Clone BS14816 Report

Search the DGRC for BS14816

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:148
Well:16
Vector:pDNR-Dual
Associated Gene/TranscriptReps-RA
Protein status:BS14816.pep: full length peptide match
Sequenced Size:2756

Clone Sequence Records

BS14816.complete Sequence

2756 bp assembled on 2009-12-07

GenBank Submission: KX806022

> BS14816.complete
GAAGTTATCAGTCGACATGGACGTGTCCCTCACTGAGCCGGAGACGCGCT
TCTACAGTGAGTTGTTCCAATGCTGCGACGTGGAGAAGACAGGCAAGGTG
CCCATGCTTAAGGCCACCGAGCTCTTTCGCTCGGCGGACATCGCCAATGA
GACCGTGATTGAGATCACCGGTCTGGCGGGGATACCCTCCACGGCGCTAC
ACATCTCGCGGACACAGTTCTACTCATGCCTGAAGCTAATCGCTGCTCAT
CAGGCGGCCATGCCCCTGCGCCAGGAGCTGATCTTGGCCACGTTTCCGCT
TCCATTACCGCACTTTAGCTGGAAGGAGGCGGTTACAGCTCCGGTGGCTG
TCGAAAATGGATTGACTGCCTTGCCACCGCCACCACCCACAGATCGCAGA
AATTCACTGCGTCGTAACTCGCAGCAAGAGCAGCTGCAAGACACCTCTGA
TGTGCCCAGCACCGACTCCGAGGTTGAGCAAAACGAATCAGTGGACGATG
CGACAGGCCATGGACGAGGTACGGATGGCTGTGGGGTCGTCAGCAGCAGC
AGCCGCGAAAATGTCGGGCGACGACGAGGAGGCGGTACTGGTGGTGGATC
GCCAGAAGCCTGGAGCACTAACAGTGACAGCCCCACGCCCACCAACAGCG
TGGCTGAGCGGCCTTGGGCGCAGGACACCCTCTGGCAGGGTTTGCTGGGC
GACGAGCATCGCCAGCTGCTAGGCACGGAGGAAGAGTCTTCCGATCGCCA
CAGCAGCGACGACGATGACAACGAGAGCGAATTGGTGACCATTTACCAGA
TAACCCCGGAACAGCGCGAGTACTATAATAAGCAGTTCAGGACGGTGCAA
AGGGATCCGCATGGTCTGCTTTCGGGCCAAGCAGCAAGAAACTTTTTTGA
AAAGAGCCGCATTCCTGTGGAGGAGCTACGTCACATTTGGCAGTTGTGTG
ACGTTACCCGCGATGGAGCGCTAAGTCTGTCTGAGTTTACGGCCGCCATG
CATTTGGTGGTTCTACGGCGCAACAACATTCCCTTGCCCACAAGTCTGCC
CCACTGTTTGCATCCCAACGTGCTACAAGCAGCTGCGTCCGGCAGTGGAC
AGGGGGTGACATCCTCGTCATCGGCGGCGCTGCCTCAGGAGCCACCTGAG
GCTGATCTCCTGCACCTAAATGATGACGATGAGGACGACCATACGGATAA
TACAATCATAGCAGGCAATCTCAGCGGCAGCAGTACGACCAGCAAACCGC
GTCCCAATGTGCCCAGCGACAAGAACATCATGAATCTGAGCAGCATATCC
ACGTCCTCGCAGGCTAGCAACAGTTCCAAACGTGAGGCAACACCACAGAA
TTCTTTGGGCAAGAACCGAAGCATCTCAAACTCGCCGAATGTGGAAAAAC
CTGTGTCGGGAACTGTTTCCTCTACGGCAAGCGCTGTAGACTCGACCAAC
GTCTCCAGTCAGTGGACAAAGTTTAGCGAATCTCCAACAACAAGTGCGGT
TTCGGTACAGTCAACCACTGGGGCAGCACCTGTTGTAGCAGCCGGAGCAG
CCGCTTCTGGCGCATCTAGTCCCGGGCTCAAGCCAGTCCTGTTTGATATG
AAGCGCTCGGCCCAAGACGTGGTATCCAATCCGCAGATTCTGCACCCAGT
GCCGCTAAGAGTGACGCCCATTGGCACCGCCATCGCTTCCTCAGCTGAGT
CATCTAACGAAAACGAGAGCGCGGTGGCTCAGCGCGAGGATAGTCCCAAG
GCCATCTCTTCGACTACTGTCAATAATCAGTCATCTGCTGTTGTACCCGG
AATATCGGGAGTCGCTGGCTCCTCCCACCGCGATAGCAGCGATCTGCGTG
CCATCCAACGGCCTCAAGCCAAAAAGCTGCCGGCCAAGAACAGTGCATTG
CCACCGCCACCGCAACGCGAGCCCAGTATCGGATCCACTGGGCCAAGTGA
GTCGCAGGAACCGCAGGCTGCCTACGTGGCATCGTCTTTGGCGTCGAAGA
AGGAGCCACCGCCTCTGCCACCGCCAAGGCCACATCGTCATGCACGGAGC
AGCAGTCTGGACTTAAACAAGTTTAAAATAGGCGCAACGGGCGGTGCCCA
ACAGGCGGAGATCACCGCGCAGGCCAGCTTCGATATGCAAACCTCAACGG
GGTTTGCCGATTTCACGCACTTTGCCGACGAAGGCGCCGCGAACGTCGTG
GACGAGCAGCAGCTACACTCCTTGCCGCCGGCAGCACCACCGCCACAGGC
AGCAGTGGTGCCGCCCACAAGAATCACTCTTCAGCAGGCACAGCAGCGCG
TTTCTGCCTTCGAGGTTTACCGAAAGCCGCAAACGCCACGTGGATCGCAA
TCGCCGCCCCAGCAGCCGCCACCGCCGGCTCCAGCTGTTGGTTTGACCAC
CCAAACTGGTCAGCTGCCCAGTGCTGAGAGCTTTGAGAAGCGAGTAACCG
CCATCAGTGACTCGCTACGTCACGTGTCCTTCAAACAGGGTCAGGCCAAT
ACCACGGAAGTACTGCAACGGCTGCGGGAGCAGAACAACTCACTGCTCCA
CCTTTGCAACGATTTAAGTGACGAACTTCTGAGCGTCCAGACGCGCAAGG
AGGAGATGCGTCTCAAGCTGGAGGGACTTAATGCCAGTGATAGTACAGGG
CGAACGAGCTCCTCGATTTGCGCACCGGTGACAGCAAACGTGACCGGTGG
ATCCTCTGGTTCGGCAGGAGCTGCTTATACCAACGTTTAAAAGCTTTCTA
GACCAT

