Clone Sequence Records
BS14822.complete Sequence
1877 bp assembled on 2009-12-07
GenBank Submission: KX806019
> BS14822.complete
GAAGTTATCAGTCGACATGGTGCAGTCGGGGATTTGGCGTTCGAAACCAA
TTCTCTGGCGGATAAGATTTTGCGCGGCGATATATTTTATTATTATTAGA
GCGCTGTGCAACACTGTCACAAAGCCGATAGCTTCGATAACGGCCGATAA
ACAGTTACGTAGCATCTCCACTTCGAACACCATGTCTTTCCGCCCATTGG
TCGAGGGCGACTGCGGTGGAGTTAATCCTCTCATGCAACTGGGCGGACAG
TTCACCCGCGATGTTGCCCACAAGGATGAGGGCTATGTGCAGCGACACTT
CGAGCGCGCTGCTCGTCCCGAGGACCAGTTGATCAACGAGTTCCTGGGAC
AGGTCACTGCCCCACCGCAGTCATTTCAGATGGACACTCTGCTCCAGGAG
ATGCGGGACATAAATATTCACGGAAATCCGCAGCAGCAGATGCACTCTCA
GCAGGCGGAGCAGTGGGGACAGGACTTTGCCCGCGGACTGGCACCCGCCC
TGCCCAACAAGATGATCCACATGCAGGCACAGCAGCAGGACCTGCAGCAT
GCCCAGGAGTTCTTCGACGAGCCCCTGATCAGTAGCCAGAACTTTCGGTC
CCTGCCGCCATTGCGTCAGCCTTTGATGCCCATTGCGGCAGGACAGCAAC
AGGACCCCTTCTTTGACTCCGCCATGGAAACTATAATCACAGATCATCTG
CCACAGGCGCCACAGGGGGAATCGCTGGACGACTGGATCAGCGACTACCA
GCGCAGCACCGAACAAAAAGAGCAAACCGCCGCCAACTTCAACGAAAAGT
TCTGGGAGCGGCTGCAAGACGAGTGGCAGAAGCTGGCCGACGAGAACGAG
CATCCGTGGCTGTCGGAGTACAACGACAATATGGACGCTTATAAGGAGTA
CGAGTTCGCCGAGGGCAACCCCATGTCTGATGTGGAGAACCCGTTTGAAA
AGGGTAAGGAGTACCTGTCCAAAGGGGATATACCCAGCGCAGTTCTATGT
TTCGAGGTGGCGGCCAAAAAGCAACCGGAGCGCGCTGAGGTCTGGCAGTT
GCTGGGCACTTCGCAGACAGAGAACGAAATGGATCCCCAGGCCATTGCGG
CACTTAAGCGGGCTTACGACTTGCAACCGGACAACCAACAGGTCCTGATG
GCCCTGGCCGCGTGCTACACCAACGAGGGCCTGCAGAACAACGCCGTGCG
CATGCTGTGCAACTGGCTGACAGTGCATCCCAAGTATCAGCACCTGGTCG
CAGCCCATCCGGAGCTGCAGGCCGAGGGCACTTCGTTGGCTTCGTCGCTG
ATTGGTCCGAGTAAGCTGCGCGATCTGCAGCAGATCTACTTGGAAGCCGT
TCGACAGCACCCTTCGGAGGTGGATGCCGAAGTCCAGGATGCCCTCGGCG
TGCTCTACAATCTATCTGGGGAGTTCGACAAGGCGGTGGACTGCTACCAG
TCCGCTCTGCAGGTGGATCCCCAAAATGCGAAGACATGGAACCGATTGGG
GGCCAGTTTGGCCAACGGCTCGCGCTCCGTGGAGGCGGTGGAGGCTTATC
AGCAGGCGCTGCAGCTCCAACCGGGCTTCATCCGTGTGCGTTACAACGTG
GGCGTATGTTGCATGAACCTTAAGGCCTACAAGGAAGCTGTGGAGCACTT
ACTCACAGCGCTTACCATGCAGGCTCACACTAACGCCGCCCGAGAGCTGC
CCAATGCGGCGATGGCGGCTACCTTTAGAGGACAGAACCAGATGTCCGAG
TCTATTTGGAGTACGCTGAAGATGGTCATTTCGCTGATGGGCCGCAGCGA
TCTCCAGAGTTATGTGAGCGATCGCAATCTGGCGGCTCTTAATGAGGCCT
TTAAGGATTAAAAGCTTTCTAGACCAT
BS14822.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:37:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pex5-RA | 1845 | CG14815-PA | 1..1845 | 17..1861 | 9225 | 100 | Plus |
| Pex5-RB | 1680 | CG14815-PB | 1..1680 | 182..1861 | 8400 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:37:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pex5-RA | 2158 | CG14815-RA | 137..1982 | 16..1861 | 9230 | 100 | Plus |
| Pex5-RB | 1972 | CG14815-RB | 87..1796 | 152..1861 | 8550 | 100 | Plus |
| CG14803-RB | 3404 | CG14803-RB | 1..56 | 71..16 | 280 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:37:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1867008..1868717 | 1861..152 | 8550 | 100 | Minus |
| X | 23542271 | X | 1868787..1868925 | 154..16 | 695 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:37:36 has no hits.
