGGAGAAAATTGTG
CTTTCCCTGCCGGATGAAAGTGGTCAACCGGGCAAAAATCTCACTCTCGA
TGTGGCACAGCTGGCCAAGATAGTTCTTCCATCACCACATGAAACTCGCG
TAATTGGCGGCCATGTGACCACAAATGCCAAGTTGGGAGGATACCTAACA
GCCTTGCTTTATGAAGACGATTTTGTTTGTGGCGGTACATTGCTCAACGA
AAACATCGTCCTGACGGCGGCTCACTGTTTTCTGGGTCGAATGAAGGCGA
GCGAATGGATTGTGGCTGCCGGCATTTCGAATCTCAATCAAAAGGGTATT
CGACGCCATGTTAAGGACTTCATCCTGTCCGAGCAATTTCGAGAGGACGA
CATGAATATGGATGTAGCAGTGGTACTGCTGAAAACTCCATTGAAGGCTA
AAAACATCGGAACACTGAGCTTATGTTCGGTGAGCCTTAAGCCAGGCGTA
GAACTGGTGGTTTCCGGATGGGGCATGACCGCTCCCCGAGGACGTGGGCC
CCACAACTTACTACGTACGGTGACAGTGCCAATTATTCACAAAAAGAACT
GTCGCGCTGCCTATCAGCCCACGGCTAAAATAACCGACAGTATGATATGT
GCTGCAGTGCTGGGACGTAAGGATGCGTGCACCTTTGACTCAGGTGGGCC
GTTGGTGTTCAAAAAGCAGGTGTGTGGCATAGTGTCCTTTGGCATTGGAT
GTGCTAGCAACCGTTATCCTGGCGTCTACACGGATGTTATGTACGTGAAG
CCTTTTATCGAGAAAAGCATTAAAGCTTTGCTAGCAAAACGATAAAAGCT
TTCTAGACCAT

BS14722.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:52:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG11037-RA 879 CG11037-PA 1..879 17..895 4395 100 Plus
CG10587-RA 831 CG10587-PA 550..829 614..893 500 78.6 Plus
CG10587-RC 870 CG10587-PC 656..868 681..893 420 79.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:52:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG11037-RA 913 CG11037-RA 3..882 17..896 4400 100 Plus
CG10588-RB 3727 CG10588-RB 3496..3718 896..674 1115 100 Minus
CG10587-RA 866 CG10587-RA 560..839 614..893 500 78.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:52:48
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20960723..20961384 678..17 3295 99.8 Minus
3L 28110227 3L 20960429..20960651 896..674 1115 100 Minus
3L 28110227 3L 20961564..20961776 893..681 420 79.8 Minus
3L 28110227 3L 20955805..20955968 882..719 340 80.5 Minus
Blast to na_te.dros performed on 2014-11-27 06:52:49 has no hits.

BS14722.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:34:53 Download gff for BS14722.complete
Subject Subject Range Query Range Percent Splice Strand
CG11037-RA 1..879 17..895 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:07:42 Download gff for BS14722.complete
Subject Subject Range Query Range Percent Splice Strand
CG11037-RA 1..895 16..905 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:57:33 Download gff for BS14722.complete
Subject Subject Range Query Range Percent Splice Strand
CG11037-RA 3..879 17..893 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:34:53 Download gff for BS14722.complete
Subject Subject Range Query Range Percent Splice Strand
CG11037-RA 1..895 16..905 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:57:00 Download gff for BS14722.complete
Subject Subject Range Query Range Percent Splice Strand
CG11037-RA 3..879 17..893 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:57:00 Download gff for BS14722.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20960432..20960650 675..893 100 <- Minus
3L 20960727..20961384 17..674 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:57:33 Download gff for BS14722.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20953532..20953750 675..893 100 <- Minus
arm_3L 20953827..20954484 17..674 100   Minus

BS14722.pep Sequence

Translation from 16 to 894

> BS14722.pep
MEWHLVCCVLACTLVSTQVYGQEQEKIVLSLPDESGQPGKNLTLDVAQLA
KIVLPSPHETRVIGGHVTTNAKLGGYLTALLYEDDFVCGGTLLNENIVLT
AAHCFLGRMKASEWIVAAGISNLNQKGIRRHVKDFILSEQFREDDMNMDV
AVVLLKTPLKAKNIGTLSLCSVSLKPGVELVVSGWGMTAPRGRGPHNLLR
TVTVPIIHKKNCRAAYQPTAKITDSMICAAVLGRKDACTFDSGGPLVFKK
QVCGIVSFGIGCASNRYPGVYTDVMYVKPFIEKSIKALLAKR*

BS14722.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:12:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG11037-PA 292 CG11037-PA 1..292 1..292 1523 100 Plus
CG10587-PA 276 CG10587-PA 1..276 1..292 908 61.3 Plus
CG10587-PC 289 CG10587-PC 1..289 1..292 884 58.7 Plus
Sems-PA 275 CG10586-PA 23..273 41..291 871 66.5 Plus
CG10587-PD 225 CG10587-PD 1..205 1..221 585 53.8 Plus