BS14816.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:42:36
Subject Length Description Subject Range Query Range Score Percent Strand
Reps-RA 2724 CG6192-PA 1..2724 17..2740 13620 100 Plus
Reps-RB 2637 CG6192-PB 1..2094 17..2110 10470 100 Plus
Reps-RB 2637 CG6192-PB 2095..2637 2198..2740 2715 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:42:37
Subject Length Description Subject Range Query Range Score Percent Strand
Reps-RA 4820 CG6192-RA 432..3156 16..2740 13625 100 Plus
Reps-RB 4733 CG6192-RB 432..2526 16..2110 10475 100 Plus
Reps-RB 4733 CG6192-RB 2527..3069 2198..2740 2715 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:42:34
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11104351..11105138 1674..887 3940 100 Minus
2L 23513712 2L 11102627..11103169 2740..2198 2715 100 Minus
2L 23513712 2L 11103844..11104281 2110..1673 2190 100 Minus
2L 23513712 2L 11105607..11106013 568..162 2035 100 Minus
2L 23513712 2L 11105205..11105525 888..568 1605 100 Minus
2L 23513712 2L 11106067..11106214 163..16 740 100 Minus
2L 23513712 2L 11103321..11103411 2199..2109 455 100 Minus
Blast to na_te.dros performed on 2014-11-28 01:42:35 has no hits.

