Clone Sequence Records
BS14814.3prime Sequence
893 bp (745 high quality bases) assembled on 2006-10-13
> BS14814.3prime
ATGGTCTAGAAAGCTTTCAATGAACCGGCACCGTGATGCGTGGCGATAAG
GTTTTGGTCGCGCTGCGATTCCGGCGCTGCAAAAACAGCTTCACGTTCTT
CAGGGGCAGCTGGAAATGATAGTATGCGCAATAGGGTAGTGGATCCCAGT
AGGCAAACAATGCCTCCCGCTTGTCCAGCGCCGTCGTCGAAGTGGTTCTC
TCCAGCGCCGACCAGCTCCAGTTGGGCAGTTCATCCTCGGGCAGTCCCCG
CCTGTGGATGCACTTCATCGCACGGCACAGCAACTGGGCATGCGATCGAT
TGTGGCATATGTAGGGCAGGGCCACGCCCAGTCGCGTGCCCAGAGGCACG
AACTGACCACCATGGGCGGGGCTCTTGACCAGGCGGAAGCTTATATGCCC
ATTGATGGGCCTCTGGAAGCGCACCTTGGCAAAGAAGGAGCGCAACCAGA
GTTCTATCTGCGCCTCATCGTCCCTGGGCACTGGGATCAGATTCTTGGTA
TGATGCTCAACCCGACAACTCACATTGGCCACCACCCGTGAATCCTTGAC
GGTGGTGCAGGTCACATAGTGGTGATAGCCCGGCTGATCCCTTACCACTA
GCCACGGTTGCCGCTCGCTGATATCGTGCTGATTCAGCTTTAGTTCCGCC
CGCCTATTGGGCAGTATGTACTTGTGCCGCTCCAGGACTCCCTGCATCCC
TGCGGCCATGAGTATGTTCCTATAGCTGCCCACGAAACCGCTCTCGTAGA
TCTGCTGCAATTGCCGTGGAGCTGTCAGCACCACATGGGCTGGCAGAGCC
ATCTGTTGCTGTTCGCATCTCTGAAAGAGCTGGAGGCAGTCCTCCAGCTG
CAGTGTCTCCTGGCCGCCGGGGATGAAACTGGCACAGCCCAAG
BS14814.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13607-PA | 1641 | CG13607-RA | 767..1641 | 891..17 | 4275 | 99.5 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:05:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13607-RC | 2210 | CG13607-RC | 943..1818 | 891..16 | 4320 | 99.5 | Minus |
| CG13607-RA | 2129 | CG13607-RA | 862..1737 | 891..16 | 4320 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:05:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24114435..24115310 | 16..891 | 4320 | 99.5 | Plus |
Blast to na_te.dros performed on 2015-02-10 17:05:32 has no hits.
BS14814.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:43 Download gff for
BS14814.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13607-PA | 765..1641 | 17..893 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 20:16:50 Download gff for
BS14814.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13607-RA | 860..1737 | 16..893 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:52:46 Download gff for
BS14814.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13607-RA | 860..1737 | 16..893 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:52:46 Download gff for
BS14814.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24114435..24115311 | 16..893 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 20:16:50 Download gff for
BS14814.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19940157..19941033 | 16..893 | 99 | | Plus |
BS14814.5prime Sequence
814 bp (780 high quality bases) assembled on 2006-10-13
> BS14814.5prime
GAAGTTATCAGTCGACATGTCCCAGACCCTGGACGATCTGCTGTTGCGCC
AGGAGCACGCCCGGCAATTGCGCCAGGCCACGCGCTCCAAGTTCCGGCGC
ATCAATTCGCTGGATCTAATACCGGAGCATCCCAGCCAATCGGAGGAGGA
GGAGGACAAGGAATCCCAGACGGCCCACAAGCACTTTGTCACCCTGAGAC
GACAGCGGACGGCTGATGGCAATCTGCTGAGGCATCAGTTTCAGACGCAG
TCGCCGCCACAACCCAATTTAGGCACACGGGTCCTGCTCTTCGGACCACA
ACTGCTGATGCGTCTGGTGCTGACCATCTTGAGATACGTCCTCTACATAC
CACTGTCCATTGCGGCGCCAAGCTTTTGGTTGTCCGCCCTGCTCTGGATC
TTTTGGAAACTGCTGCGGGTACCCATTGCGTTGGTCAAGTGGCTACTGAG
CGGCGAGGAGGAGCTGGGTGCAGTGCAGCGACAGAAGACCATACTCCTCA
GCTGCGGCAGCACCATACAGACCCTACATTTGGCCAGGAACTTCTACGGA
