Clone BS14811 Report

Search the DGRC for BS14811

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:148
Well:11
Vector:pDNR-Dual
Associated Gene/TranscriptCG7560-RA
Protein status:BS14811.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14811.3prime Sequence

868 bp (830 high quality bases) assembled on 2006-10-13

> BS14811.3prime
ATGGTCTAGAAAGCTTTCACTTTTCGTAGCCTTTCTTATCCTTTTCAGAA
TCCTTTAACAGATCCAGATCTCGAAGTTCTTGCAGCACAGCCTGGACGGA
CTTAAAGCGGTTGAGTGTGAAGAAGTGGAAGCCCCAAACCCCCACATCGG
CATCCAAAACATTACGAATCGTTCGGACGGTGAGGCTAACAAAGAACCTT
CTTATCAGATCTTGGTCAGACTTCATATCCTTCATATGGGCACTATGCAG
CTGATCGAGTTGCTCTCGCAAATCATCTGGCAGATGGACGCCGGTTATTT
GCTCGATCATTGAGTAGGAGCGAAAGGATTCATGCGACATCAGTCCCACA
ACAATGGGTACCGAGATTCCAGCTGCTCGACAGTCCTTCACAAATTGCAC
TATGACCTCGGGACGGTAGCATAACTGTGTGATAATGCAATCTGCTCCAG
CATCAATCTTTGCCTTTAGAAACTCCATGTTCTTAGCTGAATTTTGTGGT
ATGTCGCCTAAACTAGTGTATCCCTCTGGATATCCACCCACACAGACTGA
TATTGTTTCACCCCTCTGCCGTATCGATTGCTCCACCATGGGGTAGCTAA
TCGAGAAATCCTGATCCTCGTGAACTCGATCCCCTCGAACGGCCAAAAGA
CTGCTAAAGTTGAGGGCCAAAAACTGATCCAGTCGCTGCCTACTCATTCG
ATAGGCGGACACATGGGGCAGCACGGGAATGCGTGTGGCCAGGTGTTGGG
CCATCTGAAGGCTCTCCACCTGACCCACTGGCTCCACGTCCCAGTACCGC
TGACTCAGCCAAACGAAGCTCACGAAGGTGGGCAGGAGCGGCAGGAAGTG
ATTAAAGTCCAGGCAGGT

BS14811.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG7560-PA 1050 CG7560-RA 199..1050 868..17 4260 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:54:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG7560-RA 1107 CG7560-RA 223..1074 868..17 4260 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:54:12
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11425920..11426362 459..17 2215 100 Minus
3L 28110227 3L 11425380..11425689 868..559 1550 100 Minus
3L 28110227 3L 11425753..11425854 559..458 510 100 Minus
Blast to na_te.dros performed on 2015-02-12 17:54:17 has no hits.

BS14811.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:41 Download gff for BS14811.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7560-PA 199..1050 17..868 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:44:43 Download gff for BS14811.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7560-RA 223..1074 17..868 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:14:19 Download gff for BS14811.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7560-RA 223..1074 17..868 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:14:19 Download gff for BS14811.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 11425380..11425689 559..868 100 -> Minus
3L 11425754..11425854 458..558 100 -> Minus
3L 11425922..11426362 17..457 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:44:43 Download gff for BS14811.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11418480..11418789 559..868 100 -> Minus
arm_3L 11418854..11418954 458..558 100 -> Minus
arm_3L 11419022..11419462 17..457 100   Minus