BS14816.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:16:33 Download gff for BS14816.complete
Subject Subject Range Query Range Percent Splice Strand
CG6192-RA 1..2724 17..2740 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:40:40 Download gff for BS14816.complete
Subject Subject Range Query Range Percent Splice Strand
CG6192-RA 426..3147 17..2738 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:55:24 Download gff for BS14816.complete
Subject Subject Range Query Range Percent Splice Strand
Reps-RA 433..3154 17..2738 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:37:19 Download gff for BS14816.complete
Subject Subject Range Query Range Percent Splice Strand
CG6192-RA 426..3147 17..2738 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:54:59 Download gff for BS14816.complete
Subject Subject Range Query Range Percent Splice Strand
Reps-RA 433..3154 17..2738 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:54:59 Download gff for BS14816.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11102629..11103169 2198..2738 100 <- Minus
2L 11103323..11103409 2111..2197 100 <- Minus
2L 11103844..11104280 1674..2110 100 <- Minus
2L 11104352..11105136 889..1673 100 <- Minus
2L 11105205..11105524 569..888 100 <- Minus
2L 11105607..11106011 164..568 100 <- Minus
2L 11106067..11106213 17..163 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:55:24 Download gff for BS14816.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11102629..11103169 2198..2738 100 <- Minus
arm_2L 11103323..11103409 2111..2197 100 <- Minus
arm_2L 11103844..11104280 1674..2110 100 <- Minus
arm_2L 11104352..11105136 889..1673 100 <- Minus
arm_2L 11105205..11105524 569..888 100 <- Minus
arm_2L 11105607..11106011 164..568 100 <- Minus
arm_2L 11106067..11106213 17..163 100   Minus

BS14816.3prime Sequence

848 bp (765 high quality bases) assembled on 2006-10-13

> BS14816.3prime
ATGGTCTAGAAAGCTTTTAAACGTTGGTATAAGCAGCTCCTGCCGAACCA
GAGGATCCACCGGTCACGTTTGCTGTCACCGGTGCGCAAATCGAGGAGCT
CGTTCGCCCTGTACTATCACTGGCATTAAGTCCCTCCAGCTTGAGACGCA
TCTCCTCCTTGCGCGTCTGGACGCTCAGAAGTTCGTCACTTAAATCGTTG
CAAAGGTGGAGCAGTGAGTTGTTCTGCTCCCGCAGCCGTTGCAGTACTTC
CGTGGTATTGGCCTGACCCTGTTTGAAGGACACGTGACGTAGCGAGTCAC
TGATGGCGGTTACTCGCTTCTCAAAGCTCTCAGCACTGGGCAGCTGACCA
GTTTGGGTGGTCAAACCAACAGCTGGAGCCGGCGGTGGCGGCTGCTGGGG
CGGCGATTGCGATCCACGTGGCGTTTGCGGCTTTCGGTAAACCTCGAAGG
CAGAAACGCGCTGCTGTGCCTGCTGAAGAGTGATTCTTGTGGGCGGCACC
ACTGCTGCCTGTGGCGGTGGTGCTGCCGGCGGCAAGGAGTGTAGCTGCTG
CTCGTCCACGACGTTCGCGGCGCCTTCGTCGGCAAAGTGCGTGAAATCGG
CAAACCCCGTTGAGGTTTGCATATCGAAGCTGGCCTGCGCGGTGATCTCC
GCCTGTTGGGCACCGCCCGTTGCGCCTATTTTAAACTTGTTTAAGTCCAG
ACTGCTGCTCCGTGCATGACGATGTGGCCTTGGCGGTGGCAGAGGCGGTG
GCTCCTTCTTCGACGCCAAAGACGATGCCACGTAGGCAGCCTGCGGTTTC
TGCGACTCACTTGGCCCAGTGGATCCGATACTGGGCTCGCGTTGCGGT

