Clone Sequence Records
BS14767.3prime Sequence
742 bp (740 high quality bases) assembled on 2006-10-13
> BS14767.3prime
ATGGTCTAGAAAGCTTTTAGATGTTCGATTCAGAATCGTCGCCGAGCACA
ATGTGCTTGTAGGCCTTGGTGAGTTGTTCCAGGAATATAAAGGCAAACAC
CGTGTGCGGTCCTAAGCGACACAAATAGGGCGTGAAGCCCTTCCATAGGG
AGGCGATACCCTCATTCTTGGAGACCTTCATCAGGACATCCATGGTGCCC
TTGTACTCGGCCGTCTTTTGCTGCTGGATGCGCGTTTTGGCCATGTCCAG
TGGCATTGAGGCAATGGTGGTCAATAGACCGGACATCATGGCGGCAGCGA
TGTGAAGCGAAAGTCCCGAAAAGTATTCCGAAAATGCTGCCTTTAACTGC
GAGTACGAGGCCAGCTGAACCATGTTGACGATCATGGCCCGACCCACAGT
GGGCATGCATCCTTTCCAGAGGGTGATCACGCCCTCGTCCTTGACGATCC
GCACAAAGGCGTTCAAAACACCCGTGTAGTTTCGCCTCTCCGCCGGCGGC
AATCGGTTATCGGACATCATCCGGATGAGGGCCACCTCCGCCGGATTGCC
GAACATGGCACCGAAAGCACCGGCCAGAATGCCCATACCCATGCTGGCCA
ACACAGTGGGCGGTGCATTGAACTGCTTGCGATAGGCGTCGATCTCCATT
TGGTAGAAACCCATTCGGGCTGTCGTGTACGTGGCCTGTCGCATCAATCC
CGCACTCAATCCATTATACAACGCAAGTATGCCCTCGTTTTT
BS14767.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7514-PA | 906 | CG7514-RA | 181..906 | 742..17 | 3405 | 98.7 | Minus |
CG18418-PA | 936 | CG18418-RA | 388..431 | 547..504 | 170 | 95.4 | Minus |
CG18418-PA | 936 | CG18418-RA | 677..717 | 261..221 | 155 | 95.1 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:20:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7514-RA | 1188 | CG7514-RA | 254..979 | 742..17 | 3495 | 98.8 | Minus |
CG18418-RA | 1142 | CG18418-RA | 277..798 | 739..221 | 580 | 74.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:20:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4687796..4688521 | 17..742 | 3495 | 98.8 | Plus |
3L | 28110227 | 3L | 4689412..4689794 | 357..739 | 535 | 76 | Plus |
3L | 28110227 | 3L | 4689273..4689347 | 221..295 | 195 | 84 | Plus |
Blast to na_te.dros performed on 2015-01-31 10:20:04 has no hits.
