Clone BS14759 Report

Search the DGRC for BS14759

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:147
Well:59
Vector:pDNR-Dual
Associated Gene/TranscriptCG15676-RA
Protein status:BS14759.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14759.3prime Sequence

579 bp (579 high quality bases) assembled on 2006-10-13

> BS14759.3prime
ATGGTCTAGAAAGCTTCTAGTTCTCCACTTCATGTTTATACAATACGGCT
AGGTTCATCTCAATCGTGTTCACCTGATCCTGCAGATAGTCGATATCGTG
CTCATGTTGCAATTGCTGCTTCACCAGGCTGGTGATGTCCTTTTTGATGA
ACTCCTCCGCCTCGGACAGCTCGAATTCCATTTGCAGAGATGCGCCCACT
TGAAGGGTAACCTTTTGCACTGGCGGTATGCTCACCCATCTGAATACTCC
CTGTGCGATTTGCACGAGGCTGTGAACTTCCTTGTCAGGATTGTCTATGA
ACCTCCTCACCAATTCCAAATTATTTTTGGCAGCCTCCAAACGGGTTAAC
ACTGCTGTGAGGTCAGTCTCCAACTTGGCAGCCAGTTCGCTGTATTGCAC
ATAGAAAAGGCGTTGCATCTTCAATGCCGCTGGAACAGTCGAATAGAACT
CTGGCTTGGCGATGTAGCTGACGACATCGTCAACTAACTTGGCCTCTGGG
ATGGGCATAAATGACTTTCGGCCGCCCAGAGGCGGCTTTTTTATGGTGTC
TATGAATGCAAACATGTCGACTGATAACT

BS14759.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG15676-PA 549 CG15676-RA 1..549 565..17 2745 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:50:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG15676-RB 1146 CG15676-RB 30..582 565..13 2765 100 Minus
CG15676-RA 644 CG15676-RA 30..582 565..13 2765 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:50:30
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21671729..21672281 565..13 2765 100 Minus
Blast to na_te.dros performed on 2015-02-10 16:50:35 has no hits.

BS14759.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:08 Download gff for BS14759.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15676-PA 1..549 17..565 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 20:15:49 Download gff for BS14759.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15676-RA 30..582 13..565 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:50:49 Download gff for BS14759.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15676-RA 30..582 13..565 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:50:49 Download gff for BS14759.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 21671729..21672281 13..565 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 20:15:49 Download gff for BS14759.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17559234..17559786 13..565 100   Minus

BS14759.5prime Sequence

579 bp (579 high quality bases) assembled on 2006-10-13

> BS14759.5prime
GAAGTTATCAGTCGACATGTTTGCATTCATAGACACCATAAAAAAGCCGC
CTCTGGGCGGCCGAAAGTCATTTATGCCCATCCCAGAGGCCAAGTTAGTT
GACGATGTCGTCAGCTACATCGCCAAGCCAGAGTTCTATTCGACTGTTCC
AGCGGCATTGAAGATGCAACGCCTTTTCTATGTGCAATACAGCGAACTGG
CTGCCAAGTTGGAGACTGACCTCACAGCAGTGTTAACCCGTTTGGAGGCT
GCCAAAAATAATTTGGAATTGGTGAGGAGGTTCATAGACAATCCTGACAA
GGAAGTTCACAGCCTCGTGCAAATCGCACAGGGAGTATTCAGATGGGTGA
GCATACCGCCAGTGCAAAAGGTTACCCTTCAAGTGGGCGCATCTCTGCAA
ATGGAATTCGAGCTGTCCGAGGCGGAGGAGTTCATCAAAAAGGACATCAC
CAGCCTGGTGAAGCAGCAATTGCAACATGAGCACGATATCGACTATCTGC
AGGATCAGGTGAACACGATTGAGATGAACCTAGCCGTATTGTATAAACAT
GAAGTGGAGAACTAGAAGCTTTCTAGACC

BS14759.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG15676-PA 549 CG15676-RA 1..549 17..565 2745 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:04:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG15676-RB 1146 CG15676-RB 30..582 17..569 2765 100 Plus
CG15676-RA 644 CG15676-RA 30..582 17..569 2765 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:04:49
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21671729..21672281 17..569 2765 100 Plus
Blast to na_te.dros performed on 2015-02-10 18:04:51 has no hits.

