Clone BS14813 Report

Search the DGRC for BS14813

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:148
Well:13
Vector:pDNR-Dual
Associated Gene/TranscriptAct79B-RA
Protein status:BS14813.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14813.3prime Sequence

862 bp (736 high quality bases) assembled on 2006-10-13

> BS14813.3prime
ATGGTCTAGAAAGCTTTTAGAAGCACTTGCGGTGGACGATGCCGGGACCG
GACTCGTCATACTCCTGCTTGGAGATCCACATCTGCTGGAAGGTGGACAA
CGAAGCCAGGATGGAGCCACCGATCCAGACGGAGTACTTGCGCTCTGGCG
GGGCGATGATCTTGATCTTGATGGTGGACGGGGCAAGTGCGGTGATTTCC
TTTTGCATACGGTCAGCGATACCTGGATACATGGTAGTGCCGCCAGACAG
CACATTGTTGGCATACAGATCCTTGCGGATGTCCACGTCGCACTTCATGA
TGGACTGGTAGACGGTCTCGTGGATGCCGCAGGACTCCATGCCCAGGAAC
GATGGCTGGAAGAGGGCCTCCGGGGTGCGGAAGCGCTCGTTGCCGATGGT
GATTACCTGGCCATCGGGCAGCTCGTAAGACTTCTCCAGGGAGGTGGAGG
CGGCGGCAGTGGCCATCTCCTGCTCGAAGTCCAGGGCGACGTAGCACAGC
TTCTCCTTGATGTCGCGCACAATCTCGCGCTCGGCGGTGGTGGTGAAGCT
GTAGCCGCGCTCGGTGAGGATCTTCATCAGGTAGTCGGTTAGATCGCGAC
CGGCCAGATCTAGACGAAGGATGGCGTGGGGCAGGGCATAGCCCTCATAG
ATGGGCACGGTGTGGGAGACACCGTCACCGGAGTCCAGGACGATACCGGT
GGTACGGCCGGAGGCGTACAGGGAGAGCACGGCCTGGATGGCCACGTACA
TGGCCGGGGAGTTGAACGTCTCGAACATGATCTGGGTCATCTTCTCGCGG
TTGGCCTTGGAGTTCAAGGGAGCCTCGGTCAGCAGAACGGGGTGCTCCTC
GGGGGCCACACG

