Clone BS14747 Report

Search the DGRC for BS14747

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:147
Well:47
Vector:pDNR-Dual
Associated Gene/TranscriptCG31802-RA
Protein status:BS14747.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14747.3prime Sequence

591 bp (591 high quality bases) assembled on 2006-10-13

> BS14747.3prime
ATGGTCTAGAAAGCTTCTAGATGAGATTGGTTTTCTTGATAAGGTTGAGA
AACTCCTCCTTGCTAACCTCACCATCACCGGAAACGTTGGCTTCGTCGAT
CATCTCCTGCAGTTCCTCGTCGGTGAGCTGTTCGCCCAGCTCCTTGGCCA
CGCGTTTCAAGTTGAGGAAGGATATGCCGCCGGTGCGATCGTCATCGAAG
AAGGAAAAGGCCTTCATCATATCCTGATTAGAGTCCTTTTCCGCCATCTT
CAGGCGCATCAGATATAGAAAATCGTTAAAGGCAATCCTTCCCGTCTTGT
CCTTATCGATTTCGTCCATCATACGCTTTATATCCTCTTTCTTCGGCTCG
AATCCCAGGGCACGAATGGCCACGCGAAGCTCCTTGGTTTCGATAAAGCC
CGTGCACTGGGTGTCGAACAAATCGAAGGCTTTCTTAATGTCCACCTTCT
GGCTTAGCGACAGGTCAAAGGTCGGCAGTTTGGGCTTTTTCGATTTTTTA
GCCCTGCTTGAGATCGATGCACTCGAATGCATTACACTGGCGGAGGACAC
CATACTACCAAGTCGTTTGCCGGACATGTCGACTGATAACT

BS14747.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG31802-PA 561 CG31802-RA 1..561 577..17 2805 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:13:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG31802-RA 823 CG31802-RA 89..650 578..17 2810 100 Minus
CG17493-RD 5997 CG17493-RD 384..598 442..228 190 72.6 Minus
CG17493-RC 1364 CG17493-RC 384..598 442..228 190 72.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:13:20
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18208588..18209149 17..578 2810 100 Plus
2L 23513712 2L 22550682..22550896 442..228 190 72.6 Minus
Blast to na_te.dros performed on 2015-02-11 09:13:21 has no hits.

BS14747.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:01 Download gff for BS14747.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31802-PA 1..561 17..577 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 17:03:59 Download gff for BS14747.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31802-RA 79..657 10..587 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:27:07 Download gff for BS14747.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31802-RA 79..657 10..587 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:27:07 Download gff for BS14747.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 18208581..18209154 10..587 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 17:03:59 Download gff for BS14747.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18208581..18209154 10..587 98   Plus

BS14747.5prime Sequence

591 bp (591 high quality bases) assembled on 2006-10-13

> BS14747.5prime
GAAGTTATCAGTCGACATGTCCGGCAAACGACTTGGTAGTATGGTGTCCT
CCGCCAGTGTAATGCATTCGAGTGCATCGATCTCAAGCAGGGCTAAAAAA
TCGAAAAAGCCCAAACTGCCGACCTTTGACCTGTCGCTAAGCCAGAAGGT
GGACATTAAGAAAGCCTTCGATTTGTTCGACACCCAGTGCACGGGCTTTA
TCGAAACCAAGGAGCTTCGCGTGGCCATTCGTGCCCTGGGATTCGAGCCG
AAGAAAGAGGATATAAAGCGTATGATGGACGAAATCGATAAGGACAAGAC
GGGAAGGATTGCCTTTAACGATTTTCTATATCTGATGCGCCTGAAGATGG
CGGAAAAGGACTCTAATCAGGATATGATGAAGGCCTTTTCCTTCTTCGAT
GACGATCGCACCGGCGGCATATCCTTCCTCAACTTGAAACGCGTGGCCAA
GGAGCTGGGCGAACAGCTCACCGACGAGGAACTGCAGGAGATGATCGACG
AAGCCAACGTTTCCGGTGATGGTGAGGTTAGCAAGGAGGAGTTTCTCAAC
CTTATCAAGAAAACCAATCTCATCTAGAAGCTTTCTAGACC

BS14747.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG31802-PA 561 CG31802-RA 1..561 17..577 2805 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:15:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG31802-RA 823 CG31802-RA 89..650 16..577 2810 100 Plus
CG17493-RD 5997 CG17493-RD 384..598 152..366 190 72.6 Plus
CG17493-RC 1364 CG17493-RC 384..598 152..366 190 72.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:15:25
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18208588..18209149 577..16 2810 100 Minus
2L 23513712 2L 22550682..22550896 152..366 190 72.6 Plus
Blast to na_te.dros performed on 2015-02-10 17:15:30 has no hits.