BS14822.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:16:34 Download gff for
BS14822.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14815-RA | 1..1845 | 17..1861 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:47:43 Download gff for
BS14822.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14815-RA | 128..1986 | 4..1865 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:53:05 Download gff for
BS14822.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex5-RA | 138..1980 | 17..1859 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:29:52 Download gff for
BS14822.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14815-RA | 138..1980 | 17..1859 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:53:04 Download gff for
BS14822.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex5-RA | 138..1980 | 17..1859 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:53:04 Download gff for
BS14822.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1867010..1868714 | 155..1859 | 100 | <- | Minus |
| X | 1868787..1868924 | 17..154 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:53:05 Download gff for
BS14822.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1761043..1762747 | 155..1859 | 100 | <- | Minus |
| arm_X | 1762820..1762957 | 17..154 | 100 | | Minus |
BS14822.3prime Sequence
863 bp (770 high quality bases) assembled on 2006-10-13
> BS14822.3prime
ATGGTCTAGAAAGCTTTTAATCCTTAAAGGCCTCATTAAGAGCCGCCAGA
TTGCGATCGCTCACATAACTCTGGAGATCGCTGCGGCCCATCAGCGAAAT
GACCATCTTCAGCGTACTCCAAATAGACTCGGACATCTGGTTCTGTCCTC
TAAAGGTAGCCGCCATCGCCGCATTGGGCAGCTCTCGGGCGGCGTTAGTG
TGAGCCTGCATGGTAAGCGCTGTGAGTAAGTGCTCCACAGCTTCCTTGTA
GGCCTTAAGGTTCATGCAACATACGCCCACGTTGTAACGCACACGGATGA
AGCCCGGTTGGAGCTGCAGCGCCTGCTGATAAGCCTCCACCGCCTCCACG
GAGCGCGAGCCGTTGGCCAAACTGGCCCCCAATCGGTTCCATGTCTTCGC
ATTTTGGGGATCCACCTGCAGAGCGGACTGGTAGCAGTCCACCGCCTTGT
CGAACTCCCCAGATAGATTGTAGAGCACGCCGAGGGCATCCTGGACTTCG
GCATCCACCTCCGAAGGGTGCTGTCGAACGGCTTCCAAGTAGATCTGCTG
CAGATCGCGCAGCTTACTCGGACCAATCAGCGACGAAGCCAACGAAGTGC
CCTCGGCCTGCAGCTCCGGATGGGCTGCGACCAGGTGCTGATACTTGGGA
TGCACTGTCAGCCAGTTGCACAGCATGCGCACGGCGTTGTTCTGCAGGCC
CTCGTTGGTGTAGCACGCGGCCAGGGCCATCAGGACCTGTTGGTTGTCCG
GTTGCAAGTCGTAAGCCCGCTTAAGTGCCGCAATGGCCTGGGGATCCATT
TCGTTCTCTGTCTGCGAAGTGCCCAACAACTGCCAGACCTCAGCGCGCTC
CGGTTGCTTTTTT
BS14822.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:16:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14815-PA | 1845 | CG14815-RA | 1000..1845 | 862..17 | 4205 | 99.8 | Minus |
| CG14815-PB | 1680 | CG14815-RB | 835..1680 | 862..17 | 4205 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:53:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pex5-RB | 1972 | CG14815-RB | 951..1796 | 862..17 | 4215 | 99.9 | Minus |
| Pex5-RA | 2158 | CG14815-RA | 1137..1982 | 862..17 | 4215 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:53:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1867008..1867853 | 17..862 | 4215 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-12 04:53:44 has no hits.