BS14811.5prime Sequence

761 bp (743 high quality bases) assembled on 2006-10-13

> BS14811.5prime
GAAGTTATCAGTCGACATGCATGCGATTCAAGTGCCCGCCGGTGGTTCGT
CGCCTGGTGCTGCCTCCTACATTCCCTGCGTGACCTTTGCCCCCGATCAA
AATGAATCCGTAGTGACGAAGCAGCGGATAGGAACGCTCGTGGCGGAGCG
AACAGCCCAACATCGCCTCTTCTACGGCATCGAGGTGATGGCCAGCGATC
CGAGTGGCCGGCCAACCTGCCTGGACTTTAATCACTTCCTGCCGCTCCTG
CCCACCTTCGTGAGCTTCGTTTGGCTGAGTCAGCGGTACTGGGACGTGGA
GCCAGTGGGTCAGGTGGAGAGCCTTCAGATGGCCCAACACCTGGCCACAC
GCATTCCCGTGCTGCCCCATGTGTCCGCCTATCGAATGAGTAGGCAGCGA
CTGGATCAGTTTTTGGCCCTCAACTTTAGCAGTCTTTTGGCCGTTCGAGG
GGATCGAGTTCACGAGGATCAGGATTTCTCGATTAGCTACCCCATGGTGG
AGCAATCGATACGGCAGAGGGGTGAAACAATATCAGTCTGTGTGGGTGGA
TATCCAGAGGGATACACTAGTTTAGGCGACATACCACAAAATTCAGCTAA
GAACATGGAGTTTCTAAAGGCAAAGATTGATGCTGGAGCAGATTGCATTA
TCACACAGTTATGCTACCGTCCCGAGGTCATAGTGCAATTTGTGAAGGAC
TGTCGAGCAGCTGGAATCTCGGTACCCATTGTTGTGGGACTGATGTCGCA
TGAATCCTTTC

BS14811.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG7560-PA 1050 CG7560-RA 1..745 17..761 3725 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 18:04:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG7560-RA 1107 CG7560-RA 25..769 17..761 3725 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:04:05
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11425182..11425689 17..524 2540 100 Plus
3L 28110227 3L 11425920..11426057 624..761 690 100 Plus
3L 28110227 3L 11425753..11425854 524..625 510 100 Plus
Blast to na_te.dros performed on 2015-01-30 18:04:09 has no hits.

BS14811.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:41 Download gff for BS14811.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7560-PA 1..745 17..761 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:53:35 Download gff for BS14811.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7560-RA 22..769 12..761 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:08:03 Download gff for BS14811.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7560-RA 22..769 12..761 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:08:03 Download gff for BS14811.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 11425179..11425689 12..524 99 -> Plus
3L 11425754..11425854 525..625 100 -> Plus
3L 11425922..11426057 626..761 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:53:35 Download gff for BS14811.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11418279..11418789 12..524 99 -> Plus
arm_3L 11418854..11418954 525..625 100 -> Plus
arm_3L 11419022..11419157 626..761 100   Plus

BS14811.complete Sequence

1082 bp assembled on 2006-11-01

GenBank Submission: FJ637790

> BS14811.complete
GAAGTTATCAGTCGACATGCATGCGATTCAAGTGCCCGCCGGTGGTTCGT
CGCCTGGTGCTGCCTCCTACATTCCCTGCGTGACCTTTGCCCCCGATCAA
AATGAATCCGTAGTGACGAAGCAGCGGATAGGAACGCTCGTGGCGGAGCG
AACAGCCCAACATCGCCTCTTCTACGGCATCGAGGTGATGGCCAGCGATC
CGAGTGGCCGGCCAACCTGCCTGGACTTTAATCACTTCCTGCCGCTCCTG
CCCACCTTCGTGAGCTTCGTTTGGCTGAGTCAGCGGTACTGGGACGTGGA
GCCAGTGGGTCAGGTGGAGAGCCTTCAGATGGCCCAACACCTGGCCACAC
GCATTCCCGTGCTGCCCCATGTGTCCGCCTATCGAATGAGTAGGCAGCGA
CTGGATCAGTTTTTGGCCCTCAACTTTAGCAGTCTTTTGGCCGTTCGAGG
GGATCGAGTTCACGAGGATCAGGATTTCTCGATTAGCTACCCCATGGTGG
AGCAATCGATACGGCAGAGGGGTGAAACAATATCAGTCTGTGTGGGTGGA
TATCCAGAGGGATACACTAGTTTAGGCGACATACCACAAAATTCAGCTAA
GAACATGGAGTTTCTAAAGGCAAAGATTGATGCTGGAGCAGATTGCATTA
TCACACAGTTATGCTACCGTCCCGAGGTCATAGTGCAATTTGTGAAGGAC
TGTCGAGCAGCTGGAATCTCGGTACCCATTGTTGTGGGACTGATGTCGCA
TGAATCCTTTCGCTCCTACTCAATGATCGAGCAAATAACCGGCGTCCATC
TGCCAGATGATTTGCGAGAGCAACTCGATCAGCTGCATAGTGCCCATATG
AAGGATATGAAGTCTGACCAAGATCTGATAAGAAGGTTCTTTGTTAGCCT
CACCGTCCGAACGATTCGTAATGTTTTGGATGCCGATGTGGGGGTTTGGG
GCTTCCACTTCTTCACACTCAACCGCTTTAAGTCCGTCCAGGCTGTGCTG
CAAGAACTTCGAGATCTGGATCTGTTAAAGGATTCTGAAAAGGATAAGAA
AGGCTACGAAAAGTGAAAGCTTTCTAGACCAT

