Clone Sequence Records
BS14731.3prime Sequence
372 bp (372 high quality bases) assembled on 2006-10-13
> BS14731.3prime
ATGGTCTAGAAAGCTTCTATGAGTAAATGCATGAAATCGTTTTAGTTGCA
TTCAGCTTTTCGCGCTCTAGAAGTGCCATAGTCAGTGGATCATTGGGGAC
ATTATTCTCGCTGAAATAGAAGCACGTTCCCAGTGGAGAGAAGTGCACCT
CGTTGAACTGGGTGGGTGTCATCACGATTGTTCCCACTGCTGCCCTCAGG
GGGACTAGTTGATGTATCACATTATCGTTGGGTAGATACCGTCTGTCCTC
CAGCTTGACAAACGAATTCAAATAGTGATTGTAGGCGATGTCTTGTTTTC
GATTTTCCAAAGCTCGAAATCCTTTGGAACCGGCGTGTTTCCTTTGTGAG
TCCTCCATGTCGACTGATAACT
BS14731.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14017-PB | 342 | CG14017-RB | 1..342 | 358..17 | 1710 | 100 | Minus |
CG14017-PA | 717 | CG14017-RA | 1..327 | 358..32 | 1635 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:19:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14017-RA | 1179 | CG14017-RA | 78..408 | 362..32 | 1655 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:19:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5553974..5554304 | 362..32 | 1655 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 21:19:25 has no hits.
BS14731.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:55:49 Download gff for
BS14731.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-PB | 1..342 | 17..358 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 06:27:57 Download gff for
BS14731.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RA | 70..413 | 27..370 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:34:39 Download gff for
BS14731.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RA | 70..413 | 27..370 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:34:39 Download gff for
BS14731.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5553966..5554304 | 32..370 | 98 | -> | Minus |
2L | 5554352..5554367 | 16..31 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 06:27:57 Download gff for
BS14731.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5553966..5554304 | 32..370 | 98 | -> | Minus |
arm_2L | 5554352..5554367 | 16..31 | 100 | | Minus |
BS14731.5prime Sequence
372 bp (372 high quality bases) assembled on 2006-10-13
> BS14731.5prime
GAAGTTATCAGTCGACATGGAGGACTCACAAAGGAAACACGCCGGTTCCA
AAGGATTTCGAGCTTTGGAAAATCGAAAACAAGACATCGCCTACAATCAC
TATTTGAATTCGTTTGTCAAGCTGGAGGACAGACGGTATCTACCCAACGA
TAATGTGATACATCAACTAGTCCCCCTGAGGGCAGCAGTGGGAACAATCG
TGATGACACCCACCCAGTTCAACGAGGTGCACTTCTCTCCACTGGGAACG
TGCTTCTATTTCAGCGAGAATAATGTCCCCAATGATCCACTGACTATGGC
ACTTCTAGAGCGCGAAAAGCTGAATGCAACTAAAACGATTTCATGCATTT
ACTCATAGAAGCTTTCTAGACC
BS14731.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14017-PB | 342 | CG14017-RB | 1..342 | 17..358 | 1710 | 100 | Plus |
CG14017-PA | 717 | CG14017-RA | 1..327 | 17..343 | 1635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:04:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14017-RA | 1179 | CG14017-RA | 78..408 | 13..343 | 1655 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:03:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5553974..5554304 | 13..343 | 1655 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:04:02 has no hits.
BS14731.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:55:49 Download gff for
BS14731.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-PB | 1..342 | 17..358 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:44:27 Download gff for
BS14731.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RA | 70..413 | 5..348 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:15:06 Download gff for
BS14731.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RA | 70..413 | 5..348 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:15:06 Download gff for
BS14731.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5553966..5554304 | 5..343 | 98 | -> | Plus |
2L | 5554352..5554367 | 344..359 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:44:27 Download gff for
BS14731.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5553966..5554304 | 5..343 | 98 | -> | Plus |
arm_2L | 5554352..5554367 | 344..359 | 100 | | Plus |
BS14731.complete Sequence
374 bp assembled on 2006-11-01
GenBank Submission: FJ637774
> BS14731.complete
GAAGTTATCAGTCGACATGGAGGACTCACAAAGGAAACACGCCGGTTCCA
AAGGATTTCGAGCTTTGGAAAATCGAAAACAAGACATCGCCTACAATCAC
TATTTGAATTCGTTTGTCAAGCTGGAGGACAGACGGTATCTACCCAACGA
TAATGTGATACATCAACTAGTCCCCCTGAGGGCAGCAGTGGGAACAATCG
TGATGACACCCACCCAGTTCAACGAGGTGCACTTCTCTCCACTGGGAACG
TGCTTCTATTTCAGCGAGAATAATGTCCCCAATGATCCACTGACTATGGC
ACTTCTAGAGCGCGAAAAGCTGAATGCAACTAAAACGATTTCATGCATTT
ACTCATAGAAGCTTTCTAGACCAT
BS14731.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:45:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14017-RA | 717 | CG14017-PA | 1..327 | 17..343 | 1635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:45:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14017-RA | 1179 | CG14017-RA | 78..408 | 13..343 | 1655 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:45:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5553974..5554304 | 13..343 | 1655 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 23:45:47 has no hits.
BS14731.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:46:47 Download gff for
BS14731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RB | 1..342 | 17..358 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:34:35 Download gff for
BS14731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RB | 70..424 | 5..359 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:37:16 Download gff for
BS14731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RA | 82..413 | 17..348 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:46:47 Download gff for
BS14731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RB | 70..424 | 5..359 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:07:39 Download gff for
BS14731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14017-RA | 82..413 | 17..348 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:07:39 Download gff for
BS14731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5553978..5554304 | 17..343 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:37:16 Download gff for
BS14731.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5553978..5554304 | 17..343 | 100 | -> | Plus |
BS14731.pep Sequence
Translation from 16 to 357
> BS14731.pep
MEDSQRKHAGSKGFRALENRKQDIAYNHYLNSFVKLEDRRYLPNDNVIHQ
LVPLRAAVGTIVMTPTQFNEVHFSPLGTCFYFSENNVPNDPLTMALLERE
KLNATKTISCIYS*
BS14731.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:26:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14017-PA | 238 | CG14017-PA | 1..111 | 1..111 | 574 | 99.1 | Plus |