BS14747.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:01 Download gff for BS14747.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31802-PA 1..561 17..577 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:24:15 Download gff for BS14747.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31802-RA 79..657 7..584 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:08:16 Download gff for BS14747.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31802-RA 79..657 7..584 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:08:16 Download gff for BS14747.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 18208581..18209154 7..584 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:24:15 Download gff for BS14747.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18208581..18209154 7..584 98   Minus

BS14747.complete Sequence

593 bp assembled on 2006-11-01

GenBank Submission: FJ637777

> BS14747.complete
GAAGTTATCAGTCGACATGTCCGGCAAACGACTTGGTAGTATGGTGTCCT
CCGCCAGTGTAATGCATTCGAGTGCATCGATCTCAAGCAGGGCTAAAAAA
TCGAAAAAGCCCAAACTGCCGACCTTTGACCTGTCGCTAAGCCAGAAGGT
GGACATTAAGAAAGCCTTCGATTTGTTCGACACCCAGTGCACGGGCTTTA
TCGAAACCAAGGAGCTTCGCGTGGCCATTCGTGCCCTGGGATTCGAGCCG
AAGAAAGAGGATATAAAGCGTATGATGGACGAAATCGATAAGGACAAGAC
GGGAAGGATTGCCTTTAACGATTTTCTATATCTGATGCGCCTGAAGATGG
CGGAAAAGGACTCTAATCAGGATATGATGAAGGCCTTTTCCTTCTTCGAT
GACGATCGCACCGGCGGCATATCCTTCCTCAACTTGAAACGCGTGGCCAA
GGAGCTGGGCGAACAGCTCACCGACGAGGAACTGCAGGAGATGATCGACG
AAGCCAACGTTTCCGGTGATGGTGAGGTTAGCAAGGAGGAGTTTCTCAAC
CTTATCAAGAAAACCAATCTCATCTAGAAGCTTTCTAGACCAT

BS14747.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:01:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG31802-RA 561 CG31802-PA 1..561 17..577 2805 100 Plus
CG17493-RD 549 CG17493-PD 124..338 152..366 190 72.6 Plus
CG17493-RC 549 CG17493-PC 124..338 152..366 190 72.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:01:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG31802-RA 823 CG31802-RA 89..650 16..577 2810 100 Plus
CG17493-RD 5997 CG17493-RD 384..598 152..366 190 72.6 Plus
CG17493-RC 1364 CG17493-RC 384..598 152..366 190 72.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:01:11
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18208588..18209149 577..16 2810 100 Minus
2L 23513712 2L 22550682..22550896 152..366 190 72.6 Plus
Blast to na_te.dros performed on 2014-11-28 00:01:12 has no hits.

BS14747.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:35:11 Download gff for BS14747.complete
Subject Subject Range Query Range Percent Splice Strand
CG31802-RA 1..561 17..577 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:08:03 Download gff for BS14747.complete
Subject Subject Range Query Range Percent Splice Strand
CG31802-RA 79..657 7..584 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:16:07 Download gff for BS14747.complete
Subject Subject Range Query Range Percent Splice Strand
CG31802-RA 90..650 17..577 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:35:11 Download gff for BS14747.complete
Subject Subject Range Query Range Percent Splice Strand
CG31802-RA 79..657 7..584 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:24:46 Download gff for BS14747.complete
Subject Subject Range Query Range Percent Splice Strand
CG31802-RA 90..650 17..577 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:24:46 Download gff for BS14747.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18208588..18209148 17..577 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:16:07 Download gff for BS14747.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18208588..18209148 17..577 100   Minus

BS14747.pep Sequence

Translation from 16 to 576

> BS14747.pep
MSGKRLGSMVSSASVMHSSASISSRAKKSKKPKLPTFDLSLSQKVDIKKA
FDLFDTQCTGFIETKELRVAIRALGFEPKKEDIKRMMDEIDKDKTGRIAF
NDFLYLMRLKMAEKDSNQDMMKAFSFFDDDRTGGISFLNLKRVAKELGEQ
LTDEELQEMIDEANVSGDGEVSKEEFLNLIKKTNLI*

BS14747.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:10:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG31802-PA 186 CG31802-PA 1..186 1..186 925 100 Plus
CG17493-PD 182 CG17493-PD 23..181 27..185 544 66.7 Plus
CG17493-PC 182 CG17493-PC 23..181 27..185 544 66.7 Plus
CG17493-PB 182 CG17493-PB 23..181 27..185 544 66.7 Plus
Cam-PD 149 CG8472-PD 5..146 39..180 303 43.7 Plus