BS14813.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG7478-PA 1131 Act79B-RA 286..1131 862..17 4205 99.8 Minus
CG5178-PA 1131 Act88F-RA 317..992 831..156 1855 90.9 Minus
CG10067-PA 1131 Act57B-RA 286..597 862..551 935 91.9 Minus
CG12051-PA 1131 Act42A-RA 286..695 862..453 925 89 Minus
CG18290-PA 1131 Act87E-RA 292..593 856..555 885 91.7 Minus
CG18290-PB 1131 Act87E-RB 292..593 856..555 885 91.7 Minus
CG4027-PB 1131 Act5C-RB 286..593 862..555 840 90.9 Minus
CG4027-PA 1131 Act5C-RA 286..593 862..555 840 90.9 Minus
CG4027-PC 1131 Act5C-RC 286..593 862..555 840 90.9 Minus
CG4027-PD 1131 Act5C-RD 286..593 862..555 840 90.9 Minus
CG4027-PB 1131 Act5C-RB 844..1100 304..48 685 90.6 Minus
CG4027-PA 1131 Act5C-RA 844..1100 304..48 685 90.6 Minus
CG4027-PC 1131 Act5C-RC 844..1100 304..48 685 90.6 Minus
CG4027-PD 1131 Act5C-RD 844..1100 304..48 685 90.6 Minus
CG18290-PA 1131 Act87E-RA 937..1131 211..17 600 92.3 Minus
CG18290-PB 1131 Act87E-RB 937..1131 211..17 600 92.3 Minus
CG10067-PA 1131 Act57B-RA 937..1131 211..17 550 91.2 Minus
CG10067-PA 1131 Act57B-RA 601..770 547..378 475 91.1 Minus
CG18290-PA 1131 Act87E-RA 601..761 547..387 430 90.6 Minus
CG18290-PB 1131 Act87E-RB 601..761 547..387 430 90.6 Minus
CG5178-PA 1131 Act88F-RA 1009..1127 139..21 395 93.2 Minus
CG4027-PB 1131 Act5C-RB 710..834 438..314 275 88.8 Minus
CG4027-PA 1131 Act5C-RA 710..834 438..314 275 88.8 Minus
CG4027-PC 1131 Act5C-RC 710..834 438..314 275 88.8 Minus
CG4027-PD 1131 Act5C-RD 710..834 438..314 275 88.8 Minus
CG12051-PA 1131 Act42A-RA 847..956 301..192 275 90 Minus
CG12051-PA 1131 Act42A-RA 994..1097 154..51 270 90.3 Minus
CG10067-PA 1131 Act57B-RA 787..892 361..256 255 89.6 Minus
CG18290-PA 1131 Act87E-RA 787..887 361..261 230 89.1 Minus
CG18290-PB 1131 Act87E-RB 787..887 361..261 230 89.1 Minus
CG4027-PB 1131 Act5C-RB 634..689 514..459 180 92.8 Minus
CG4027-PA 1131 Act5C-RA 634..689 514..459 180 92.8 Minus
CG4027-PC 1131 Act5C-RC 634..689 514..459 180 92.8 Minus
CG4027-PD 1131 Act5C-RD 634..689 514..459 180 92.8 Minus
CG12051-PA 1131 Act42A-RA 706..755 442..393 150 92 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:50:58
Subject Length Description Subject Range Query Range Score Percent Strand
Act79B-RB 1619 CG7478-RB 427..1272 862..17 4215 99.9 Minus
Act79B-RA 1543 CG7478-RA 351..1196 862..17 4215 99.9 Minus
Act88F-RA 1595 CG5178-RA 383..1225 859..17 2985 90.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:50:51
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21985636..21986277 862..221 3195 99.8 Minus
2R 25286936 2R 20945089..20945934 862..17 2895 89.5 Minus
3R 32079331 3R 13426895..13427734 856..17 2820 89 Minus
2R 25286936 2R 6014270..6015115 17..862 2520 86.5 Plus
3L 28110227 3L 21986635..21986843 225..17 1045 100 Minus
2R 25286936 2R 16774843..16774956 736..623 195 78.1 Minus
Blast to na_te.dros performed on 2015-02-03 06:50:54 has no hits.

BS14813.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:42 Download gff for BS14813.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7478-PA 286..1131 17..862 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:32:22 Download gff for BS14813.3prime
Subject Subject Range Query Range Percent Splice Strand
Act79B-RA 351..1198 13..862 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:40:00 Download gff for BS14813.3prime
Subject Subject Range Query Range Percent Splice Strand
Act79B-RA 351..1198 13..862 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:40:00 Download gff for BS14813.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 21985636..21986275 223..862 99 -> Minus
3L 21986638..21986845 13..222 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:32:22 Download gff for BS14813.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21978736..21979375 223..862 99 -> Minus
arm_3L 21979738..21979945 13..222 99   Minus

