Clone BS14731 Report

Search the DGRC for BS14731

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:147
Well:31
Vector:pDNR-Dual
Associated Gene/TranscriptCG14017-RB
Protein status:BS14731.pep: validated full length
Sequenced Size:16

Clone Sequence Records

BS14731.3prime Sequence

372 bp (372 high quality bases) assembled on 2006-10-13

> BS14731.3prime
ATGGTCTAGAAAGCTTCTATGAGTAAATGCATGAAATCGTTTTAGTTGCA
TTCAGCTTTTCGCGCTCTAGAAGTGCCATAGTCAGTGGATCATTGGGGAC
ATTATTCTCGCTGAAATAGAAGCACGTTCCCAGTGGAGAGAAGTGCACCT
CGTTGAACTGGGTGGGTGTCATCACGATTGTTCCCACTGCTGCCCTCAGG
GGGACTAGTTGATGTATCACATTATCGTTGGGTAGATACCGTCTGTCCTC
CAGCTTGACAAACGAATTCAAATAGTGATTGTAGGCGATGTCTTGTTTTC
GATTTTCCAAAGCTCGAAATCCTTTGGAACCGGCGTGTTTCCTTTGTGAG
TCCTCCATGTCGACTGATAACT

BS14731.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG14017-PB 342 CG14017-RB 1..342 358..17 1710 100 Minus
CG14017-PA 717 CG14017-RA 1..327 358..32 1635 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:19:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG14017-RA 1179 CG14017-RA 78..408 362..32 1655 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:19:22
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5553974..5554304 362..32 1655 100 Minus
Blast to na_te.dros performed on 2015-02-10 21:19:25 has no hits.

BS14731.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:55:49 Download gff for BS14731.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14017-PB 1..342 17..358 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 06:27:57 Download gff for BS14731.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14017-RA 70..413 27..370 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:34:39 Download gff for BS14731.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14017-RA 70..413 27..370 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:34:39 Download gff for BS14731.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 5553966..5554304 32..370 98 -> Minus
2L 5554352..5554367 16..31 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 06:27:57 Download gff for BS14731.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5553966..5554304 32..370 98 -> Minus
arm_2L 5554352..5554367 16..31 100   Minus

BS14731.5prime Sequence

372 bp (372 high quality bases) assembled on 2006-10-13

> BS14731.5prime
GAAGTTATCAGTCGACATGGAGGACTCACAAAGGAAACACGCCGGTTCCA
AAGGATTTCGAGCTTTGGAAAATCGAAAACAAGACATCGCCTACAATCAC
TATTTGAATTCGTTTGTCAAGCTGGAGGACAGACGGTATCTACCCAACGA
TAATGTGATACATCAACTAGTCCCCCTGAGGGCAGCAGTGGGAACAATCG
TGATGACACCCACCCAGTTCAACGAGGTGCACTTCTCTCCACTGGGAACG
TGCTTCTATTTCAGCGAGAATAATGTCCCCAATGATCCACTGACTATGGC
ACTTCTAGAGCGCGAAAAGCTGAATGCAACTAAAACGATTTCATGCATTT
ACTCATAGAAGCTTTCTAGACC

BS14731.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG14017-PB 342 CG14017-RB 1..342 17..358 1710 100 Plus
CG14017-PA 717 CG14017-RA 1..327 17..343 1635 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:04:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG14017-RA 1179 CG14017-RA 78..408 13..343 1655 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:03:59
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5553974..5554304 13..343 1655 100 Plus
Blast to na_te.dros performed on 2015-02-10 18:04:02 has no hits.

BS14731.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:55:49 Download gff for BS14731.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14017-PB 1..342 17..358 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:44:27 Download gff for BS14731.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14017-RA 70..413 5..348 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:15:06 Download gff for BS14731.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14017-RA 70..413 5..348 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:15:06 Download gff for BS14731.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 5553966..5554304 5..343 98 -> Plus
2L 5554352..5554367 344..359 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:44:27 Download gff for BS14731.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5553966..5554304 5..343 98 -> Plus
arm_2L 5554352..5554367 344..359 100   Plus

BS14731.complete Sequence

374 bp assembled on 2006-11-01

GenBank Submission: FJ637774

> BS14731.complete
GAAGTTATCAGTCGACATGGAGGACTCACAAAGGAAACACGCCGGTTCCA
AAGGATTTCGAGCTTTGGAAAATCGAAAACAAGACATCGCCTACAATCAC
TATTTGAATTCGTTTGTCAAGCTGGAGGACAGACGGTATCTACCCAACGA
TAATGTGATACATCAACTAGTCCCCCTGAGGGCAGCAGTGGGAACAATCG
TGATGACACCCACCCAGTTCAACGAGGTGCACTTCTCTCCACTGGGAACG
TGCTTCTATTTCAGCGAGAATAATGTCCCCAATGATCCACTGACTATGGC
ACTTCTAGAGCGCGAAAAGCTGAATGCAACTAAAACGATTTCATGCATTT
ACTCATAGAAGCTTTCTAGACCAT

BS14731.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:45:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG14017-RA 717 CG14017-PA 1..327 17..343 1635 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:45:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG14017-RA 1179 CG14017-RA 78..408 13..343 1655 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:45:46
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5553974..5554304 13..343 1655 100 Plus
Blast to na_te.dros performed on 2014-11-27 23:45:47 has no hits.

BS14731.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:46:47 Download gff for BS14731.complete
Subject Subject Range Query Range Percent Splice Strand
CG14017-RB 1..342 17..358 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:34:35 Download gff for BS14731.complete
Subject Subject Range Query Range Percent Splice Strand
CG14017-RB 70..424 5..359 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:37:16 Download gff for BS14731.complete
Subject Subject Range Query Range Percent Splice Strand
CG14017-RA 82..413 17..348 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:46:47 Download gff for BS14731.complete
Subject Subject Range Query Range Percent Splice Strand
CG14017-RB 70..424 5..359 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:07:39 Download gff for BS14731.complete
Subject Subject Range Query Range Percent Splice Strand
CG14017-RA 82..413 17..348 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:07:39 Download gff for BS14731.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5553978..5554304 17..343 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:37:16 Download gff for BS14731.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5553978..5554304 17..343 100 -> Plus

BS14731.pep Sequence

Translation from 16 to 357

> BS14731.pep
MEDSQRKHAGSKGFRALENRKQDIAYNHYLNSFVKLEDRRYLPNDNVIHQ
LVPLRAAVGTIVMTPTQFNEVHFSPLGTCFYFSENNVPNDPLTMALLERE
KLNATKTISCIYS*

BS14731.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:26:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG14017-PA 238 CG14017-PA 1..111 1..111 574 99.1 Plus