BS14811.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:54:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG7560-RA 1050 CG7560-PA 1..1050 17..1066 5250 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:54:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG7560-RA 1107 CG7560-RA 25..1074 17..1066 5250 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:54:05
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11425182..11425689 17..524 2540 100 Plus
3L 28110227 3L 11425920..11426362 624..1066 2215 100 Plus
3L 28110227 3L 11425753..11425854 524..625 510 100 Plus
Blast to na_te.dros performed on 2014-11-27 16:54:06 has no hits.

BS14811.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:35:03 Download gff for BS14811.complete
Subject Subject Range Query Range Percent Splice Strand
CG7560-RA 1..1050 17..1066 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:07:55 Download gff for BS14811.complete
Subject Subject Range Query Range Percent Splice Strand
CG7560-RA 30..1082 12..1066 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:55:50 Download gff for BS14811.complete
Subject Subject Range Query Range Percent Splice Strand
CG7560-RA 25..1073 17..1065 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:35:03 Download gff for BS14811.complete
Subject Subject Range Query Range Percent Splice Strand
CG7560-RA 30..1082 12..1066 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:29:45 Download gff for BS14811.complete
Subject Subject Range Query Range Percent Splice Strand
CG7560-RA 25..1073 17..1065 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:29:45 Download gff for BS14811.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11425182..11425689 17..524 100 -> Plus
3L 11425754..11425854 525..625 100 -> Plus
3L 11425922..11426361 626..1065 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:55:50 Download gff for BS14811.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11418282..11418789 17..524 100 -> Plus
arm_3L 11418854..11418954 525..625 100 -> Plus
arm_3L 11419022..11419461 626..1065 100   Plus

BS14811.pep Sequence

Translation from 16 to 1065

> BS14811.pep
MHAIQVPAGGSSPGAASYIPCVTFAPDQNESVVTKQRIGTLVAERTAQHR
LFYGIEVMASDPSGRPTCLDFNHFLPLLPTFVSFVWLSQRYWDVEPVGQV
ESLQMAQHLATRIPVLPHVSAYRMSRQRLDQFLALNFSSLLAVRGDRVHE
DQDFSISYPMVEQSIRQRGETISVCVGGYPEGYTSLGDIPQNSAKNMEFL
KAKIDAGADCIITQLCYRPEVIVQFVKDCRAAGISVPIVVGLMSHESFRS
YSMIEQITGVHLPDDLREQLDQLHSAHMKDMKSDQDLIRRFFVSLTVRTI
RNVLDADVGVWGFHFFTLNRFKSVQAVLQELRDLDLLKDSEKDKKGYEK*

BS14811.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:10:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG7560-PA 349 CG7560-PA 1..349 1..349 1809 100 Plus