Clone Sequence Records
BS14759.3prime Sequence
579 bp (579 high quality bases) assembled on 2006-10-13
> BS14759.3prime
ATGGTCTAGAAAGCTTCTAGTTCTCCACTTCATGTTTATACAATACGGCT
AGGTTCATCTCAATCGTGTTCACCTGATCCTGCAGATAGTCGATATCGTG
CTCATGTTGCAATTGCTGCTTCACCAGGCTGGTGATGTCCTTTTTGATGA
ACTCCTCCGCCTCGGACAGCTCGAATTCCATTTGCAGAGATGCGCCCACT
TGAAGGGTAACCTTTTGCACTGGCGGTATGCTCACCCATCTGAATACTCC
CTGTGCGATTTGCACGAGGCTGTGAACTTCCTTGTCAGGATTGTCTATGA
ACCTCCTCACCAATTCCAAATTATTTTTGGCAGCCTCCAAACGGGTTAAC
ACTGCTGTGAGGTCAGTCTCCAACTTGGCAGCCAGTTCGCTGTATTGCAC
ATAGAAAAGGCGTTGCATCTTCAATGCCGCTGGAACAGTCGAATAGAACT
CTGGCTTGGCGATGTAGCTGACGACATCGTCAACTAACTTGGCCTCTGGG
ATGGGCATAAATGACTTTCGGCCGCCCAGAGGCGGCTTTTTTATGGTGTC
TATGAATGCAAACATGTCGACTGATAACT
BS14759.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15676-PA | 549 | CG15676-RA | 1..549 | 565..17 | 2745 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:50:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15676-RB | 1146 | CG15676-RB | 30..582 | 565..13 | 2765 | 100 | Minus |
CG15676-RA | 644 | CG15676-RA | 30..582 | 565..13 | 2765 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:50:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21671729..21672281 | 565..13 | 2765 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 16:50:35 has no hits.
BS14759.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:08 Download gff for
BS14759.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15676-PA | 1..549 | 17..565 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 20:15:49 Download gff for
BS14759.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15676-RA | 30..582 | 13..565 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:50:49 Download gff for
BS14759.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15676-RA | 30..582 | 13..565 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:50:49 Download gff for
BS14759.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21671729..21672281 | 13..565 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 20:15:49 Download gff for
BS14759.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17559234..17559786 | 13..565 | 100 | | Minus |
BS14759.5prime Sequence
579 bp (579 high quality bases) assembled on 2006-10-13
> BS14759.5prime
GAAGTTATCAGTCGACATGTTTGCATTCATAGACACCATAAAAAAGCCGC
CTCTGGGCGGCCGAAAGTCATTTATGCCCATCCCAGAGGCCAAGTTAGTT
GACGATGTCGTCAGCTACATCGCCAAGCCAGAGTTCTATTCGACTGTTCC
AGCGGCATTGAAGATGCAACGCCTTTTCTATGTGCAATACAGCGAACTGG
CTGCCAAGTTGGAGACTGACCTCACAGCAGTGTTAACCCGTTTGGAGGCT
GCCAAAAATAATTTGGAATTGGTGAGGAGGTTCATAGACAATCCTGACAA
GGAAGTTCACAGCCTCGTGCAAATCGCACAGGGAGTATTCAGATGGGTGA
GCATACCGCCAGTGCAAAAGGTTACCCTTCAAGTGGGCGCATCTCTGCAA
ATGGAATTCGAGCTGTCCGAGGCGGAGGAGTTCATCAAAAAGGACATCAC
CAGCCTGGTGAAGCAGCAATTGCAACATGAGCACGATATCGACTATCTGC
AGGATCAGGTGAACACGATTGAGATGAACCTAGCCGTATTGTATAAACAT
GAAGTGGAGAACTAGAAGCTTTCTAGACC
BS14759.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15676-PA | 549 | CG15676-RA | 1..549 | 17..565 | 2745 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:04:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15676-RB | 1146 | CG15676-RB | 30..582 | 17..569 | 2765 | 100 | Plus |
CG15676-RA | 644 | CG15676-RA | 30..582 | 17..569 | 2765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:04:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21671729..21672281 | 17..569 | 2765 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:04:51 has no hits.
