Clone Sequence Records
BS14745.3prime Sequence
462 bp (462 high quality bases) assembled on 2006-10-13
> BS14745.3prime
ATGGTCTAGAAAGCTTTTAGTAGTTGGCTCCGCGCTGTATGCAGGGTCCG
CTGGAGATGGATCCCGCCTCCAGGCTCGGACAGTTGACCTTCTGCAGCTC
GGCAATGCGCTGCCATGTCATGTTGAAGTGACGCGCGGAACGGGCATTGG
ATAGCTTGGCGATGGGTCCCAGGGTGCGGTATCCATTGGTAATGAAGCGT
ATGAATCCCTTGGCCGTTAGGTCCAGCAGAGCGGTCTTCACCTGCGACTC
CAGATCGCCACAGGCAAAGGGTTCCTTTTCCAGCATCTCCAGAATGTGCT
CCTCGTGGATACCATTGCTGTACTTGGGATGATCCTGGAAGATGCGCACC
ATGTCCAAAATATATAGCGGCAAATTGATGTGGTAGCTGTTGAAAGGAAG
CCGCAAGGTGGTGGGCTCACATTCCCTGATCGATCCTTCGTCACACATGT
CGACTGATAACT
BS14745.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3687-PA | 432 | CG3687-RA | 1..432 | 448..17 | 2035 | 98.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:19:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3687-RA | 708 | CG3687-RA | 138..581 | 452..9 | 2100 | 98.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:19:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16237089..16237352 | 272..9 | 1215 | 97.3 | Minus |
2R | 25286936 | 2R | 16236852..16237031 | 452..273 | 885 | 99.4 | Minus |
Blast to na_te.dros performed on 2015-02-10 21:19:54 has no hits.
BS14745.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:00 Download gff for
BS14745.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3687-PA | 1..432 | 17..448 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 06:28:01 Download gff for
BS14745.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3687-RA | 135..581 | 9..456 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:35:29 Download gff for
BS14745.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3687-RA | 135..581 | 9..456 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:35:29 Download gff for
BS14745.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16236849..16237031 | 273..456 | 98 | -> | Minus |
2R | 16237089..16237352 | 9..272 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 06:28:01 Download gff for
BS14745.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12124594..12124857 | 9..272 | 97 | | Minus |
arm_2R | 12124354..12124536 | 273..456 | 98 | -> | Minus |
BS14745.5prime Sequence
462 bp (462 high quality bases) assembled on 2006-10-13
> BS14745.5prime
GAAGTTATCAGTCGACATGTGTGACGAAGGATCGATCAGGGAATGTGAGC
CCACCACCTTGCGGCTTCCTTTCAACAGCTACCACATCAATTTGCCGCTA
TATATTTTGGACATGGTGCGCATCTTCCAGGATCATCCCAAGTACAGCAA
TGGTATCCACGAGGAGCACATTCTGGAGATGCTGGAAAAGGAACCCTTTG
CCTGTGGCGATCTGGAGTCGCAGGTGAAGACCGCTCTGCTGGACCTAACG
GCCAAGGGATTCATACGCTTCATTACCAATGGATACCGCACCCTGGGACC
CATCGCCAAGCTATCCAATGCCCGTTCCGCGCGTCACTTCAACATGACAT
GGCAGCGCATTGCCGAGCTGCAGAAGGTCAACTGTCCGAGCCTGGAGGCG
GGATCCATCTCCAGCGGACCCTGCATACAGCGCGGAGCCAACTACTAAAA
GCTTTCTAGACC
BS14745.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3687-PA | 432 | CG3687-RA | 1..432 | 17..448 | 2035 | 98.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:19:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3687-RA | 708 | CG3687-RA | 138..581 | 13..456 | 2100 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:19:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16237089..16237352 | 193..456 | 1215 | 97.3 | Plus |
2R | 25286936 | 2R | 16236852..16237031 | 13..192 | 885 | 99.4 | Plus |
Blast to na_te.dros performed on 2015-02-12 11:19:45 has no hits.
BS14745.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:00 Download gff for
BS14745.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3687-PA | 1..432 | 17..448 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:47:36 Download gff for
BS14745.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3687-RA | 135..581 | 9..456 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:37:33 Download gff for
BS14745.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3687-RA | 135..581 | 9..456 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:37:33 Download gff for
BS14745.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16236849..16237031 | 9..192 | 98 | -> | Plus |
2R | 16237089..16237352 | 193..456 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:47:36 Download gff for
BS14745.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12124354..12124536 | 9..192 | 98 | -> | Plus |
arm_2R | 12124594..12124857 | 193..456 | 97 | | Plus |
BS14745.complete Sequence
464 bp assembled on 2006-11-01
GenBank Submission: FJ637775
> BS14745.complete
GAAGTTATCAGTCGACATGTGTGACGAAGGATCGATCAGGGAATGTGAGC
CCACCACCTTGCGGCTTCCTTTCAACAGCTACCACATCAATTTGCCGCTA
TATATTTTGGACATGGTGCGCATCTTCCAGGATCATCCCAAGTACAGCAA
TGGTATCCACGAGGAGCACATTCTGGAGATGCTGGAAAAGGAACCCTTTG
CCTGTGGCGATCTGGAGTCGCAGGTGAAGACCGCTCTGCTGGACCTAACG
GCCAAGGGATTCATACGCTTCATTACCAATGGATACCGCACCCTGGGACC
CATCGCCAAGCTATCCAATGCCCGTTCCGCGCGTCACTTCAACATGACAT
GGCAGCGCATTGCCGAGCTGCAGAAGGTCAACTGTCCGAGCCTGGAGGCG
GGATCCATCTCCAGCGGACCCTGCATACAGCGCGGAGCCAACTACTAAAA
GCTTTCTAGACCAT
BS14745.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:23:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3687-RA | 432 | CG3687-PA | 1..432 | 17..448 | 2085 | 98.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:23:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3687-RA | 708 | CG3687-RA | 138..581 | 13..456 | 2100 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:23:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16237089..16237352 | 193..456 | 1215 | 97.3 | Plus |
2R | 25286936 | 2R | 16236852..16237031 | 13..192 | 885 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:23:08 has no hits.
BS14745.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:35:27 Download gff for
BS14745.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3687-RA | 1..432 | 17..448 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:08:21 Download gff for
BS14745.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3687-RA | 78..524 | 9..456 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:40:21 Download gff for
BS14745.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3687-RA | 142..571 | 17..446 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:35:27 Download gff for
BS14745.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3687-RA | 78..524 | 9..456 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:06:28 Download gff for
BS14745.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3687-RA | 142..571 | 17..446 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:06:28 Download gff for
BS14745.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16237089..16237342 | 193..446 | 98 | | Plus |
2R | 16236856..16237031 | 17..192 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:40:21 Download gff for
BS14745.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12124361..12124536 | 17..192 | 100 | -> | Plus |
arm_2R | 12124594..12124847 | 193..446 | 98 | | Plus |
BS14745.pep Sequence
Translation from 16 to 447
> BS14745.pep
MCDEGSIRECEPTTLRLPFNSYHINLPLYILDMVRIFQDHPKYSNGIHEE
HILEMLEKEPFACGDLESQVKTALLDLTAKGFIRFITNGYRTLGPIAKLS
NARSARHFNMTWQRIAELQKVNCPSLEAGSISSGPCIQRGANY*
BS14745.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:09:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3687-PA | 143 | CG3687-PA | 1..143 | 1..143 | 761 | 100 | Plus |