Clone BS14771 Report

Search the DGRC for BS14771

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:147
Well:71
Vector:pDNR-Dual
Associated Gene/TranscriptCG15330-RA
Protein status:BS14771.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14771.3prime Sequence

576 bp (576 high quality bases) assembled on 2006-10-13

> BS14771.3prime
ATGGTCTAGAAAGCTTTCAAATACGATTGCCTGCAGGCAGCAGCAGCTCA
TCCAGTAGCTCGGCCACAAATCGTGCATCCACCACAAGATTTGGTTCCGG
CTGGCCGTGTGGTGGCCAGTGGTCCGTCTCATGGTAGTGGACCGGATAGA
AATAGACATACTCTTCGATATGCTGGCGGGGCTGAGAGGACATGGGACTG
TGGAGCTGCACATGCCGTCGTCCAGGTGGACGATGCATTTGCAGCTGTTG
ACCCACGACAAGTAGATCCAAGGTGTTATTATTGGATGCTTTGAATTTAA
CCGATTTATTCGGATGATTGCGTCTGATCTGCGTTGTCTGCTTCCTGGCC
ATTGGCAACGGCATCGGCGTCTGCTGACCACCACCGCTCATCCGTTGGCC
AGGATGGGCGACGAACGGTGGCTGCAGGAGCGGATCGTGGATGAGCAAGT
CGCTGGACCTCTTGCCCGTCAGCCGCTTGAGGCGTCTACCAATCCTGTCC
CACTCGTTAAGTTGCCGCTGATGCGCCTGCTGCAAGCGCCAAAGTGTTGT
TGCAACGTCCATGTCGACTGATAACT

BS14771.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG15330-PA 546 CG15330-RA 1..546 562..17 2730 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:52:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG15330-RA 639 CG15330-RA 59..604 562..17 2730 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:52:53
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7956122..7956667 562..17 2730 100 Minus
Blast to na_te.dros performed on 2015-02-12 17:52:55 has no hits.

BS14771.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:16 Download gff for BS14771.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15330-PA 1..546 17..562 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:44:25 Download gff for BS14771.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15330-RA 51..607 10..571 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:09:38 Download gff for BS14771.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15330-RA 51..607 10..571 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:09:38 Download gff for BS14771.3prime
Subject Subject Range Query Range Percent Splice Strand
X 7956114..7956670 10..571 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:44:25 Download gff for BS14771.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 7850147..7850703 10..571 98   Minus

BS14771.5prime Sequence

576 bp (576 high quality bases) assembled on 2006-10-13

> BS14771.5prime
GAAGTTATCAGTCGACATGGACGTTGCAACAACACTTTGGCGCTTGCAGC
AGGCGCATCAGCGGCAACTTAACGAGTGGGACAGGATTGGTAGACGCCTC
AAGCGGCTGACGGGCAAGAGGTCCAGCGACTTGCTCATCCACGATCCGCT
CCTGCAGCCACCGTTCGTCGCCCATCCTGGCCAACGGATGAGCGGTGGTG
GTCAGCAGACGCCGATGCCGTTGCCAATGGCCAGGAAGCAGACAACGCAG
ATCAGACGCAATCATCCGAATAAATCGGTTAAATTCAAAGCATCCAATAA
TAACACCTTGGATCTACTTGTCGTGGGTCAACAGCTGCAAATGCATCGTC
CACCTGGACGACGGCATGTGCAGCTCCACAGTCCCATGTCCTCTCAGCCC
CGCCAGCATATCGAAGAGTATGTCTATTTCTATCCGGTCCACTACCATGA
GACGGACCACTGGCCACCACACGGCCAGCCGGAACCAAATCTTGTGGTGG
ATGCACGATTTGTGGCCGAGCTACTGGATGAGCTGCTGCTGCCTGCAGGC
AATCGTATTTGAAAGCTTTCTAGACC

BS14771.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG15330-PA 546 CG15330-RA 1..546 17..562 2730 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:55:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG15330-RA 639 CG15330-RA 59..604 17..562 2730 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:54:59
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7956122..7956667 17..562 2730 100 Plus
Blast to na_te.dros performed on 2015-02-10 16:55:04 has no hits.

