Clone Sequence Records
BS14747.3prime Sequence
591 bp (591 high quality bases) assembled on 2006-10-13
> BS14747.3prime
ATGGTCTAGAAAGCTTCTAGATGAGATTGGTTTTCTTGATAAGGTTGAGA
AACTCCTCCTTGCTAACCTCACCATCACCGGAAACGTTGGCTTCGTCGAT
CATCTCCTGCAGTTCCTCGTCGGTGAGCTGTTCGCCCAGCTCCTTGGCCA
CGCGTTTCAAGTTGAGGAAGGATATGCCGCCGGTGCGATCGTCATCGAAG
AAGGAAAAGGCCTTCATCATATCCTGATTAGAGTCCTTTTCCGCCATCTT
CAGGCGCATCAGATATAGAAAATCGTTAAAGGCAATCCTTCCCGTCTTGT
CCTTATCGATTTCGTCCATCATACGCTTTATATCCTCTTTCTTCGGCTCG
AATCCCAGGGCACGAATGGCCACGCGAAGCTCCTTGGTTTCGATAAAGCC
CGTGCACTGGGTGTCGAACAAATCGAAGGCTTTCTTAATGTCCACCTTCT
GGCTTAGCGACAGGTCAAAGGTCGGCAGTTTGGGCTTTTTCGATTTTTTA
GCCCTGCTTGAGATCGATGCACTCGAATGCATTACACTGGCGGAGGACAC
CATACTACCAAGTCGTTTGCCGGACATGTCGACTGATAACT
BS14747.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31802-PA | 561 | CG31802-RA | 1..561 | 577..17 | 2805 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:13:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31802-RA | 823 | CG31802-RA | 89..650 | 578..17 | 2810 | 100 | Minus |
CG17493-RD | 5997 | CG17493-RD | 384..598 | 442..228 | 190 | 72.6 | Minus |
CG17493-RC | 1364 | CG17493-RC | 384..598 | 442..228 | 190 | 72.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:13:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18208588..18209149 | 17..578 | 2810 | 100 | Plus |
2L | 23513712 | 2L | 22550682..22550896 | 442..228 | 190 | 72.6 | Minus |
Blast to na_te.dros performed on 2015-02-11 09:13:21 has no hits.
BS14747.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:01 Download gff for
BS14747.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31802-PA | 1..561 | 17..577 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 17:03:59 Download gff for
BS14747.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31802-RA | 79..657 | 10..587 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:27:07 Download gff for
BS14747.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31802-RA | 79..657 | 10..587 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:27:07 Download gff for
BS14747.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18208581..18209154 | 10..587 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 17:03:59 Download gff for
BS14747.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18208581..18209154 | 10..587 | 98 | | Plus |
BS14747.5prime Sequence
591 bp (591 high quality bases) assembled on 2006-10-13
> BS14747.5prime
GAAGTTATCAGTCGACATGTCCGGCAAACGACTTGGTAGTATGGTGTCCT
CCGCCAGTGTAATGCATTCGAGTGCATCGATCTCAAGCAGGGCTAAAAAA
TCGAAAAAGCCCAAACTGCCGACCTTTGACCTGTCGCTAAGCCAGAAGGT
GGACATTAAGAAAGCCTTCGATTTGTTCGACACCCAGTGCACGGGCTTTA
TCGAAACCAAGGAGCTTCGCGTGGCCATTCGTGCCCTGGGATTCGAGCCG
AAGAAAGAGGATATAAAGCGTATGATGGACGAAATCGATAAGGACAAGAC
GGGAAGGATTGCCTTTAACGATTTTCTATATCTGATGCGCCTGAAGATGG
CGGAAAAGGACTCTAATCAGGATATGATGAAGGCCTTTTCCTTCTTCGAT
GACGATCGCACCGGCGGCATATCCTTCCTCAACTTGAAACGCGTGGCCAA
GGAGCTGGGCGAACAGCTCACCGACGAGGAACTGCAGGAGATGATCGACG
AAGCCAACGTTTCCGGTGATGGTGAGGTTAGCAAGGAGGAGTTTCTCAAC
CTTATCAAGAAAACCAATCTCATCTAGAAGCTTTCTAGACC
BS14747.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31802-PA | 561 | CG31802-RA | 1..561 | 17..577 | 2805 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:15:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31802-RA | 823 | CG31802-RA | 89..650 | 16..577 | 2810 | 100 | Plus |
CG17493-RD | 5997 | CG17493-RD | 384..598 | 152..366 | 190 | 72.6 | Plus |
CG17493-RC | 1364 | CG17493-RC | 384..598 | 152..366 | 190 | 72.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:15:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18208588..18209149 | 577..16 | 2810 | 100 | Minus |
2L | 23513712 | 2L | 22550682..22550896 | 152..366 | 190 | 72.6 | Plus |
Blast to na_te.dros performed on 2015-02-10 17:15:30 has no hits.