BS14759.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:09 Download gff for BS14759.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15676-PA 1..549 17..565 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:44:33 Download gff for BS14759.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15676-RA 30..582 17..569 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:17:53 Download gff for BS14759.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15676-RA 30..582 17..569 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:17:53 Download gff for BS14759.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 21671729..21672281 17..569 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:44:33 Download gff for BS14759.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17559234..17559786 17..569 100   Plus

BS14759.complete Sequence

581 bp assembled on 2006-11-01

GenBank Submission: FJ637779

> BS14759.complete
GAAGTTATCAGTCGACATGTTTGCATTCATAGACACCATAAAAAAGCCGC
CTCTGGGCGGCCGAAAGTCATTTATGCCCATCCCAGAGGCCAAGTTAGTT
GACGATGTCGTCAGCTACATCGCCAAGCCAGAGTTCTATTCGACTGTTCC
AGCGGCATTGAAGATGCAACGCCTTTTCTATGTGCAATACAGCGAACTGG
CTGCCAAGTTGGAGACTGACCTCACAGCAGTGTTAACCCGTTTGGAGGCT
GCCAAAAATAATTTGGAATTGGTGAGGAGGTTCATAGACAATCCTGACAA
GGAAGTTCACAGCCTCGTGCAAATCGCACAGGGAGTATTCAGATGGGTGA
GCATACCGCCAGTGCAAAAGGTTACCCTTCAAGTGGGCGCATCTCTGCAA
ATGGAATTCGAGCTGTCCGAGGCGGAGGAGTTCATCAAAAAGGACATCAC
CAGCCTGGTGAAGCAGCAATTGCAACATGAGCACGATATCGACTATCTGC
AGGATCAGGTGAACACGATTGAGATGAACCTAGCCGTATTGTATAAACAT
GAAGTGGAGAACTAGAAGCTTTCTAGACCAT

BS14759.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:53:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG15676-RB 549 CG15676-PB 1..549 17..565 2745 100 Plus
CG15676-RA 549 CG15676-PA 1..549 17..565 2745 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:53:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG15676-RB 1146 CG15676-RB 30..582 17..569 2765 100 Plus
CG15676-RA 644 CG15676-RA 30..582 17..569 2765 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:53:17
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21671729..21672281 17..569 2765 100 Plus
Blast to na_te.dros performed on 2014-11-27 19:53:18 has no hits.

BS14759.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:35:13 Download gff for BS14759.complete
Subject Subject Range Query Range Percent Splice Strand
CG15676-RA 1..549 17..565 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:54:18 Download gff for BS14759.complete
Subject Subject Range Query Range Percent Splice Strand
CG15676-RA 30..582 17..569 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:04:17 Download gff for BS14759.complete
Subject Subject Range Query Range Percent Splice Strand
CG15676-RA 36..578 23..565 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:35:13 Download gff for BS14759.complete
Subject Subject Range Query Range Percent Splice Strand
CG15676-RA 30..582 17..569 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:10:10 Download gff for BS14759.complete
Subject Subject Range Query Range Percent Splice Strand
CG15676-RA 36..578 23..565 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:10:10 Download gff for BS14759.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21671735..21672277 23..565 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:04:17 Download gff for BS14759.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17559240..17559782 23..565 100   Plus

BS14759.pep Sequence

Translation from 16 to 564

> BS14759.pep
MFAFIDTIKKPPLGGRKSFMPIPEAKLVDDVVSYIAKPEFYSTVPAALKM
QRLFYVQYSELAAKLETDLTAVLTRLEAAKNNLELVRRFIDNPDKEVHSL
VQIAQGVFRWVSIPPVQKVTLQVGASLQMEFELSEAEEFIKKDITSLVKQ
QLQHEHDIDYLQDQVNTIEMNLAVLYKHEVEN*

BS14759.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:10:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG15676-PB 182 CG15676-PB 1..182 1..182 915 100 Plus
CG15676-PA 182 CG15676-PA 1..182 1..182 915 100 Plus
mgr-PA 194 CG6719-PA 1..180 1..181 209 28.6 Plus