BS14822.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:48 Download gff for
BS14822.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14815-PB | 834..1680 | 17..863 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 07:18:54 Download gff for
BS14822.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex5-RA | 1136..1986 | 13..863 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:29:46 Download gff for
BS14822.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex5-RA | 1136..1986 | 13..863 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:29:46 Download gff for
BS14822.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1867004..1867853 | 13..863 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 07:18:54 Download gff for
BS14822.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1761037..1761886 | 13..863 | 99 | | Plus |
BS14822.5prime Sequence
787 bp (709 high quality bases) assembled on 2006-10-13
> BS14822.5prime
GAAGTTATCAGTCGACATGGTGCAGTCGGGGATTTGGCGTTCGAAACCAA
TTCTCTGGCGGATAAGATTTTGCGCGGCGATATATTTTATTATTATTAGA
GCGCTGTGCAACACTGTCACAAAGCCGATAGCTTCGATAACGGCCGATAA
ACAGTTACGTAGCATCTCCACTTCGAACACCATGTCTTTCCGCCCATTGG
TCGAGGGCGACTGCGGTGGAGTTAATCCTCTCATGCAACTGGGCGGACAG
TTCACCCGCGATGTTGCCCACAAGGATGAGGGCTATGTGCAGCGACACTT
CGAGCGCGCTGCTCGTCCCGAGGACCAGTTGATCAACGAGTTCCTGGGAC
AGGTCACTGCCCCACCGCAGTCATTTCAGATGGACACTCTGCTCCAGGAG
ATGCGGGACATAAATATTCACGGAAATCCGCAGCAGCAGATGCACTCTCA
GCAGGCGGAGCAGTGGGGACAGGACTTTGCCCGCGGACTGGCACCCGCCC
TGCCCAACAAGATGATCCACATGCAGGCACAGCAGCAGGACCTGCAGCAT
GCCCAGGAGTTCTTCGACGAGCCCCTGATCAGTAGCCAGAACTTTCGGTC
CCTGCCGCCATTGCGTCAGCCTTTGATGCCCATTGCGGCAGGACAGCAAC
AGGACCCCTTCTTTGACTCCGCCATGGAAACTATAATCACAGATCATCTG
CCACAGGCGCCACAGGGGGAATCGCTGGACGACTGGATCACCGACTACCA
GCGCAGCACCGAACAAAAAGAGCAAACCGCCGCCAAC
BS14822.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:17:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14815-PA | 1845 | CG14815-RA | 1..771 | 17..787 | 3830 | 99.8 | Plus |
| CG14815-PB | 1680 | CG14815-RB | 1..606 | 182..787 | 3005 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:02:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pex5-RA | 2158 | CG14815-RA | 137..908 | 16..787 | 3845 | 99.9 | Plus |
| Pex5-RB | 1972 | CG14815-RB | 87..722 | 152..787 | 3165 | 99.8 | Plus |
| CG14803-RB | 3404 | CG14803-RB | 1..56 | 71..16 | 280 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:02:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1868082..1868717 | 787..152 | 3165 | 99.8 | Minus |
| X | 23542271 | X | 1868787..1868925 | 154..16 | 695 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 13:02:38 has no hits.
BS14822.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:49 Download gff for
BS14822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14815-PA | 1..771 | 17..787 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:52:25 Download gff for
BS14822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex5-RA | 128..908 | 4..787 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:32:11 Download gff for
BS14822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex5-RA | 128..908 | 4..787 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 15:32:11 Download gff for
BS14822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1868082..1868714 | 155..787 | 99 | <- | Minus |
| X | 1868787..1868934 | 4..154 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:52:25 Download gff for
BS14822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1762115..1762747 | 155..787 | 99 | <- | Minus |
| arm_X | 1762820..1762967 | 4..154 | 96 | | Minus |
BS14822.pep Sequence
Translation from 16 to 1860
> BS14822.pep
MVQSGIWRSKPILWRIRFCAAIYFIIIRALCNTVTKPIASITADKQLRSI
STSNTMSFRPLVEGDCGGVNPLMQLGGQFTRDVAHKDEGYVQRHFERAAR
PEDQLINEFLGQVTAPPQSFQMDTLLQEMRDINIHGNPQQQMHSQQAEQW
GQDFARGLAPALPNKMIHMQAQQQDLQHAQEFFDEPLISSQNFRSLPPLR
QPLMPIAAGQQQDPFFDSAMETIITDHLPQAPQGESLDDWISDYQRSTEQ
KEQTAANFNEKFWERLQDEWQKLADENEHPWLSEYNDNMDAYKEYEFAEG
NPMSDVENPFEKGKEYLSKGDIPSAVLCFEVAAKKQPERAEVWQLLGTSQ
TENEMDPQAIAALKRAYDLQPDNQQVLMALAACYTNEGLQNNAVRMLCNW
LTVHPKYQHLVAAHPELQAEGTSLASSLIGPSKLRDLQQIYLEAVRQHPS
EVDAEVQDALGVLYNLSGEFDKAVDCYQSALQVDPQNAKTWNRLGASLAN
GSRSVEAVEAYQQALQLQPGFIRVRYNVGVCCMNLKAYKEAVEHLLTALT
MQAHTNAARELPNAAMAATFRGQNQMSESIWSTLKMVISLMGRSDLQSYV
SDRNLAALNEAFKD*
BS14822.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:01:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pex5-PA | 614 | CG14815-PA | 1..614 | 1..614 | 3213 | 100 | Plus |
| Pex5-PB | 559 | CG14815-PB | 1..559 | 56..614 | 2932 | 100 | Plus |
| sxc-PB | 1059 | CG10392-PB | 227..465 | 313..558 | 167 | 24.7 | Plus |
| sxc-PA | 1059 | CG10392-PA | 227..465 | 313..558 | 167 | 24.7 | Plus |
| sxc-PC | 1059 | CG10392-PC | 227..465 | 313..558 | 167 | 24.7 | Plus |