BS14747.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:01 Download gff for
BS14747.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31802-PA | 1..561 | 17..577 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:24:15 Download gff for
BS14747.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31802-RA | 79..657 | 7..584 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:08:16 Download gff for
BS14747.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31802-RA | 79..657 | 7..584 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:08:16 Download gff for
BS14747.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18208581..18209154 | 7..584 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:24:15 Download gff for
BS14747.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18208581..18209154 | 7..584 | 98 | | Minus |
BS14747.complete Sequence
593 bp assembled on 2006-11-01
GenBank Submission: FJ637777
> BS14747.complete
GAAGTTATCAGTCGACATGTCCGGCAAACGACTTGGTAGTATGGTGTCCT
CCGCCAGTGTAATGCATTCGAGTGCATCGATCTCAAGCAGGGCTAAAAAA
TCGAAAAAGCCCAAACTGCCGACCTTTGACCTGTCGCTAAGCCAGAAGGT
GGACATTAAGAAAGCCTTCGATTTGTTCGACACCCAGTGCACGGGCTTTA
TCGAAACCAAGGAGCTTCGCGTGGCCATTCGTGCCCTGGGATTCGAGCCG
AAGAAAGAGGATATAAAGCGTATGATGGACGAAATCGATAAGGACAAGAC
GGGAAGGATTGCCTTTAACGATTTTCTATATCTGATGCGCCTGAAGATGG
CGGAAAAGGACTCTAATCAGGATATGATGAAGGCCTTTTCCTTCTTCGAT
GACGATCGCACCGGCGGCATATCCTTCCTCAACTTGAAACGCGTGGCCAA
GGAGCTGGGCGAACAGCTCACCGACGAGGAACTGCAGGAGATGATCGACG
AAGCCAACGTTTCCGGTGATGGTGAGGTTAGCAAGGAGGAGTTTCTCAAC
CTTATCAAGAAAACCAATCTCATCTAGAAGCTTTCTAGACCAT
BS14747.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:01:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31802-RA | 561 | CG31802-PA | 1..561 | 17..577 | 2805 | 100 | Plus |
CG17493-RD | 549 | CG17493-PD | 124..338 | 152..366 | 190 | 72.6 | Plus |
CG17493-RC | 549 | CG17493-PC | 124..338 | 152..366 | 190 | 72.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:01:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31802-RA | 823 | CG31802-RA | 89..650 | 16..577 | 2810 | 100 | Plus |
CG17493-RD | 5997 | CG17493-RD | 384..598 | 152..366 | 190 | 72.6 | Plus |
CG17493-RC | 1364 | CG17493-RC | 384..598 | 152..366 | 190 | 72.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:01:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18208588..18209149 | 577..16 | 2810 | 100 | Minus |
2L | 23513712 | 2L | 22550682..22550896 | 152..366 | 190 | 72.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:01:12 has no hits.
BS14747.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:35:11 Download gff for
BS14747.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31802-RA | 1..561 | 17..577 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:08:03 Download gff for
BS14747.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31802-RA | 79..657 | 7..584 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:16:07 Download gff for
BS14747.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31802-RA | 90..650 | 17..577 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:35:11 Download gff for
BS14747.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31802-RA | 79..657 | 7..584 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:24:46 Download gff for
BS14747.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31802-RA | 90..650 | 17..577 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:24:46 Download gff for
BS14747.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18208588..18209148 | 17..577 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:16:07 Download gff for
BS14747.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18208588..18209148 | 17..577 | 100 | | Minus |
BS14747.pep Sequence
Translation from 16 to 576
> BS14747.pep
MSGKRLGSMVSSASVMHSSASISSRAKKSKKPKLPTFDLSLSQKVDIKKA
FDLFDTQCTGFIETKELRVAIRALGFEPKKEDIKRMMDEIDKDKTGRIAF
NDFLYLMRLKMAEKDSNQDMMKAFSFFDDDRTGGISFLNLKRVAKELGEQ
LTDEELQEMIDEANVSGDGEVSKEEFLNLIKKTNLI*
BS14747.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:10:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31802-PA | 186 | CG31802-PA | 1..186 | 1..186 | 925 | 100 | Plus |
CG17493-PD | 182 | CG17493-PD | 23..181 | 27..185 | 544 | 66.7 | Plus |
CG17493-PC | 182 | CG17493-PC | 23..181 | 27..185 | 544 | 66.7 | Plus |
CG17493-PB | 182 | CG17493-PB | 23..181 | 27..185 | 544 | 66.7 | Plus |
Cam-PD | 149 | CG8472-PD | 5..146 | 39..180 | 303 | 43.7 | Plus |