Clone BS14802 Report

Search the DGRC for BS14802

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:148
Well:2
Vector:pDNR-Dual
Associated Gene/TranscriptCG11400-RA
Protein status:BS14802.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14802.3prime Sequence

627 bp (627 high quality bases) assembled on 2006-10-13

> BS14802.3prime
ATGGTCTAGAAAGCTTCTAGGCAATTTTTCGGCAATGATCATTTACGGTC
AGAGTAGTGCCCTGTGGACAAATTCGCGTTGTTTCCAGGACAATCCTTGG
CCCAATAACCACACTAGTGGCACTGCTAGCATTGGTGGCTTCCGTATGAT
CCCAAGGCGCTGGCTTATCTGAACTAGATTCCTGGCCGAAGGTTATCATC
TTGGACTCGCTGGAAGGATGTGCATGATTTTTCGAAATGCTGGGCACATC
GTTCATTTTAATCTCTTGTGTTGATGAGTTTCCCTGTGGTTCGGTCAAGT
TTTTCGAATCATTGGTAGTATTTGCCGGTGACTCATGCTTGTTGTCGTTA
GCCGTAGTTCTCGGTGTGCCCTTTTTGATTTCTTTGAGGATTGGTAGATT
TACATTTGTGGCTCTAGTCACCTCCGCCATTTCTCGCTCGATTTCCTTAA
GTCTGGATTCCAGTCGGATGGCTGTGGCATTTGGCTTGGACTCCGAGGGA
AACACAAACTGATCGCTGGGCACTCGAGCTGCACGATTTGTATCCAATGA
CAGACACAGCCAGACAAACAAAAACAGCAGCTTCGGCCAGGGAAGCCGCC
GCGTAATTGCCATGTCGACTGATAACT

BS14802.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG11400-PA 597 CG11400-RA 1..597 613..17 2985 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 12:13:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG11400-RB 1217 CG11400-RB 80..677 613..16 2990 100 Minus
CG11400-RA 724 CG11400-RA 80..677 613..16 2990 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 12:13:31
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17134208..17134805 613..16 2990 100 Minus
2R 25286936 2R 17135811..17135935 613..489 505 93.6 Minus
2R 25286936 2R 17135937..17136072 151..16 395 86 Minus
Blast to na_te.dros performed on 2015-02-08 12:13:35 has no hits.

BS14802.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:35 Download gff for BS14802.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11400-PA 1..597 17..613 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:40:56 Download gff for BS14802.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11400-RA 80..679 11..613 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:45:33 Download gff for BS14802.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11400-RA 80..679 11..613 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:45:33 Download gff for BS14802.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 17134208..17134807 11..613 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:40:56 Download gff for BS14802.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13021713..13022312 11..613 99   Minus

BS14802.5prime Sequence

627 bp (627 high quality bases) assembled on 2006-10-13

> BS14802.5prime
GAAGTTATCAGTCGACATGGCAATTACGCGGCGGCTTCCCTGGCCGAAGC
TGCTGTTTTTGTTTGTCTGGCTGTGTCTGTCATTGGATACAAATCGTGCA
GCTCGAGTGCCCAGCGATCAGTTTGTGTTTCCCTCGGAGTCCAAGCCAAA
TGCCACAGCCATCCGACTGGAATCCAGACTTAAGGAAATCGAGCGAGAAA
TGGCGGAGGTGACTAGAGCCACAAATGTAAATCTACCAATCCTCAAAGAA
ATCAAAAAGGGCACACCGAGAACTACGGCTAACGACAACAAGCATGAGTC
ACCGGCAAATACTACCAATGATTCGAAAAACTTGACCGAACCACAGGGAA
ACTCATCAACACAAGAGATTAAAATGAACGATGTGCCCAGCATTTCGAAA
AATCATGCACATCCTTCCAGCGAGTCCAAGATGATAACCTTCGGCCAGGA
ATCTAGTTCAGATAAGCCAGCGCCTTGGGATCATACGGAAGCCACCAATG
CTAGCAGTGCCACTAGTGTGGTTATTGGGCCAAGGATTGTCCTGGAAACA
ACGCGAATTTGTCCACAGGGCACTACTCTGACCGTAAATGATCATTGCCG
AAAAATTGCCTAGAAGCTTTCTAGACC

BS14802.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG11400-PA 597 CG11400-RA 1..597 17..613 2985 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:48:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG11400-RB 1217 CG11400-RB 80..677 17..614 2990 100 Plus
CG11400-RA 724 CG11400-RA 80..677 17..614 2990 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:48:35
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17134208..17134805 17..614 2990 100 Plus
2R 25286936 2R 17135811..17135935 17..141 505 93.6 Plus
2R 25286936 2R 17135937..17136072 479..614 395 86 Plus
Blast to na_te.dros performed on 2015-02-10 21:48:38 has no hits.