TCCGGCGCCCGTGTGGTGGTCTTTGAGTTCGAGGGTTTGTTCGGATTGGC
CAGATTTTCCACAGCGGTGGACAAATTCTATGTGGTGCCACGGCCAACGG
CCAGTAATCCGGATCAGTACATAGCCGCCCTGTGCCACATCGTGAAGAAG
GAACGACCCTCGGTCTATATACCCGTTTGTGCCACCAGTCCGGCATACTA
TGATTCCCTGGCCCGACCACATCTGGAGGTCCTGGGCTGTGCCAGTTTCA
TACCCGGCGTGCAG
BS14814.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13607-PA | 1641 | CG13607-RA | 1..798 | 17..814 | 3990 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:20:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13607-RC | 2210 | CG13607-RC | 177..974 | 17..814 | 3990 | 100 | Plus |
| CG13607-RA | 2129 | CG13607-RA | 96..893 | 17..814 | 3990 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:20:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24115279..24116076 | 814..17 | 3990 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-31 10:20:54 has no hits.
BS14814.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:43 Download gff for
BS14814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13607-PA | 1..798 | 17..814 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:37:10 Download gff for
BS14814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13607-RA | 89..893 | 10..814 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:46:10 Download gff for
BS14814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13607-RA | 89..893 | 10..814 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:46:10 Download gff for
BS14814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24115279..24116083 | 10..814 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:37:10 Download gff for
BS14814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19941001..19941805 | 10..814 | 99 | | Minus |
BS14814.complete Sequence
1673 bp assembled on 2006-11-01
GenBank Submission: FJ637792
> BS14814.complete
GAAGTTATCAGTCGACATGTCCCAGACCCTGGACGATCTGCTGTTGCGCC
AGGAGCACGCCCGGCAATTGCGCCAGGCCACGCGCTCCAAGTTCCGGCGC
ATCAATTCGCTGGATCTAATACCGGAGCATCCCAGCCAATCGGAGGAGGA
GGAGGACAAGGAATCCCAGACGGCCCACAAGCACTTTGTCACCCTGAGAC
GACAGCGGACGGCTGATGGCAATCTGCTGAGGCATCAGTTTCAGACGCAG
TCGCCGCCACAACCCAATTTAGGCACACGGGTCCTGCTCTTCGGACCACA
ACTGCTGATGCGTCTGGTGCTGACCATCTTGAGATACGTCCTCTACATAC
CACTGTCCATTGCGGCGCCAAGCTTTTGGTTGTCCGCCCTGCTCTGGATC
TTTTGGAAACTGCTGCGGGTACCCATTGCGTTGGTCAAGTGGCTACTGAG
CGGCGAGGAGGAGCTGGGTGCAGTGCAGCGACAGAAGACCATACTCCTCA
GCTGCGGCAGCACCATACAGACCCTACATTTGGCCAGGAACTTCTACGGA
TCCGGCGCCCGTGTGGTGGTCTTTGAGTTCGAGGGTTTGTTCGGATTGGC
CAGATTTTCCACAGCGGTGGACAAATTCTATGTGGTGCCACGGCCAACGG
CCAGTAATCCGGATCAGTACATAGCCGCCCTGTGCCACATCGTGAAGAAG
GAACGACCCTCGGTCTATATACCCGTTTGTGCCACCAGTCCGGCATACTA
TGATTCCCTGGCCCGACCACATCTGGAGGTCCTGGGCTGTGCCAGTTTCA
TACCCGGCGTGCAGGAGACACTGCAGCTGGATGACTGCCTCCAGCTCTTT
CAGAGATGCGAACAGCAACAGATGGCTCTGCCAGCCCATGTGGTGCTGAC
AGCTCCACGGCAATTGCAGCAGATCTACGAGAGCGGTTTCGTGGGCAGCT
ATAGGAACATACTCATGGCCGCAGGGATGCAGGGAGTCCTGGAGCGGCAC
AAGTACATACTGCCCAATAGGCGGGCGGAACTAAAGCTGAATCAGCACGA
TATCAGCGAGCGGCAACCGTGGCTAGTGGTAAGGGATCAGCCGGGCTATC
ACCACTATGTGACCTGCACCACCGTCAAGGATTCACGGGTGGTGGCCAAT
GTGAGTTGTCGGGTTGAGCATCATACCAAGAATCTGATCCCAGTGCCCAG
GGACGATGAGGCGCAGATAGAACTCTGGTTGCGCTCCTTCTTTGCCAAGG
TGCGCTTCCAGAGGCCCATCAATGGGCATATAAGCTTCCGCCTGGTCAAG