BS14816.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:16:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG6192-PA 2724 CG6192-RA 1893..2724 848..17 4135 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:33:00
Subject Length Description Subject Range Query Range Score Percent Strand
Reps-RA 4820 CG6192-RA 2325..3156 848..17 4145 99.9 Minus
Reps-RB 4733 CG6192-RB 2527..3069 559..17 2715 100 Minus
Reps-RB 4733 CG6192-RB 2325..2526 848..647 995 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:32:52
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11102627..11103169 17..559 2715 100 Plus
2L 23513712 2L 11103844..11104045 647..848 995 99.5 Plus
2L 23513712 2L 11103321..11103411 558..648 455 100 Plus
Blast to na_te.dros performed on 2015-02-13 01:32:56 has no hits.

BS14816.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:44 Download gff for BS14816.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6192-PA 1893..2724 17..848 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 00:12:17 Download gff for BS14816.3prime
Subject Subject Range Query Range Percent Splice Strand
Reps-RA 2325..3158 13..848 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:08:16 Download gff for BS14816.3prime
Subject Subject Range Query Range Percent Splice Strand
Reps-RA 2325..3158 13..848 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:08:16 Download gff for BS14816.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 11102622..11103169 13..559 99 <- Plus
2L 11103323..11103409 560..646 100 <- Plus
2L 11103844..11104045 647..848 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 00:12:17 Download gff for BS14816.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11102622..11103169 13..559 99 <- Plus
arm_2L 11103323..11103409 560..646 100 <- Plus
arm_2L 11103844..11104045 647..848 99   Plus

BS14816.5prime Sequence

836 bp (834 high quality bases) assembled on 2006-10-13

> BS14816.5prime
GAAGTTATCAGTCGACATGGACGTGTCCCTCACTGAGCCGGAGACGCGCT
TCTACAGTGAGTTGTTCCAATGCTGCGACGTGGAGAAGACAGGCAAGGTG
CCCATGCTTAAGGCCACCGAGCTCTTTCGCTCGGCGGACATCGCCAATGA
GACCGTGATTGAGATCACCGGTCTGGCGGGGATACCCTCCACGGCGCTAC
ACATCTCGCGGACACAGTTCTACTCATGCCTGAAGCTAATCGCTGCTCAT
CAGGCGGCCATGCCCCTGCGCCAGGAGCTGATCTTGGCCACGTTTCCGCT
TCCATTACCGCACTTTAGCTGGAAGGAGGCGGTTACAGCTCCGGTGGCTG
TCGAAAATGGATTGACTGCCTTGCCACCGCCACCACCCACAGATCGCAGA
AATTCACTGCGTCGTAACTCGCAGCAAGAGCAGCTGCAAGACACCTCTGA
TGTGCCCAGCACCGACTCCGAGGTTGAGCAAAACGAATCAGTGGACGATG
CGACAGGCCATGGACGAGGTACGGATGGCTGTGGGGTCGTCAGCAGCAGC
AGCCGCGAAAATGTCGGGCGACGACGAGGAGGCGGTACTGGTGGTGGATC
GCCAGAAGCCTGGAGCACTAACAGTGACAGCCCCACGCCCACCAACAGCG
TGGCTGAGCGGCCTTGGGCGCAGGACACCCTCTGGCAGGGTTTGCTGGGC
GACGAGCATCGCCAGCTGCTAGGCACGGAGGAAGAGTCTTCCGATCGCCA
CAGCAGCGACGACGATGACAACGAGAGCGAATTGGTGACCATTTACCAGA
TAACCCCGGAACAGCGCGAGTACTATAATAAGCAGT

BS14816.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:16:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG6192-PA 2724 CG6192-RA 1..820 17..836 4100 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:53:03
Subject Length Description Subject Range Query Range Score Percent Strand
Reps-RB 4733 CG6192-RB 432..1252 16..836 4105 100 Plus
Reps-RA 4820 CG6192-RA 432..1252 16..836 4105 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:52:59
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11105607..11106013 568..162 2035 100 Minus
2L 23513712 2L 11105257..11105525 836..568 1345 100 Minus
2L 23513712 2L 11106067..11106214 163..16 740 100 Minus
Blast to na_te.dros performed on 2015-02-11 15:53:01 has no hits.