BS14813.5prime Sequence

830 bp (716 high quality bases) assembled on 2006-10-13

> BS14813.5prime
GAAGTTATCAGTCGACATGTGTGACGAAGAAGCATCAGCCCTGGTCGTAG
ACAACGGCTCCGGCATGTGCAAGGCCGGATTCGCCGGAGACGACGCGCCC
CGCGCCGTATTCCCCTCGATCGTAGGCCGTCCCCGTCACCAGGGCGTGAT
GGTGGGTATGGGTCAGAAGGACTGCTACGTGGGCGACGAGGCGCAGAGCA
AGCGCGGTATCCTGTCGCTGAAGTACCCCATCGAACACGGCATTATCACC
AACTGGGATGACATGGAGAAGGTCTGGCACCACACCTTCTACAACGAGCT
GCGTGTGGCCCCCGAGGAGCACCCCGTTCTGCTGACCGAGGCTCCCTTGA
ACCCCAAGGCCAACCGCGAGAAGATGACCCAGATCATGTTCGAGACGTTC
AACTCCCCGGCCATGTACGTGGCCATCCAGGCCGTGCTCTCCCTGTACGC
CTCCGGCCGTACCACCGGTATCGTCCTGGACTCCGGTGACGGTGTCTCCC
ACACCGTGCCCATCTATGAGGGCTATGCCCTGCCCCACGCCATCCTTCGT
CTAGATCTGGCCGGTCGCGATCTAACCGACTACCTGATGAAGATCCTCAC
CGAGCGCGGCTACAGCTTCACCACCACCGCCGAGCGCGAGATTGTGCGCG
ACATCAAGGAGAAGCTGTGCTACGTCGCCCTGGACTTCGAGCAGGAGATG
GCCACTGCCGCCGCCTCCACCTCCCTGGAGAAGTCTTACGAGCTGCCCGA
TGGCCAGGTAATCACCATCGGCAACGAGCGCTTCCGCACCCCGGAGGCCC
TCTTCCAGCCATCGTTCCTGGGCATGGAGT

BS14813.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG7478-PA 1131 Act79B-RA 1..814 17..830 4070 100 Plus
CG5178-PA 1131 Act88F-RA 317..814 333..830 1515 92.1 Plus
CG10067-PA 1131 Act57B-RA 202..597 218..613 1230 92.4 Plus
CG18290-PA 1131 Act87E-RA 202..593 218..609 1110 91.3 Plus
CG18290-PB 1131 Act87E-RB 202..593 218..609 1110 91.3 Plus
CG12051-PA 1131 Act42A-RA 235..695 251..711 1080 89.3 Plus
CG4027-PB 1131 Act5C-RB 232..593 248..609 1035 91.4 Plus
CG4027-PA 1131 Act5C-RA 232..593 248..609 1035 91.4 Plus
CG4027-PC 1131 Act5C-RC 232..593 248..609 1035 91.4 Plus
CG4027-PD 1131 Act5C-RD 232..593 248..609 1035 91.4 Plus
CG5178-PA 1131 Act88F-RA 34..305 50..321 685 90 Plus
CG10067-PA 1131 Act57B-RA 601..770 617..786 475 91.1 Plus
CG18290-PA 1131 Act87E-RA 601..761 617..777 430 90.6 Plus
CG18290-PB 1131 Act87E-RB 601..761 617..777 430 90.6 Plus
CG4027-PB 1131 Act5C-RB 34..197 50..213 370 89 Plus
CG4027-PA 1131 Act5C-RA 34..197 50..213 370 89 Plus
CG4027-PC 1131 Act5C-RC 34..197 50..213 370 89 Plus
CG4027-PD 1131 Act5C-RD 34..197 50..213 370 89 Plus
CG10067-PA 1131 Act57B-RA 25..157 41..173 265 87.9 Plus
CG18290-PA 1131 Act87E-RA 26..157 42..173 260 87.8 Plus
CG18290-PB 1131 Act87E-RB 26..157 42..173 260 87.8 Plus
CG4027-PB 1131 Act5C-RB 710..813 726..829 220 88.4 Plus
CG4027-PA 1131 Act5C-RA 710..813 726..829 220 88.4 Plus
CG4027-PC 1131 Act5C-RC 710..813 726..829 220 88.4 Plus
CG4027-PD 1131 Act5C-RD 710..813 726..829 220 88.4 Plus
CG4027-PB 1131 Act5C-RB 634..689 650..705 180 92.8 Plus
CG4027-PA 1131 Act5C-RA 634..689 650..705 180 92.8 Plus
CG4027-PC 1131 Act5C-RC 634..689 650..705 180 92.8 Plus
CG4027-PD 1131 Act5C-RD 634..689 650..705 180 92.8 Plus
CG12051-PA 1131 Act42A-RA 706..755 722..771 150 92 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:05:07
Subject Length Description Subject Range Query Range Score Percent Strand
Act79B-RB 1619 CG7478-RB 140..955 15..830 4080 100 Plus
Act79B-RA 1543 CG7478-RA 64..879 15..830 4080 100 Plus
Act88F-RA 1595 CG5178-RA 128..908 50..830 2825 90.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:04:57
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21985349..21986164 15..830 4080 100 Plus
3R 32079331 3R 15440649..15441429 50..830 2825 90.8 Plus
2R 25286936 2R 20944843..20945615 56..828 2620 89.3 Plus
3R 32079331 3R 13426604..13427415 17..828 2590 87.9 Plus
Blast to na_te.dros performed on 2015-02-10 17:05:02 has no hits.

