Clone BS14767 Report

Search the DGRC for BS14767

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:147
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG7514-RA
Protein status:BS14767.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14767.3prime Sequence

742 bp (740 high quality bases) assembled on 2006-10-13

> BS14767.3prime
ATGGTCTAGAAAGCTTTTAGATGTTCGATTCAGAATCGTCGCCGAGCACA
ATGTGCTTGTAGGCCTTGGTGAGTTGTTCCAGGAATATAAAGGCAAACAC
CGTGTGCGGTCCTAAGCGACACAAATAGGGCGTGAAGCCCTTCCATAGGG
AGGCGATACCCTCATTCTTGGAGACCTTCATCAGGACATCCATGGTGCCC
TTGTACTCGGCCGTCTTTTGCTGCTGGATGCGCGTTTTGGCCATGTCCAG
TGGCATTGAGGCAATGGTGGTCAATAGACCGGACATCATGGCGGCAGCGA
TGTGAAGCGAAAGTCCCGAAAAGTATTCCGAAAATGCTGCCTTTAACTGC
GAGTACGAGGCCAGCTGAACCATGTTGACGATCATGGCCCGACCCACAGT
GGGCATGCATCCTTTCCAGAGGGTGATCACGCCCTCGTCCTTGACGATCC
GCACAAAGGCGTTCAAAACACCCGTGTAGTTTCGCCTCTCCGCCGGCGGC
AATCGGTTATCGGACATCATCCGGATGAGGGCCACCTCCGCCGGATTGCC
GAACATGGCACCGAAAGCACCGGCCAGAATGCCCATACCCATGCTGGCCA
ACACAGTGGGCGGTGCATTGAACTGCTTGCGATAGGCGTCGATCTCCATT
TGGTAGAAACCCATTCGGGCTGTCGTGTACGTGGCCTGTCGCATCAATCC
CGCACTCAATCCATTATACAACGCAAGTATGCCCTCGTTTTT

BS14767.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG7514-PA 906 CG7514-RA 181..906 742..17 3405 98.7 Minus
CG18418-PA 936 CG18418-RA 388..431 547..504 170 95.4 Minus
CG18418-PA 936 CG18418-RA 677..717 261..221 155 95.1 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:20:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG7514-RA 1188 CG7514-RA 254..979 742..17 3495 98.8 Minus
CG18418-RA 1142 CG18418-RA 277..798 739..221 580 74.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:20:01
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4687796..4688521 17..742 3495 98.8 Plus
3L 28110227 3L 4689412..4689794 357..739 535 76 Plus
3L 28110227 3L 4689273..4689347 221..295 195 84 Plus
Blast to na_te.dros performed on 2015-01-31 10:20:04 has no hits.

BS14767.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:13 Download gff for BS14767.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7514-PA 181..906 17..742 98   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:36:56 Download gff for BS14767.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7514-RA 254..983 10..742 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:45:58 Download gff for BS14767.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7514-RA 254..983 10..742 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:45:58 Download gff for BS14767.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 4687791..4688521 10..742 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:36:56 Download gff for BS14767.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4687791..4688521 10..742 98   Plus

BS14767.5prime Sequence

765 bp (758 high quality bases) assembled on 2006-10-13

> BS14767.5prime
GAAGTTATCAGTCGACATGGCGTACAGCATCGAAAAGAAATCCATACCCG
GCTACATGATGTACATCAATGGCGGTCTGGCCGGAATGCTGGGCACCTGC
ATTGTGCAGCCATTGGATTTGGTGAAGACCAGGATGCAGATATCAGCCAC
GACGGGCGAGTACAAGAGCTCCTTCGATTGCCTGCTAAAGGTTTTTAAAA
ACGAGGGCATACTTGCGTTGTATAATGGATTGAGTGCGGGATTGATGCGA
CAGGCCACGTACACGACAGCCCGAATGGGTTTCTACCAAATGGAGATCGA
CGCCTATCGCAAGCAGTTCAATGCACCGCCCACTGTGTTGGCCAGCATGG
GTATGGGCATTCTGGCCGGTGCTTTCGGTGCCATGTTCGGCAATCCGGCG
GAGGTGGCCCTCATCCGGATGATGTCCGATAACCGATTGCCGCCGGCGGA
GAGGCGAAACTACACGGGTGTTTTGAACGCCTTTGTGCGGATCGTCAAGG
ACGAGGGCGTGATCACCCTCTGGAAAGGATGCATGCCCACTGTGGGTCGG
GCCATGATCGTCAACATGGTTCAGCTGGCCTCGTACTCGCAGTTAAAGGC
AGCATTTTCGGAATACTTTTCGGGACTTTCGCTTCACATCGCTGCCGCCA
TGATGTCCGGTCTATTGACCACCATTGCCTCAATGCCACTGGACATGGCC
AAAACGCGCATCCAGCAGCAAAAGACGGCCGAGTACAAGGGCACCATGGA
TGTCCTGATGAAGGT

BS14767.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG7514-PA 906 CG7514-RA 1..749 17..765 3520 98.7 Plus
CG18418-PA 936 CG18418-RA 388..431 392..435 170 95.4 Plus
CG18418-PA 936 CG18418-RA 677..717 678..718 155 95.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:47:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG7514-RA 1188 CG7514-RA 73..822 16..765 3615 98.8 Plus
CG18418-RA 1142 CG18418-RA 152..798 81..718 675 74.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:47:22
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4687953..4688702 765..16 3615 98.8 Minus
3L 28110227 3L 4689412..4689919 582..81 600 75 Minus
3L 28110227 3L 4689273..4689347 718..644 195 84 Minus
Blast to na_te.dros performed on 2015-02-10 21:47:25 has no hits.

