Clone Sequence Records
BS14771.3prime Sequence
576 bp (576 high quality bases) assembled on 2006-10-13
> BS14771.3prime
ATGGTCTAGAAAGCTTTCAAATACGATTGCCTGCAGGCAGCAGCAGCTCA
TCCAGTAGCTCGGCCACAAATCGTGCATCCACCACAAGATTTGGTTCCGG
CTGGCCGTGTGGTGGCCAGTGGTCCGTCTCATGGTAGTGGACCGGATAGA
AATAGACATACTCTTCGATATGCTGGCGGGGCTGAGAGGACATGGGACTG
TGGAGCTGCACATGCCGTCGTCCAGGTGGACGATGCATTTGCAGCTGTTG
ACCCACGACAAGTAGATCCAAGGTGTTATTATTGGATGCTTTGAATTTAA
CCGATTTATTCGGATGATTGCGTCTGATCTGCGTTGTCTGCTTCCTGGCC
ATTGGCAACGGCATCGGCGTCTGCTGACCACCACCGCTCATCCGTTGGCC
AGGATGGGCGACGAACGGTGGCTGCAGGAGCGGATCGTGGATGAGCAAGT
CGCTGGACCTCTTGCCCGTCAGCCGCTTGAGGCGTCTACCAATCCTGTCC
CACTCGTTAAGTTGCCGCTGATGCGCCTGCTGCAAGCGCCAAAGTGTTGT
TGCAACGTCCATGTCGACTGATAACT
BS14771.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15330-PA | 546 | CG15330-RA | 1..546 | 562..17 | 2730 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:52:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15330-RA | 639 | CG15330-RA | 59..604 | 562..17 | 2730 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:52:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 7956122..7956667 | 562..17 | 2730 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 17:52:55 has no hits.
BS14771.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:16 Download gff for
BS14771.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15330-PA | 1..546 | 17..562 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:44:25 Download gff for
BS14771.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15330-RA | 51..607 | 10..571 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:09:38 Download gff for
BS14771.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15330-RA | 51..607 | 10..571 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:09:38 Download gff for
BS14771.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 7956114..7956670 | 10..571 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:44:25 Download gff for
BS14771.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 7850147..7850703 | 10..571 | 98 | | Minus |
BS14771.5prime Sequence
576 bp (576 high quality bases) assembled on 2006-10-13
> BS14771.5prime
GAAGTTATCAGTCGACATGGACGTTGCAACAACACTTTGGCGCTTGCAGC
AGGCGCATCAGCGGCAACTTAACGAGTGGGACAGGATTGGTAGACGCCTC
AAGCGGCTGACGGGCAAGAGGTCCAGCGACTTGCTCATCCACGATCCGCT
CCTGCAGCCACCGTTCGTCGCCCATCCTGGCCAACGGATGAGCGGTGGTG
GTCAGCAGACGCCGATGCCGTTGCCAATGGCCAGGAAGCAGACAACGCAG
ATCAGACGCAATCATCCGAATAAATCGGTTAAATTCAAAGCATCCAATAA
TAACACCTTGGATCTACTTGTCGTGGGTCAACAGCTGCAAATGCATCGTC
CACCTGGACGACGGCATGTGCAGCTCCACAGTCCCATGTCCTCTCAGCCC
CGCCAGCATATCGAAGAGTATGTCTATTTCTATCCGGTCCACTACCATGA
GACGGACCACTGGCCACCACACGGCCAGCCGGAACCAAATCTTGTGGTGG
ATGCACGATTTGTGGCCGAGCTACTGGATGAGCTGCTGCTGCCTGCAGGC
AATCGTATTTGAAAGCTTTCTAGACC
BS14771.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:52:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15330-PA | 546 | CG15330-RA | 1..546 | 17..562 | 2730 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:55:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15330-RA | 639 | CG15330-RA | 59..604 | 17..562 | 2730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:54:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 7956122..7956667 | 17..562 | 2730 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 16:55:04 has no hits.
BS14771.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:16 Download gff for
BS14771.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15330-PA | 1..546 | 17..562 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 20:16:07 Download gff for
BS14771.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15330-RA | 51..607 | 8..569 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:51:25 Download gff for
BS14771.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15330-RA | 51..607 | 8..569 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:51:25 Download gff for
BS14771.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 7956114..7956670 | 8..569 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 20:16:07 Download gff for
BS14771.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 7850147..7850703 | 8..569 | 98 | | Plus |
BS14771.complete Sequence
578 bp assembled on 2006-11-01
GenBank Submission: FJ637782
> BS14771.complete
GAAGTTATCAGTCGACATGGACGTTGCAACAACACTTTGGCGCTTGCAGC
AGGCGCATCAGCGGCAACTTAACGAGTGGGACAGGATTGGTAGACGCCTC
AAGCGGCTGACGGGCAAGAGGTCCAGCGACTTGCTCATCCACGATCCGCT
CCTGCAGCCACCGTTCGTCGCCCATCCTGGCCAACGGATGAGCGGTGGTG
GTCAGCAGACGCCGATGCCGTTGCCAATGGCCAGGAAGCAGACAACGCAG
ATCAGACGCAATCATCCGAATAAATCGGTTAAATTCAAAGCATCCAATAA
TAACACCTTGGATCTACTTGTCGTGGGTCAACAGCTGCAAATGCATCGTC
CACCTGGACGACGGCATGTGCAGCTCCACAGTCCCATGTCCTCTCAGCCC
CGCCAGCATATCGAAGAGTATGTCTATTTCTATCCGGTCCACTACCATGA
GACGGACCACTGGCCACCACACGGCCAGCCGGAACCAAATCTTGTGGTGG
ATGCACGATTTGTGGCCGAGCTACTGGATGAGCTGCTGCTGCCTGCAGGC
AATCGTATTTGAAAGCTTTCTAGACCAT
BS14771.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:04:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15330-RA | 546 | CG15330-PA | 1..546 | 17..562 | 2730 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:04:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15330-RA | 639 | CG15330-RA | 59..604 | 17..562 | 2730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:04:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 7956122..7956667 | 17..562 | 2730 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:04:12 has no hits.
BS14771.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:42:34 Download gff for
BS14771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15330-RA | 1..546 | 17..562 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:29:23 Download gff for
BS14771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15330-RA | 51..607 | 8..569 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:06:26 Download gff for
BS14771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15330-RA | 59..603 | 17..561 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:42:35 Download gff for
BS14771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15330-RA | 51..607 | 8..569 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:14:03 Download gff for
BS14771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15330-RA | 59..603 | 17..561 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:14:03 Download gff for
BS14771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 7956122..7956666 | 17..561 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:06:26 Download gff for
BS14771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 7850155..7850699 | 17..561 | 100 | | Plus |
BS14771.pep Sequence
Translation from 16 to 561
> BS14771.pep
MDVATTLWRLQQAHQRQLNEWDRIGRRLKRLTGKRSSDLLIHDPLLQPPF
VAHPGQRMSGGGQQTPMPLPMARKQTTQIRRNHPNKSVKFKASNNNTLDL
LVVGQQLQMHRPPGRRHVQLHSPMSSQPRQHIEEYVYFYPVHYHETDHWP
PHGQPEPNLVVDARFVAELLDELLLPAGNRI*
BS14771.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:46:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15330-PA | 181 | CG15330-PA | 1..181 | 1..181 | 980 | 100 | Plus |