BS14813.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:42 Download gff for BS14813.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7478-PA 1..814 17..830 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 20:16:46 Download gff for BS14813.5prime
Subject Subject Range Query Range Percent Splice Strand
Act79B-RA 61..879 9..830 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:52:44 Download gff for BS14813.5prime
Subject Subject Range Query Range Percent Splice Strand
Act79B-RA 61..879 9..830 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:52:44 Download gff for BS14813.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 21985346..21986164 9..830 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 20:16:46 Download gff for BS14813.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21978446..21979264 9..830 99   Plus

BS14813.complete Sequence

1163 bp assembled on 2006-11-01

GenBank Submission: FJ637791

> BS14813.complete
GAAGTTATCAGTCGACATGTGTGACGAAGAAGCATCAGCCCTGGTCGTAG
ACAACGGCTCCGGCATGTGCAAGGCCGGATTCGCCGGAGACGACGCGCCC
CGCGCCGTATTCCCCTCGATCGTAGGCCGTCCCCGTCACCAGGGCGTGAT
GGTGGGTATGGGTCAGAAGGACTGCTACGTGGGCGACGAGGCGCAGAGCA
AGCGCGGTATCCTGTCGCTGAAGTACCCCATCGAACACGGCATTATCACC
AACTGGGATGACATGGAGAAGGTCTGGCACCACACCTTCTACAACGAGCT
GCGTGTGGCCCCCGAGGAGCACCCCGTTCTGCTGACCGAGGCTCCCTTGA
ACCCCAAGGCCAACCGCGAGAAGATGACCCAGATCATGTTCGAGACGTTC
AACTCCCCGGCCATGTACGTGGCCATCCAGGCCGTGCTCTCCCTGTACGC
CTCCGGCCGTACCACCGGTATCGTCCTGGACTCCGGTGACGGTGTCTCCC
ACACCGTGCCCATCTATGAGGGCTATGCCCTGCCCCACGCCATCCTTCGT
CTAGATCTGGCCGGTCGCGATCTAACCGACTACCTGATGAAGATCCTCAC
CGAGCGCGGCTACAGCTTCACCACCACCGCCGAGCGCGAGATTGTGCGCG
ACATCAAGGAGAAGCTGTGCTACGTCGCCCTGGACTTCGAGCAGGAGATG
GCCACTGCCGCCGCCTCCACCTCCCTGGAGAAGTCTTACGAGCTGCCCGA
TGGCCAGGTAATCACCATCGGCAACGAGCGCTTCCGCACCCCGGAGGCCC
TCTTCCAGCCATCGTTCCTGGGCATGGAGTCCTGCGGCATCCACGAGACC
GTCTACCAGTCCATCATGAAGTGCGACGTGGACATCCGCAAGGATCTGTA
TGCCAACAATGTGCTGTCTGGCGGCACTACCATGTATCCAGGTATCGCTG
ACCGTATGCAAAAGGAAATCACCGCACTTGCCCCGTCCACCATCAAGATC
AAGATCATCGCCCCGCCAGAGCGCAAGTACTCCGTCTGGATCGGTGGCTC
CATCCTGGCTTCGTTGTCCACCTTCCAGCAGATGTGGATCTCCAAGCAGG
AGTATGACGAGTCCGGTCCCGGCATCGTCCACCGCAAGTGCTTCTAAAAG
CTTTCTAGACCAT