BS14771.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:16 Download gff for BS14771.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15330-PA 1..546 17..562 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 20:16:07 Download gff for BS14771.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15330-RA 51..607 8..569 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:51:25 Download gff for BS14771.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15330-RA 51..607 8..569 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:51:25 Download gff for BS14771.5prime
Subject Subject Range Query Range Percent Splice Strand
X 7956114..7956670 8..569 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 20:16:07 Download gff for BS14771.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 7850147..7850703 8..569 98   Plus

BS14771.complete Sequence

578 bp assembled on 2006-11-01

GenBank Submission: FJ637782

> BS14771.complete
GAAGTTATCAGTCGACATGGACGTTGCAACAACACTTTGGCGCTTGCAGC
AGGCGCATCAGCGGCAACTTAACGAGTGGGACAGGATTGGTAGACGCCTC
AAGCGGCTGACGGGCAAGAGGTCCAGCGACTTGCTCATCCACGATCCGCT
CCTGCAGCCACCGTTCGTCGCCCATCCTGGCCAACGGATGAGCGGTGGTG
GTCAGCAGACGCCGATGCCGTTGCCAATGGCCAGGAAGCAGACAACGCAG
ATCAGACGCAATCATCCGAATAAATCGGTTAAATTCAAAGCATCCAATAA
TAACACCTTGGATCTACTTGTCGTGGGTCAACAGCTGCAAATGCATCGTC
CACCTGGACGACGGCATGTGCAGCTCCACAGTCCCATGTCCTCTCAGCCC
CGCCAGCATATCGAAGAGTATGTCTATTTCTATCCGGTCCACTACCATGA
GACGGACCACTGGCCACCACACGGCCAGCCGGAACCAAATCTTGTGGTGG
ATGCACGATTTGTGGCCGAGCTACTGGATGAGCTGCTGCTGCCTGCAGGC
AATCGTATTTGAAAGCTTTCTAGACCAT

BS14771.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:04:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG15330-RA 546 CG15330-PA 1..546 17..562 2730 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:04:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG15330-RA 639 CG15330-RA 59..604 17..562 2730 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:04:11
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7956122..7956667 17..562 2730 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:04:12 has no hits.

BS14771.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:42:34 Download gff for BS14771.complete
Subject Subject Range Query Range Percent Splice Strand
CG15330-RA 1..546 17..562 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:29:23 Download gff for BS14771.complete
Subject Subject Range Query Range Percent Splice Strand
CG15330-RA 51..607 8..569 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:06:26 Download gff for BS14771.complete
Subject Subject Range Query Range Percent Splice Strand
CG15330-RA 59..603 17..561 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:42:35 Download gff for BS14771.complete
Subject Subject Range Query Range Percent Splice Strand
CG15330-RA 51..607 8..569 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:14:03 Download gff for BS14771.complete
Subject Subject Range Query Range Percent Splice Strand
CG15330-RA 59..603 17..561 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:14:03 Download gff for BS14771.complete
Subject Subject Range Query Range Percent Splice Strand
X 7956122..7956666 17..561 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:06:26 Download gff for BS14771.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 7850155..7850699 17..561 100   Plus

BS14771.pep Sequence

Translation from 16 to 561

> BS14771.pep
MDVATTLWRLQQAHQRQLNEWDRIGRRLKRLTGKRSSDLLIHDPLLQPPF
VAHPGQRMSGGGQQTPMPLPMARKQTTQIRRNHPNKSVKFKASNNNTLDL
LVVGQQLQMHRPPGRRHVQLHSPMSSQPRQHIEEYVYFYPVHYHETDHWP
PHGQPEPNLVVDARFVAELLDELLLPAGNRI*

BS14771.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:46:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG15330-PA 181 CG15330-PA 1..181 1..181 980 100 Plus