BS14767.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:13 Download gff for
BS14767.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7514-PA | 181..906 | 17..742 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:36:56 Download gff for
BS14767.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7514-RA | 254..983 | 10..742 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:45:58 Download gff for
BS14767.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7514-RA | 254..983 | 10..742 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:45:58 Download gff for
BS14767.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4687791..4688521 | 10..742 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:36:56 Download gff for
BS14767.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4687791..4688521 | 10..742 | 98 | | Plus |
BS14767.5prime Sequence
765 bp (758 high quality bases) assembled on 2006-10-13
> BS14767.5prime
GAAGTTATCAGTCGACATGGCGTACAGCATCGAAAAGAAATCCATACCCG
GCTACATGATGTACATCAATGGCGGTCTGGCCGGAATGCTGGGCACCTGC
ATTGTGCAGCCATTGGATTTGGTGAAGACCAGGATGCAGATATCAGCCAC
GACGGGCGAGTACAAGAGCTCCTTCGATTGCCTGCTAAAGGTTTTTAAAA
ACGAGGGCATACTTGCGTTGTATAATGGATTGAGTGCGGGATTGATGCGA
CAGGCCACGTACACGACAGCCCGAATGGGTTTCTACCAAATGGAGATCGA
CGCCTATCGCAAGCAGTTCAATGCACCGCCCACTGTGTTGGCCAGCATGG
GTATGGGCATTCTGGCCGGTGCTTTCGGTGCCATGTTCGGCAATCCGGCG
GAGGTGGCCCTCATCCGGATGATGTCCGATAACCGATTGCCGCCGGCGGA
GAGGCGAAACTACACGGGTGTTTTGAACGCCTTTGTGCGGATCGTCAAGG
ACGAGGGCGTGATCACCCTCTGGAAAGGATGCATGCCCACTGTGGGTCGG
GCCATGATCGTCAACATGGTTCAGCTGGCCTCGTACTCGCAGTTAAAGGC
AGCATTTTCGGAATACTTTTCGGGACTTTCGCTTCACATCGCTGCCGCCA
TGATGTCCGGTCTATTGACCACCATTGCCTCAATGCCACTGGACATGGCC
AAAACGCGCATCCAGCAGCAAAAGACGGCCGAGTACAAGGGCACCATGGA
TGTCCTGATGAAGGT
BS14767.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7514-PA | 906 | CG7514-RA | 1..749 | 17..765 | 3520 | 98.7 | Plus |
CG18418-PA | 936 | CG18418-RA | 388..431 | 392..435 | 170 | 95.4 | Plus |
CG18418-PA | 936 | CG18418-RA | 677..717 | 678..718 | 155 | 95.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:47:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7514-RA | 1188 | CG7514-RA | 73..822 | 16..765 | 3615 | 98.8 | Plus |
CG18418-RA | 1142 | CG18418-RA | 152..798 | 81..718 | 675 | 74.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:47:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4687953..4688702 | 765..16 | 3615 | 98.8 | Minus |
3L | 28110227 | 3L | 4689412..4689919 | 582..81 | 600 | 75 | Minus |
3L | 28110227 | 3L | 4689273..4689347 | 718..644 | 195 | 84 | Minus |
Blast to na_te.dros performed on 2015-02-10 21:47:25 has no hits.
BS14767.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:14 Download gff for
BS14767.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7514-PA | 1..749 | 17..765 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:08:02 Download gff for
BS14767.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7514-RA | 62..822 | 5..765 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:46:23 Download gff for
BS14767.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7514-RA | 62..822 | 5..765 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:46:23 Download gff for
BS14767.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4687953..4688713 | 5..765 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:08:02 Download gff for
BS14767.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4687953..4688713 | 5..765 | 98 | | Minus |
BS14767.complete Sequence
938 bp assembled on 2006-11-01
GenBank Submission: FJ637780
> BS14767.complete
GAAGTTATCAGTCGACATGGCGTACAGCATCGAAAAGAAATCCATACCCG
GCTACATGATGTACATCAATGGCGGTCTGGCCGGAATGCTGGGCACCTGC
ATTGTGCAGCCATTGGATTTGGTGAAGACCAGGATGCAGATATCAGCCAC
GACGGGCGAGTACAAGAGCTCCTTCGATTGCCTGCTAAAGGTTTTTAAAA