BS14813.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:42:37
Subject Length Description Subject Range Query Range Score Percent Strand
Act79B-RB 1131 CG7478-PB 1..1131 17..1147 5655 100 Plus
Act79B-RA 1131 CG7478-PA 1..1131 17..1147 5655 100 Plus
Act88F-RA 1131 CG5178-PA 34..1131 50..1147 3870 90.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:42:39
Subject Length Description Subject Range Query Range Score Percent Strand
Act79B-RB 1619 CG7478-RB 140..1272 15..1147 5665 100 Plus
Act79B-RA 1543 CG7478-RA 64..1196 15..1147 5665 100 Plus
Act88F-RA 1595 CG5178-RA 128..1225 50..1147 3870 90.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:42:35
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21985349..21986277 15..943 4645 100 Plus
2R 25286936 2R 20944843..20945934 56..1147 3660 89 Plus
X 23542271 X 5902698..5903828 17..1147 3630 88.1 Plus
3R 32079331 3R 13426604..13427734 17..1147 3630 88.1 Plus
3R 32079331 3R 15440649..15441543 50..944 3230 90.7 Plus
2R 25286936 2R 6014270..6015400 1147..17 3150 85.2 Minus
3L 28110227 3L 21986635..21986843 939..1147 1045 100 Plus
3R 32079331 3R 15441599..15441807 939..1147 670 88 Plus
2R 25286936 2R 16774843..16774956 428..541 195 78.1 Plus
Blast to na_te.dros performed on 2014-11-27 13:42:36 has no hits.

BS14813.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:35:07 Download gff for BS14813.complete
Subject Subject Range Query Range Percent Splice Strand
Act79B-RA 1..1131 17..1147 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:07:59 Download gff for BS14813.complete
Subject Subject Range Query Range Percent Splice Strand
Act79B-RA 40..1177 9..1151 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:22:47 Download gff for BS14813.complete
Subject Subject Range Query Range Percent Splice Strand
Act79B-RA 66..1194 17..1145 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:35:07 Download gff for BS14813.complete
Subject Subject Range Query Range Percent Splice Strand
Act79B-RA 40..1177 9..1151 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:54:08 Download gff for BS14813.complete
Subject Subject Range Query Range Percent Splice Strand
Act79B-RA 66..1194 17..1145 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:54:08 Download gff for BS14813.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21985351..21986275 17..941 100 -> Plus
3L 21986638..21986841 942..1145 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:22:47 Download gff for BS14813.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21978451..21979375 17..941 100 -> Plus
arm_3L 21979738..21979941 942..1145 100   Plus

BS14813.pep Sequence

Translation from 16 to 1146

> BS14813.pep
MCDEEASALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ
KDCYVGDEAQSKRGILSLKYPIEHGIITNWDDMEKVWHHTFYNELRVAPE
EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS
FTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVIT
IGNERFRTPEALFQPSFLGMESCGIHETVYQSIMKCDVDIRKDLYANNVL
SGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASL
STFQQMWISKQEYDESGPGIVHRKCF*

BS14813.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:10:12
Subject Length Description Subject Range Query Range Score Percent Strand
Act79B-PB 376 CG7478-PB 1..376 1..376 1966 100 Plus
Act79B-PA 376 CG7478-PA 1..376 1..376 1966 100 Plus
Act88F-PA 376 CG5178-PA 1..376 1..376 1921 97.1 Plus
Act87E-PC 376 CG18290-PC 1..376 1..376 1914 96.8 Plus
Act87E-PB 376 CG18290-PB 1..376 1..376 1914 96.8 Plus