BS14767.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:14 Download gff for BS14767.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7514-PA 1..749 17..765 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:08:02 Download gff for BS14767.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7514-RA 62..822 5..765 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:46:23 Download gff for BS14767.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7514-RA 62..822 5..765 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:46:23 Download gff for BS14767.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 4687953..4688713 5..765 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:08:02 Download gff for BS14767.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4687953..4688713 5..765 98   Minus

BS14767.complete Sequence

938 bp assembled on 2006-11-01

GenBank Submission: FJ637780

> BS14767.complete
GAAGTTATCAGTCGACATGGCGTACAGCATCGAAAAGAAATCCATACCCG
GCTACATGATGTACATCAATGGCGGTCTGGCCGGAATGCTGGGCACCTGC
ATTGTGCAGCCATTGGATTTGGTGAAGACCAGGATGCAGATATCAGCCAC
GACGGGCGAGTACAAGAGCTCCTTCGATTGCCTGCTAAAGGTTTTTAAAA
ACGAGGGCATACTTGCGTTGTATAATGGATTGAGTGCGGGATTGATGCGA
CAGGCCACGTACACGACAGCCCGAATGGGTTTCTACCAAATGGAGATCGA
CGCCTATCGCAAGCAGTTCAATGCACCGCCCACTGTGTTGGCCAGCATGG
GTATGGGCATTCTGGCCGGTGCTTTCGGTGCCATGTTCGGCAATCCGGCG
GAGGTGGCCCTCATCCGGATGATGTCCGATAACCGATTGCCGCCGGCGGA
GAGGCGAAACTACACGGGTGTTTTGAACGCCTTTGTGCGGATCGTCAAGG
ACGAGGGCGTGATCACCCTCTGGAAAGGATGCATGCCCACTGTGGGTCGG
GCCATGATCGTCAACATGGTTCAGCTGGCCTCGTACTCGCAGTTAAAGGC
AGCATTTTCGGAATACTTTTCGGGACTTTCGCTTCACATCGCTGCCGCCA
TGATGTCCGGTCTATTGACCACCATTGCCTCAATGCCACTGGACATGGCC
AAAACGCGCATCCAGCAGCAAAAGACGGCCGAGTACAAGGGCACCATGGA
TGTCCTGATGAAGGTCTCCAAGAATGAGGGTATCGCCTCCCTATGGAAGG
GCTTCACGCCCTATTTGTGTCGCTTAGGACCGCACACGGTGTTTGCCTTT
ATATTCCTGGAACAACTCACCAAGGCCTACAAGCACATTGTGCTCGGCGA
CGATTCTGAATCGAACATCTAAAAGCTTTCTAGACCAT

BS14767.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:42:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG7514-RA 906 CG7514-PA 1..906 17..922 4365 98.8 Plus
CG18418-RA 936 CG18418-PA 71..578 81..582 600 75 Plus
CG18418-RA 936 CG18418-PA 631..717 632..718 195 81.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:42:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG7514-RA 1188 CG7514-RA 73..979 16..922 4370 98.8 Plus
CG18418-RA 1142 CG18418-RA 152..659 81..582 600 75 Plus
CG18418-RA 1142 CG18418-RA 712..798 632..718 195 81.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:42:54
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4687796..4688702 922..16 4370 98.8 Minus
3L 28110227 3L 4689412..4689919 582..81 600 75 Minus
3L 28110227 3L 4689273..4689347 718..644 195 84 Minus
Blast to na_te.dros performed on 2014-11-27 14:42:56 has no hits.

BS14767.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:35:15 Download gff for BS14767.complete
Subject Subject Range Query Range Percent Splice Strand
CG7514-RA 1..906 17..922 98   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:08:06 Download gff for BS14767.complete
Subject Subject Range Query Range Percent Splice Strand
CG7514-RA 62..983 5..929 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:31:59 Download gff for BS14767.complete
Subject Subject Range Query Range Percent Splice Strand
CG7514-RA 74..977 17..920 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:35:15 Download gff for BS14767.complete
Subject Subject Range Query Range Percent Splice Strand
CG7514-RA 62..983 5..929 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:51:15 Download gff for BS14767.complete
Subject Subject Range Query Range Percent Splice Strand
CG7514-RA 74..977 17..920 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:51:15 Download gff for BS14767.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4687798..4688701 17..920 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:31:59 Download gff for BS14767.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4687798..4688701 17..920 98   Minus

BS14767.pep Sequence

Translation from 16 to 921

> BS14767.pep
MAYSIEKKSIPGYMMYINGGLAGMLGTCIVQPLDLVKTRMQISATTGEYK
SSFDCLLKVFKNEGILALYNGLSAGLMRQATYTTARMGFYQMEIDAYRKQ
FNAPPTVLASMGMGILAGAFGAMFGNPAEVALIRMMSDNRLPPAERRNYT
GVLNAFVRIVKDEGVITLWKGCMPTVGRAMIVNMVQLASYSQLKAAFSEY
FSGLSLHIAAAMMSGLLTTIASMPLDMAKTRIQQQKTAEYKGTMDVLMKV
SKNEGIASLWKGFTPYLCRLGPHTVFAFIFLEQLTKAYKHIVLGDDSESN
I*

BS14767.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:10:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG7514-PA 301 CG7514-PA 1..301 1..301 1537 100 Plus
CG18418-PA 311 CG18418-PA 3..310 1..301 1046 65.9 Plus
CG1907-PA 317 CG1907-PA 21..317 16..301 841 56.2 Plus
Dic1-PC 280 CG8790-PC 9..272 15..284 425 34.8 Plus
Dic1-PA 280 CG8790-PA 9..272 15..284 425 34.8 Plus