Clone BS14745 Report

Search the DGRC for BS14745

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:147
Well:45
Vector:pDNR-Dual
Associated Gene/TranscriptCG3687-RA
Protein status:BS14745.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14745.3prime Sequence

462 bp (462 high quality bases) assembled on 2006-10-13

> BS14745.3prime
ATGGTCTAGAAAGCTTTTAGTAGTTGGCTCCGCGCTGTATGCAGGGTCCG
CTGGAGATGGATCCCGCCTCCAGGCTCGGACAGTTGACCTTCTGCAGCTC
GGCAATGCGCTGCCATGTCATGTTGAAGTGACGCGCGGAACGGGCATTGG
ATAGCTTGGCGATGGGTCCCAGGGTGCGGTATCCATTGGTAATGAAGCGT
ATGAATCCCTTGGCCGTTAGGTCCAGCAGAGCGGTCTTCACCTGCGACTC
CAGATCGCCACAGGCAAAGGGTTCCTTTTCCAGCATCTCCAGAATGTGCT
CCTCGTGGATACCATTGCTGTACTTGGGATGATCCTGGAAGATGCGCACC
ATGTCCAAAATATATAGCGGCAAATTGATGTGGTAGCTGTTGAAAGGAAG
CCGCAAGGTGGTGGGCTCACATTCCCTGATCGATCCTTCGTCACACATGT
CGACTGATAACT

BS14745.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG3687-PA 432 CG3687-RA 1..432 448..17 2035 98.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:19:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG3687-RA 708 CG3687-RA 138..581 452..9 2100 98.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:19:52
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16237089..16237352 272..9 1215 97.3 Minus
2R 25286936 2R 16236852..16237031 452..273 885 99.4 Minus
Blast to na_te.dros performed on 2015-02-10 21:19:54 has no hits.

BS14745.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:00 Download gff for BS14745.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3687-PA 1..432 17..448 98   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 06:28:01 Download gff for BS14745.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3687-RA 135..581 9..456 97   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:35:29 Download gff for BS14745.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3687-RA 135..581 9..456 97   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:35:29 Download gff for BS14745.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 16236849..16237031 273..456 98 -> Minus
2R 16237089..16237352 9..272 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 06:28:01 Download gff for BS14745.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12124594..12124857 9..272 97   Minus
arm_2R 12124354..12124536 273..456 98 -> Minus

BS14745.5prime Sequence

462 bp (462 high quality bases) assembled on 2006-10-13

> BS14745.5prime
GAAGTTATCAGTCGACATGTGTGACGAAGGATCGATCAGGGAATGTGAGC
CCACCACCTTGCGGCTTCCTTTCAACAGCTACCACATCAATTTGCCGCTA
TATATTTTGGACATGGTGCGCATCTTCCAGGATCATCCCAAGTACAGCAA
TGGTATCCACGAGGAGCACATTCTGGAGATGCTGGAAAAGGAACCCTTTG
CCTGTGGCGATCTGGAGTCGCAGGTGAAGACCGCTCTGCTGGACCTAACG
GCCAAGGGATTCATACGCTTCATTACCAATGGATACCGCACCCTGGGACC
CATCGCCAAGCTATCCAATGCCCGTTCCGCGCGTCACTTCAACATGACAT
GGCAGCGCATTGCCGAGCTGCAGAAGGTCAACTGTCCGAGCCTGGAGGCG
GGATCCATCTCCAGCGGACCCTGCATACAGCGCGGAGCCAACTACTAAAA
GCTTTCTAGACC

BS14745.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG3687-PA 432 CG3687-RA 1..432 17..448 2035 98.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:19:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG3687-RA 708 CG3687-RA 138..581 13..456 2100 98.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:19:42
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16237089..16237352 193..456 1215 97.3 Plus
2R 25286936 2R 16236852..16237031 13..192 885 99.4 Plus
Blast to na_te.dros performed on 2015-02-12 11:19:45 has no hits.

BS14745.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:00 Download gff for BS14745.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3687-PA 1..432 17..448 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:47:36 Download gff for BS14745.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3687-RA 135..581 9..456 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:37:33 Download gff for BS14745.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3687-RA 135..581 9..456 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:37:33 Download gff for BS14745.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 16236849..16237031 9..192 98 -> Plus
2R 16237089..16237352 193..456 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:47:36 Download gff for BS14745.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12124354..12124536 9..192 98 -> Plus
arm_2R 12124594..12124857 193..456 97   Plus

BS14745.complete Sequence

464 bp assembled on 2006-11-01

GenBank Submission: FJ637775

> BS14745.complete
GAAGTTATCAGTCGACATGTGTGACGAAGGATCGATCAGGGAATGTGAGC
CCACCACCTTGCGGCTTCCTTTCAACAGCTACCACATCAATTTGCCGCTA
TATATTTTGGACATGGTGCGCATCTTCCAGGATCATCCCAAGTACAGCAA
TGGTATCCACGAGGAGCACATTCTGGAGATGCTGGAAAAGGAACCCTTTG
CCTGTGGCGATCTGGAGTCGCAGGTGAAGACCGCTCTGCTGGACCTAACG
GCCAAGGGATTCATACGCTTCATTACCAATGGATACCGCACCCTGGGACC
CATCGCCAAGCTATCCAATGCCCGTTCCGCGCGTCACTTCAACATGACAT
GGCAGCGCATTGCCGAGCTGCAGAAGGTCAACTGTCCGAGCCTGGAGGCG
GGATCCATCTCCAGCGGACCCTGCATACAGCGCGGAGCCAACTACTAAAA
GCTTTCTAGACCAT

BS14745.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:23:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG3687-RA 432 CG3687-PA 1..432 17..448 2085 98.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:23:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG3687-RA 708 CG3687-RA 138..581 13..456 2100 98.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:23:08
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16237089..16237352 193..456 1215 97.3 Plus
2R 25286936 2R 16236852..16237031 13..192 885 99.4 Plus
Blast to na_te.dros performed on 2014-11-27 15:23:08 has no hits.

BS14745.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:35:27 Download gff for BS14745.complete
Subject Subject Range Query Range Percent Splice Strand
CG3687-RA 1..432 17..448 98   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:08:21 Download gff for BS14745.complete
Subject Subject Range Query Range Percent Splice Strand
CG3687-RA 78..524 9..456 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:40:21 Download gff for BS14745.complete
Subject Subject Range Query Range Percent Splice Strand
CG3687-RA 142..571 17..446 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:35:27 Download gff for BS14745.complete
Subject Subject Range Query Range Percent Splice Strand
CG3687-RA 78..524 9..456 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:06:28 Download gff for BS14745.complete
Subject Subject Range Query Range Percent Splice Strand
CG3687-RA 142..571 17..446 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:06:28 Download gff for BS14745.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16237089..16237342 193..446 98   Plus
2R 16236856..16237031 17..192 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:40:21 Download gff for BS14745.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12124361..12124536 17..192 100 -> Plus
arm_2R 12124594..12124847 193..446 98   Plus

BS14745.pep Sequence

Translation from 16 to 447

> BS14745.pep
MCDEGSIRECEPTTLRLPFNSYHINLPLYILDMVRIFQDHPKYSNGIHEE
HILEMLEKEPFACGDLESQVKTALLDLTAKGFIRFITNGYRTLGPIAKLS
NARSARHFNMTWQRIAELQKVNCPSLEAGSISSGPCIQRGANY*

BS14745.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:09:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG3687-PA 143 CG3687-PA 1..143 1..143 761 100 Plus