BS14802.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:35 Download gff for BS14802.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11400-PA 1..597 17..613 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:08:08 Download gff for BS14802.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11400-RA 80..679 17..619 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:46:32 Download gff for BS14802.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11400-RA 80..679 17..619 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:46:32 Download gff for BS14802.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 17134208..17134807 17..619 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:08:08 Download gff for BS14802.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13021713..13022312 17..619 99   Plus

BS14802.complete Sequence

629 bp assembled on 2006-11-01

GenBank Submission: FJ637788

> BS14802.complete
GAAGTTATCAGTCGACATGGCAATTACGCGGCGGCTTCCCTGGCCGAAGC
TGCTGTTTTTGTTTGTCTGGCTGTGTCTGTCATTGGATACAAATCGTGCA
GCTCGAGTGCCCAGCGATCAGTTTGTGTTTCCCTCGGAGTCCAAGCCAAA
TGCCACAGCCATCCGACTGGAATCCAGACTTAAGGAAATCGAGCGAGAAA
TGGCGGAGGTGACTAGAGCCACAAATGTAAATCTACCAATCCTCAAAGAA
ATCAAAAAGGGCACACCGAGAACTACGGCTAACGACAACAAGCATGAGTC
ACCGGCAAATACTACCAATGATTCGAAAAACTTGACCGAACCACAGGGAA
ACTCATCAACACAAGAGATTAAAATGAACGATGTGCCCAGCATTTCGAAA
AATCATGCACATCCTTCCAGCGAGTCCAAGATGATAACCTTCGGCCAGGA
ATCTAGTTCAGATAAGCCAGCGCCTTGGGATCATACGGAAGCCACCAATG
CTAGCAGTGCCACTAGTGTGGTTATTGGGCCAAGGATTGTCCTGGAAACA
ACGCGAATTTGTCCACAGGGCACTACTCTGACCGTAAATGATCATTGCCG
AAAAATTGCCTAGAAGCTTTCTAGACCAT

BS14802.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:19:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG11400-RB 597 CG11400-PB 1..597 17..613 2985 100 Plus
CG11400-RA 597 CG11400-PA 1..597 17..613 2985 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:19:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG11400-RB 1217 CG11400-RB 80..677 17..614 2990 100 Plus
CG11400-RA 724 CG11400-RA 80..677 17..614 2990 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:19:52
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17134208..17134805 17..614 2990 100 Plus
2R 25286936 2R 17135811..17135935 17..141 505 93.6 Plus
2R 25286936 2R 17135937..17136072 479..614 395 86 Plus
Blast to na_te.dros performed on 2014-11-28 01:19:53 has no hits.

BS14802.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:35:00 Download gff for BS14802.complete
Subject Subject Range Query Range Percent Splice Strand
CG11400-RA 1..597 17..613 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:07:52 Download gff for BS14802.complete
Subject Subject Range Query Range Percent Splice Strand
CG11400-RA 52..651 17..619 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:46:34 Download gff for BS14802.complete
Subject Subject Range Query Range Percent Splice Strand
CG11400-RA 80..676 17..613 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:35:00 Download gff for BS14802.complete
Subject Subject Range Query Range Percent Splice Strand
CG11400-RA 52..651 17..619 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:51:06 Download gff for BS14802.complete
Subject Subject Range Query Range Percent Splice Strand
CG11400-RA 80..676 17..613 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:51:06 Download gff for BS14802.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17134208..17134804 17..613 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:46:34 Download gff for BS14802.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13021713..13022309 17..613 100   Plus

BS14802.pep Sequence

Translation from 16 to 612

> BS14802.pep
MAITRRLPWPKLLFLFVWLCLSLDTNRAARVPSDQFVFPSESKPNATAIR
LESRLKEIEREMAEVTRATNVNLPILKEIKKGTPRTTANDNKHESPANTT
NDSKNLTEPQGNSSTQEIKMNDVPSISKNHAHPSSESKMITFGQESSSDK
PAPWDHTEATNASSATSVVIGPRIVLETTRICPQGTTLTVNDHCRKIA*

BS14802.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:10:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG11400-PB 198 CG11400-PB 1..198 1..198 1026 100 Plus
CG11400-PA 198 CG11400-PA 1..198 1..198 1026 100 Plus