BS14816.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:45 Download gff for BS14816.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6192-PA 1..820 17..836 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 20:23:03 Download gff for BS14816.5prime
Subject Subject Range Query Range Percent Splice Strand
Reps-RA 428..1252 9..836 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:34:49 Download gff for BS14816.5prime
Subject Subject Range Query Range Percent Splice Strand
Reps-RA 428..1252 9..836 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:34:49 Download gff for BS14816.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 11105257..11105524 569..836 100 <- Minus
2L 11105607..11106011 164..568 100 <- Minus
2L 11106067..11106218 9..163 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 20:23:03 Download gff for BS14816.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11105257..11105524 569..836 100 <- Minus
arm_2L 11105607..11106011 164..568 100 <- Minus
arm_2L 11106067..11106218 9..163 98   Minus

BS14816.pep Sequence

Translation from 16 to 2739

> BS14816.pep
MDVSLTEPETRFYSELFQCCDVEKTGKVPMLKATELFRSADIANETVIEI
TGLAGIPSTALHISRTQFYSCLKLIAAHQAAMPLRQELILATFPLPLPHF
SWKEAVTAPVAVENGLTALPPPPPTDRRNSLRRNSQQEQLQDTSDVPSTD
SEVEQNESVDDATGHGRGTDGCGVVSSSSRENVGRRRGGGTGGGSPEAWS
TNSDSPTPTNSVAERPWAQDTLWQGLLGDEHRQLLGTEEESSDRHSSDDD
DNESELVTIYQITPEQREYYNKQFRTVQRDPHGLLSGQAARNFFEKSRIP
VEELRHIWQLCDVTRDGALSLSEFTAAMHLVVLRRNNIPLPTSLPHCLHP
NVLQAAASGSGQGVTSSSSAALPQEPPEADLLHLNDDDEDDHTDNTIIAG
NLSGSSTTSKPRPNVPSDKNIMNLSSISTSSQASNSSKREATPQNSLGKN
RSISNSPNVEKPVSGTVSSTASAVDSTNVSSQWTKFSESPTTSAVSVQST
TGAAPVVAAGAAASGASSPGLKPVLFDMKRSAQDVVSNPQILHPVPLRVT
PIGTAIASSAESSNENESAVAQREDSPKAISSTTVNNQSSAVVPGISGVA
GSSHRDSSDLRAIQRPQAKKLPAKNSALPPPPQREPSIGSTGPSESQEPQ
AAYVASSLASKKEPPPLPPPRPHRHARSSSLDLNKFKIGATGGAQQAEIT
AQASFDMQTSTGFADFTHFADEGAANVVDEQQLHSLPPAAPPPQAAVVPP
TRITLQQAQQRVSAFEVYRKPQTPRGSQSPPQQPPPPAPAVGLTTQTGQL
PSAESFEKRVTAISDSLRHVSFKQGQANTTEVLQRLREQNNSLLHLCNDL
SDELLSVQTRKEEMRLKLEGLNASDSTGRTSSSICAPVTANVTGGSSGSA
GAAYTNV*

BS14816.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:01:49
Subject Length Description Subject Range Query Range Score Percent Strand
Reps-PA 907 CG6192-PA 1..907 1..907 4634 100 Plus
Reps-PB 878 CG6192-PB 1..878 1..907 4446 96.8 Plus
Dap160-PH 1005 CG1099-PH 5..120 257..373 161 33.3 Plus
Dap160-PB 1014 CG1099-PB 5..120 257..373 161 33.3 Plus
Dap160-PG 1088 CG1099-PG 5..120 257..373 161 33.3 Plus