Clone Sequence Records
BS14807.3prime Sequence
417 bp (417 high quality bases) assembled on 2006-10-13
> BS14807.3prime
ATGGTCTAGAAAGCTTCTAGGCTTCGACGGCGGGTTCCATGGACAAGGAC
CTGCTGCTCACACTCCCGGCGGGGGTCATGATGTCCTCCAGCATTTGGTT
GAGCGACTCGGAGCCCAGAGCGTACTCCTGCTTATTGGCACTTCGGTTGT
GCATGGCGTCCAAGTAGACGCCACTCGCATTGCGCTCGCTGCTCAGAATG
TGCTGCATGACATTGCTGATCTGTTCGGAGCCCAGGATCTTCGGTTGCTC
GGTGGCCAGTCCATCGATGACCGCAGTTTCCAGCTGGCTTGAAATTTTGG
CCGGCGACTCCTCCTCGTTGGCAGTTTTTAGAAAACGAATCGCCTGTGCA
GAGGCCAAGGCTCCGGCCGTAAAAGAGGTCAGCAACTGAGCAATCGAAAT
CATGTCGACTGATAACT
BS14807.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17648-PA | 387 | CG17648-RA | 1..387 | 403..17 | 1935 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:54:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17648-RA | 541 | CG17648-RA | 76..471 | 403..7 | 1960 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:54:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1752383..1752772 | 403..14 | 1950 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 17:54:05 has no hits.
BS14807.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:39 Download gff for
BS14807.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17648-PA | 1..387 | 17..403 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:44:40 Download gff for
BS14807.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17648-RA | 72..476 | 1..408 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:13:59 Download gff for
BS14807.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17648-RA | 72..476 | 1..408 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:13:59 Download gff for
BS14807.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1752379..1752783 | 1..408 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:44:40 Download gff for
BS14807.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 1752379..1752783 | 1..408 | 98 | | Minus |
BS14807.5prime Sequence
417 bp (417 high quality bases) assembled on 2006-10-13
> BS14807.5prime
GAAGTTATCAGTCGACATGATTTCGATTGCTCAGTTGCTGACCTCTTTTA
CGGCCGGAGCCTTGGCCTCTGCACAGGCGATTCGTTTTCTAAAAACTGCC
AACGAGGAGGAGTCGCCGGCCAAAATTTCAAGCCAGCTGGAAACTGCGGT
CATCGATGGACTGGCCACCGAGCAACCGAAGATCCTGGGCTCCGAACAGA
TCAGCAATGTCATGCAGCACATTCTGAGCAGCGAGCGCAATGCGAGTGGC
GTCTACTTGGACGCCATGCACAACCGAAGTGCCAATAAGCAGGAGTACGC
TCTGGGCTCCGAGTCGCTCAACCAAATGCTGGAGGACATCATGACCCCCG
CCGGGAGTGTGAGCAGCAGGTCCTTGTCCATGGAACCCGCCGTCGAAGCC
TAGAAGCTTTCTAGACC
BS14807.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17648-PA | 387 | CG17648-RA | 1..387 | 17..403 | 1935 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 12:14:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17648-RA | 541 | CG17648-RA | 76..471 | 17..413 | 1960 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 12:13:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1752383..1752772 | 17..406 | 1950 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-08 12:13:59 has no hits.
BS14807.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:39 Download gff for
BS14807.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17648-PA | 1..387 | 17..403 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:41:00 Download gff for
BS14807.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17648-RA | 72..475 | 12..417 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:45:35 Download gff for
BS14807.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17648-RA | 72..475 | 12..417 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:45:35 Download gff for
BS14807.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1752379..1752782 | 12..417 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:41:00 Download gff for
BS14807.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 1752379..1752782 | 12..417 | 98 | | Plus |
BS14807.complete Sequence
419 bp assembled on 2006-11-01
GenBank Submission: FJ637789
> BS14807.complete
GAAGTTATCAGTCGACATGATTTCGATTGCTCAGTTGCTGACCTCTTTTA
CGGCCGGAGCCTTGGCCTCTGCACAGGCGATTCGTTTTCTAAAAACTGCC
AACGAGGAGGAGTCGCCGGCCAAAATTTCAAGCCAGCTGGAAACTGCGGT
CATCGATGGACTGGCCACCGAGCAACCGAAGATCCTGGGCTCCGAACAGA
TCAGCAATGTCATGCAGCACATTCTGAGCAGCGAGCGCAATGCGAGTGGC
GTCTACTTGGACGCCATGCACAACCGAAGTGCCAATAAGCAGGAGTACGC
TCTGGGCTCCGAGTCGCTCAACCAAATGCTGGAGGACATCATGACCCCCG
CCGGGAGTGTGAGCAGCAGGTCCTTGTCCATGGAACCCGCCGTCGAAGCC
TAGAAGCTTTCTAGACCAT
BS14807.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:53:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17648-RA | 387 | CG17648-PA | 1..387 | 17..403 | 1935 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:53:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17648-RA | 541 | CG17648-RA | 76..465 | 17..406 | 1950 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:53:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1752383..1752772 | 17..406 | 1950 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:53:02 has no hits.
BS14807.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:35:01 Download gff for
BS14807.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17648-RA | 1..387 | 17..403 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:07:54 Download gff for
BS14807.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17648-RA | 31..435 | 12..419 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:59:32 Download gff for
BS14807.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17648-RA | 76..462 | 17..403 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:35:02 Download gff for
BS14807.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17648-RA | 31..435 | 12..419 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:29:21 Download gff for
BS14807.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17648-RA | 76..462 | 17..403 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:29:21 Download gff for
BS14807.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1752383..1752769 | 17..403 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:59:32 Download gff for
BS14807.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 1752383..1752769 | 17..403 | 100 | | Plus |
BS14807.pep Sequence
Translation from 16 to 402
> BS14807.pep
MISIAQLLTSFTAGALASAQAIRFLKTANEEESPAKISSQLETAVIDGLA
TEQPKILGSEQISNVMQHILSSERNASGVYLDAMHNRSANKQEYALGSES
LNQMLEDIMTPAGSVSSRSLSMEPAVEA*
BS14807.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:10:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17648-PA | 128 | CG17648-PA | 1..128 | 1..128 | 612 | 100 | Plus |