Clone BS14785 Report

Search the DGRC for BS14785

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:147
Well:85
Vector:pDNR-Dual
Associated Gene/TranscriptCG15395-RB
Protein status:BS14785.pep: gold
Sequenced Size:869

Clone Sequence Records

BS14785.5prime Sequence

721 bp (675 high quality bases) assembled on 2006-10-13

> BS14785.5prime
GAAGTTATCAGTCGACATGATAATAATGTCTGATTCGAAAGCGGAGTACA
ACTGGGGCGATTTGGGTGTGGAGTCGATGGAGAGCTTTGCATCCGCAATA
AGTGAGGAGTTTCCCAGACTCCAACAGCATCGTGAGCAGGTGGAGCAGCT
GCAGCGACGCGGCAGGCAGATTGTCAGCCAGGCCCAGCAGCATTCTCAGG
TTTTGGTCTCCAATCTGTTCAAGAATATGAAGATCTCGTGCGAGAAGCCC
ACATTTCCACCGCAGGTGTCGGCTCCAAAGGCCTATCGCTTCAAGGACAT
CTATTCCAGTCGCAAGGATCAGCTGATCCGCGAATGCAGGGAGCAGGAGC
GCAAGCAGCGCGAGTTCCACAGCCGACCGATGCCCGACTTTCGTCAGGCG
CACTCACGTCAGTCCTCCAGGGTCGTTGTGCATCGGATCACCTGCCCCAC
GACCCCCAATGTGCTCAAGAATTCGCGTGAAATGGAGGAAAAGCGCCGCT
TGCGGGTGGAGCAGCTGCAGAGGGAGCGCGAGCTGGAGTCCCAACTTCAC
AAAATGCAGGCTCCTAGGGCCAAACCGATTCCGCAGAGCAGCCGTCAGCC
CTTGAAGTCCTCGAACCGACCTTCCTCCGCAGTTCCAGCGGCAAGGGTGA
AGGTCGAGCCCTTCAACTTGTCCGCCGAATCGCGCGTCCAGCATCGGCGC
ATTTTCAACATCCAGACGTCC

BS14785.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:12:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG15395-PA 837 CG15395-RA 1..705 17..721 3500 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:53:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG15395-RB 1234 CG15395-RB 165..869 17..721 3510 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:53:29
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2610476..2610918 279..721 2200 99.8 Plus
2L 23513712 2L 2610158..2610422 17..281 1325 100 Plus
Blast to na_te.dros performed on 2015-02-13 15:53:30 has no hits.

BS14785.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:26 Download gff for BS14785.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15395-PA 1..705 17..721 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 12:54:39 Download gff for BS14785.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 154..869 7..721 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:28:53 Download gff for BS14785.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 154..869 7..721 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:28:53 Download gff for BS14785.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 2610147..2610421 7..280 98 -> Plus
2L 2610478..2610918 281..721 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 12:54:39 Download gff for BS14785.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2610147..2610421 7..280 98 -> Plus
arm_2L 2610478..2610918 281..721 99   Plus

BS14785.complete Sequence

869 bp assembled on 2012-04-25

GenBank Submission: KX804367

> BS14785.complete
GAAGTTATCAGTCGACATGATAATAATGTCTGATTCGAAAGCGGAGTACA
ACTGGGGCGATTTGGGTGTGGAGTCGATGGAGAGCTTTGCATCCGCAATA
AGTGAGGAGTTTCCCAGACTCCAACAGCATCGTGAGCAGGTGGAGCAGCT
GCAGCGACGCGGCAGGCAGATTGTCAGCCAGGCCCAGCAGCATTCTCAGG
TTTTGGTCTCCAATCTGTTCAAGAATATGAAGATCTCGTGCGAGAAGCCC
ACATTTCCACCGCAGGTGTCGGCTCCAAAGGCCTATCGCTTCAAGGACAT
CTATTCCAGTCGCAAGGATCAGCTGATCCGCGAATGCAGGGAGCAGGAGC
GCAAGCAGCGCGAGTTCCACAGCCGACCGATGCCCGACTTTCGTCAGGCG
CACTCACGTCAGTCCTCCAGGGTCGTTGTGCATCGGATCACCTGCCCCAC
GACCCCCAATGTGCTCAAGAATTCGCGTGAAATGGAGGAAAAGCGCCGCT
TGCGGGTGGAGCAGCTGCAGAGGGAGCGCGAGCTGGAGTCCCAACTTCAC
AAAATGCAGGCTCCTAGGGCCAAACCGATTCCGCAGAGCAGCCGTCAGCC
CTTGAAGTCCTCGAACCGACCTTCCTCCGCAGTTCCAGCGGCAAGGGTGA
AGGTCGAGCCCTTCAACTTGTCCGCCGAATCGCGCGTCCAGCAGCGGCGC
ATTTTCAACATCCAGACGTCCAAGGCGCAGGAGGCGCGGCGCCGCGAGCT
GGAGGATCAGCGCCAACGGGCGGAACGGGAGGCCTACCAAAAGCTGCGCC
AACGAACCACGTTCCGCGCCAGACCCAATCCATTTTCGCAGACCGCACGT
TGAAAGCTTTCTAGACCAT

BS14785.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:13:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG15395-RB 828 CG15395-PB 1..828 26..853 4140 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:13:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG15395-RB 1234 CG15395-RB 165..1001 17..853 4185 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:13:52
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2610476..2611050 279..853 2875 100 Plus
2L 23513712 2L 2610158..2610422 17..281 1325 100 Plus
Blast to na_te.dros performed on 2014-11-28 12:13:53 has no hits.

BS14785.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:45:13 Download gff for BS14785.complete
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 1..852 7..858 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 15:17:39 Download gff for BS14785.complete
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 13..848 17..852 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:16 Download gff for BS14785.complete
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 165..1000 17..852 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:16:01 Download gff for BS14785.complete
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 13..848 17..852 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:00:05 Download gff for BS14785.complete
Subject Subject Range Query Range Percent Splice Strand
CG15395-RB 165..1000 17..852 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:00:05 Download gff for BS14785.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2610158..2610421 17..280 100 -> Plus
2L 2610478..2611049 281..852 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:16 Download gff for BS14785.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2610158..2610421 17..280 100 -> Plus
arm_2L 2610478..2611049 281..852 100   Plus

BS14785.pep Sequence

Translation from 16 to 852

> BS14785.pep
MIIMSDSKAEYNWGDLGVESMESFASAISEEFPRLQQHREQVEQLQRRGR
QIVSQAQQHSQVLVSNLFKNMKISCEKPTFPPQVSAPKAYRFKDIYSSRK
DQLIRECREQERKQREFHSRPMPDFRQAHSRQSSRVVVHRITCPTTPNVL
KNSREMEEKRRLRVEQLQRERELESQLHKMQAPRAKPIPQSSRQPLKSSN
RPSSAVPAARVKVEPFNLSAESRVQQRRIFNIQTSKAQEARRRELEDQRQ
RAEREAYQKLRQRTTFRARPNPFSQTAR*

BS14785.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:21:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG15395-PB 275 CG15395-PB 1..275 4..278 1397 100 Plus
mei-38-PA 325 CG14781-PA 193..319 85..246 240 33.3 Plus
mei-38-PB 326 CG14781-PB 194..320 85..246 240 33.3 Plus
CG5781-PA 266 CG5781-PA 74..255 87..276 175 26.9 Plus