BS14759.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:09 Download gff for
BS14759.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15676-PA | 1..549 | 17..565 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:44:33 Download gff for
BS14759.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15676-RA | 30..582 | 17..569 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:17:53 Download gff for
BS14759.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15676-RA | 30..582 | 17..569 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:17:53 Download gff for
BS14759.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21671729..21672281 | 17..569 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:44:33 Download gff for
BS14759.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17559234..17559786 | 17..569 | 100 | | Plus |
BS14759.complete Sequence
581 bp assembled on 2006-11-01
GenBank Submission: FJ637779
> BS14759.complete
GAAGTTATCAGTCGACATGTTTGCATTCATAGACACCATAAAAAAGCCGC
CTCTGGGCGGCCGAAAGTCATTTATGCCCATCCCAGAGGCCAAGTTAGTT
GACGATGTCGTCAGCTACATCGCCAAGCCAGAGTTCTATTCGACTGTTCC
AGCGGCATTGAAGATGCAACGCCTTTTCTATGTGCAATACAGCGAACTGG
CTGCCAAGTTGGAGACTGACCTCACAGCAGTGTTAACCCGTTTGGAGGCT
GCCAAAAATAATTTGGAATTGGTGAGGAGGTTCATAGACAATCCTGACAA
GGAAGTTCACAGCCTCGTGCAAATCGCACAGGGAGTATTCAGATGGGTGA
GCATACCGCCAGTGCAAAAGGTTACCCTTCAAGTGGGCGCATCTCTGCAA
ATGGAATTCGAGCTGTCCGAGGCGGAGGAGTTCATCAAAAAGGACATCAC
CAGCCTGGTGAAGCAGCAATTGCAACATGAGCACGATATCGACTATCTGC
AGGATCAGGTGAACACGATTGAGATGAACCTAGCCGTATTGTATAAACAT
GAAGTGGAGAACTAGAAGCTTTCTAGACCAT
BS14759.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:53:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15676-RB | 549 | CG15676-PB | 1..549 | 17..565 | 2745 | 100 | Plus |
CG15676-RA | 549 | CG15676-PA | 1..549 | 17..565 | 2745 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:53:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15676-RB | 1146 | CG15676-RB | 30..582 | 17..569 | 2765 | 100 | Plus |
CG15676-RA | 644 | CG15676-RA | 30..582 | 17..569 | 2765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:53:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21671729..21672281 | 17..569 | 2765 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 19:53:18 has no hits.
BS14759.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:35:13 Download gff for
BS14759.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15676-RA | 1..549 | 17..565 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:54:18 Download gff for
BS14759.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15676-RA | 30..582 | 17..569 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:04:17 Download gff for
BS14759.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15676-RA | 36..578 | 23..565 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:35:13 Download gff for
BS14759.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15676-RA | 30..582 | 17..569 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:10:10 Download gff for
BS14759.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15676-RA | 36..578 | 23..565 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:10:10 Download gff for
BS14759.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21671735..21672277 | 23..565 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:04:17 Download gff for
BS14759.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17559240..17559782 | 23..565 | 100 | | Plus |
BS14759.pep Sequence
Translation from 16 to 564
> BS14759.pep
MFAFIDTIKKPPLGGRKSFMPIPEAKLVDDVVSYIAKPEFYSTVPAALKM
QRLFYVQYSELAAKLETDLTAVLTRLEAAKNNLELVRRFIDNPDKEVHSL
VQIAQGVFRWVSIPPVQKVTLQVGASLQMEFELSEAEEFIKKDITSLVKQ
QLQHEHDIDYLQDQVNTIEMNLAVLYKHEVEN*
BS14759.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:10:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15676-PB | 182 | CG15676-PB | 1..182 | 1..182 | 915 | 100 | Plus |
CG15676-PA | 182 | CG15676-PA | 1..182 | 1..182 | 915 | 100 | Plus |
mgr-PA | 194 | CG6719-PA | 1..180 | 1..181 | 209 | 28.6 | Plus |