ACGAGGGCATACTTGCGTTGTATAATGGATTGAGTGCGGGATTGATGCGA
CAGGCCACGTACACGACAGCCCGAATGGGTTTCTACCAAATGGAGATCGA
CGCCTATCGCAAGCAGTTCAATGCACCGCCCACTGTGTTGGCCAGCATGG
GTATGGGCATTCTGGCCGGTGCTTTCGGTGCCATGTTCGGCAATCCGGCG
GAGGTGGCCCTCATCCGGATGATGTCCGATAACCGATTGCCGCCGGCGGA
GAGGCGAAACTACACGGGTGTTTTGAACGCCTTTGTGCGGATCGTCAAGG
ACGAGGGCGTGATCACCCTCTGGAAAGGATGCATGCCCACTGTGGGTCGG
GCCATGATCGTCAACATGGTTCAGCTGGCCTCGTACTCGCAGTTAAAGGC
AGCATTTTCGGAATACTTTTCGGGACTTTCGCTTCACATCGCTGCCGCCA
TGATGTCCGGTCTATTGACCACCATTGCCTCAATGCCACTGGACATGGCC
AAAACGCGCATCCAGCAGCAAAAGACGGCCGAGTACAAGGGCACCATGGA
TGTCCTGATGAAGGTCTCCAAGAATGAGGGTATCGCCTCCCTATGGAAGG
GCTTCACGCCCTATTTGTGTCGCTTAGGACCGCACACGGTGTTTGCCTTT
ATATTCCTGGAACAACTCACCAAGGCCTACAAGCACATTGTGCTCGGCGA
CGATTCTGAATCGAACATCTAAAAGCTTTCTAGACCAT
BS14767.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:42:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7514-RA | 906 | CG7514-PA | 1..906 | 17..922 | 4365 | 98.8 | Plus |
CG18418-RA | 936 | CG18418-PA | 71..578 | 81..582 | 600 | 75 | Plus |
CG18418-RA | 936 | CG18418-PA | 631..717 | 632..718 | 195 | 81.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:42:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7514-RA | 1188 | CG7514-RA | 73..979 | 16..922 | 4370 | 98.8 | Plus |
CG18418-RA | 1142 | CG18418-RA | 152..659 | 81..582 | 600 | 75 | Plus |
CG18418-RA | 1142 | CG18418-RA | 712..798 | 632..718 | 195 | 81.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:42:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4687796..4688702 | 922..16 | 4370 | 98.8 | Minus |
3L | 28110227 | 3L | 4689412..4689919 | 582..81 | 600 | 75 | Minus |
3L | 28110227 | 3L | 4689273..4689347 | 718..644 | 195 | 84 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:42:56 has no hits.
BS14767.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:35:15 Download gff for
BS14767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7514-RA | 1..906 | 17..922 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:08:06 Download gff for
BS14767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7514-RA | 62..983 | 5..929 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:31:59 Download gff for
BS14767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7514-RA | 74..977 | 17..920 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:35:15 Download gff for
BS14767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7514-RA | 62..983 | 5..929 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:51:15 Download gff for
BS14767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7514-RA | 74..977 | 17..920 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:51:15 Download gff for
BS14767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4687798..4688701 | 17..920 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:31:59 Download gff for
BS14767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4687798..4688701 | 17..920 | 98 | | Minus |
BS14767.pep Sequence
Translation from 16 to 921
> BS14767.pep
MAYSIEKKSIPGYMMYINGGLAGMLGTCIVQPLDLVKTRMQISATTGEYK
SSFDCLLKVFKNEGILALYNGLSAGLMRQATYTTARMGFYQMEIDAYRKQ
FNAPPTVLASMGMGILAGAFGAMFGNPAEVALIRMMSDNRLPPAERRNYT
GVLNAFVRIVKDEGVITLWKGCMPTVGRAMIVNMVQLASYSQLKAAFSEY
FSGLSLHIAAAMMSGLLTTIASMPLDMAKTRIQQQKTAEYKGTMDVLMKV
SKNEGIASLWKGFTPYLCRLGPHTVFAFIFLEQLTKAYKHIVLGDDSESN
I*
BS14767.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:10:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7514-PA | 301 | CG7514-PA | 1..301 | 1..301 | 1537 | 100 | Plus |
CG18418-PA | 311 | CG18418-PA | 3..310 | 1..301 | 1046 | 65.9 | Plus |
CG1907-PA | 317 | CG1907-PA | 21..317 | 16..301 | 841 | 56.2 | Plus |
Dic1-PC | 280 | CG8790-PC | 9..272 | 15..284 | 425 | 34.8 | Plus |
Dic1-PA | 280 | CG8790-PA | 9..272 | 15..284 | 425 | 34.8 | Plus |