AGCCCCGCCCATGGTGGTCAGTTCGTGCCTCTGGGCACGCGACTGGGCGT
GGCCCTGCCCTACATATGCCACAATCGATCGCATGCCCAGTTGCTGTGCC
GTGCGATGAAGTGCATCCACAGGCGGGGACTGCCCGAGGATGAACTGCCC
AACTGGAGCTGGTCGGCGCTGGAGAGAACCACTTCGACGACGGCGCTGGA
CAAGCGGGAGGCATTGTTTGCCTACTGGGATCCACTACCCTATTGCGCAT
ACTATCATTTCCAGCTGCCCCTGAAGAACGTGAAGCTGTTTTTGCAGCGC
CGGAATCGCAGCGCGACCAAAACCTTATCGCCACGCATCACGGTGCCGGT
TCATTGAAAGCTTTCTAGACCAT
BS14814.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:14:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13607-RC | 1641 | CG13607-PC | 1..1641 | 17..1657 | 8205 | 100 | Plus |
| CG13607-RA | 1641 | CG13607-PA | 1..1641 | 17..1657 | 8205 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:14:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13607-RC | 2210 | CG13607-RC | 177..1818 | 17..1658 | 8210 | 100 | Plus |
| CG13607-RA | 2129 | CG13607-RA | 96..1737 | 17..1658 | 8210 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:14:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24114435..24116076 | 1658..17 | 8210 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:14:04 has no hits.
BS14814.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:35:08 Download gff for
BS14814.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13607-RA | 1..1641 | 17..1657 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:08:00 Download gff for
BS14814.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13607-RA | 63..1711 | 10..1658 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:50:05 Download gff for
BS14814.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13607-RA | 96..1735 | 17..1656 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:35:09 Download gff for
BS14814.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13607-RA | 63..1711 | 10..1658 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:09:12 Download gff for
BS14814.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13607-RA | 96..1735 | 17..1656 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:09:12 Download gff for
BS14814.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24114437..24116076 | 17..1656 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:50:05 Download gff for
BS14814.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19940159..19941798 | 17..1656 | 100 | | Minus |
BS14814.pep Sequence
Translation from 16 to 1656
> BS14814.pep
MSQTLDDLLLRQEHARQLRQATRSKFRRINSLDLIPEHPSQSEEEEDKES
QTAHKHFVTLRRQRTADGNLLRHQFQTQSPPQPNLGTRVLLFGPQLLMRL
VLTILRYVLYIPLSIAAPSFWLSALLWIFWKLLRVPIALVKWLLSGEEEL
GAVQRQKTILLSCGSTIQTLHLARNFYGSGARVVVFEFEGLFGLARFSTA
VDKFYVVPRPTASNPDQYIAALCHIVKKERPSVYIPVCATSPAYYDSLAR
PHLEVLGCASFIPGVQETLQLDDCLQLFQRCEQQQMALPAHVVLTAPRQL
QQIYESGFVGSYRNILMAAGMQGVLERHKYILPNRRAELKLNQHDISERQ
PWLVVRDQPGYHHYVTCTTVKDSRVVANVSCRVEHHTKNLIPVPRDDEAQ
IELWLRSFFAKVRFQRPINGHISFRLVKSPAHGGQFVPLGTRLGVALPYI
CHNRSHAQLLCRAMKCIHRRGLPEDELPNWSWSALERTTSTTALDKREAL
FAYWDPLPYCAYYHFQLPLKNVKLFLQRRNRSATKTLSPRITVPVH*
BS14814.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:10:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13607-PC | 546 | CG13607-PC | 1..546 | 1..546 | 2876 | 100 | Plus |
| CG13607-PA | 546 | CG13607-PA | 1..546 | 1..546 | 2876 | 100 | Plus |
