Clone Sequence Records
BS14825.complete Sequence
2003 bp assembled on 2009-12-07
GenBank Submission: KX802597
> BS14825.complete
GAAGTTATCAGTCGACATGGAAGTGACCTTCAAGAAGGCCCGACTGGGAA
AGGAGAGACTGGTGGAACAATCGGAGGAGGAGGAACGCGATGAGGGCTCC
TCTGGCCAAGATTTGTTTGGGTGGTGGGCCCTGCCGGAGCCAGCGCTCTT
GATGATCTTTGAGCGCCTGAGTGTGCCCGATCTGCTGAGGGCGAGTCGCT
GCTGTGTGCGGTGGCACAGCATCGCCAAGGACGACTTATTGTGGCGCCAC
AAGTTCCAGGAGCACTTCAAAGCCTCTCCGAGCATTCCGCTCAAGCCGGG
GTCCGAAAGCTGGCGAGCGGAGTACAAGCGCCTGTCCATGCACATACCCT
TTGTCCAGGCACAGCGACTGGAGCCCACTGTGGAGAACAACCACGGCCAC
ACGCACCAAGTGCTGCATGTAAGCTTTGCCCACAACGGGGAAATGTTTGC
CACCTGCTCCAAGGACGGATATGTGATAATCTGGAACGCCCAGCATCCGT
GTTCGGAGAAGTATGCGCACAACATGAAGCAGTTCAGCTGGAAGTACTCC
CAATACTCGCAGTTCAATCAAAGCGACACCTTGCTTCTCGTCTCCGGTGT
TCACTTTGGTTCGCCCCAATCCACTTCCGGGGAGATTGCTGTATTCTATT
TGGGAGCAACAGAGTCACACCTACGCTGCCGGGTGGTAAATCGTCCGTAT
GACATCTTTGGCACCTGGTTCAGTGACCAATATCTGATCTCAGGCGACCT
GCACTGGCTGGCGCACTTGGTGAGCACCTCGGTTCTGTGGCTGAACAAGG
CCAACCAAGAAATTGACTCGGAGCATGTGCCGATCATGAGCCAGCTATAT
AAGTTTTACAACCGAAATGCTAGTTCGGTTCGAGCTATAATGGTGGCCAG
GTGTCCATGGCTGGACGAGAGTAACGATCCCCTGGCCACTACTGCCGACC
AAGAAAGTCACAGCTCAGTGCTCTCGCCACCCACTGGAGATCAGGGATCT
ACCTCGCAGGCCAGTGGCAATCCAGTGTCCCACGCTGCCAGCATACTACG
CACAAGAAGCTCAACACCCGAAGAAAACTACTTGCCGGACATCAGTGAGC
GCCGTTCTAGAGCGAGACTCGGCGATGCCACCATTCACTACTTAGATGAA
TACAGGACAGCAGTGGCCACCACTAATGAATCGAACGATGACGACGACGA
GGAGTACGACTCTATGGACGTACAAGAGGAATACGACGAAATGGAGAACA
GTATACCCAAATATCTAATTTTTTCAACGGGCTCCACCACCTTCACGCCT
CACCAAATTGGATTCAAGCGCATACGCAACGTGTTCTTTCCCAAAAAGCT
TGATCCTGGGCCAAGTCTTAAAGAAAGAATAGCTGCAAAGCGCGCTGCCG
AACAGCAACAGCAGCAGACCCCGCGGACTGATCCAGACTGGTGGGATTAT
GAGTCAGTCAAGGATAGATTCGACAAGGTGGACAAGGTAATTGACTTGCA
CGGACATATTATTGGCATGGCACTGAGCCCGGACCACCGCTACTTGTACG
TCAACACACGTCCCTGGCCAAAGAACTACGTGATCACCAACCCTCTGGAG
CCGCCACCAATTGCTCAAGAGATTGACATCCACGTAATTGACCTAATGAC
TCTCAAGCGGGTGGGCAACATGCTGCGCGCCCACAAGGCCTACACTCCCA
GCGCGGAGTGCTTCTTTATCTTCCTTGATGTTTGCGAGGAGTACGTGGCC
AGTGGAGCGGAAGATCAACATGCCTACCTGTGGGATAGGTACTACGGCAT
CAGCCTAGCAAAGTTTAAGCACTCGGATGTGGTTAACAGTGTGGCCTTCA
ATCCTCGCGACTCGGAGATGCTGGTCACCACCAGCGACGACTACACAATT
AAGGTCTGGCGATCACGAGCAAAGGCAAAGGAGTTCAATATCCCCATTAA
CGTCAGCGAATCCTTTGAGTTGAAGCCGAAAAACTAAAAGCTTTCTAGAC
CAT
BS14825.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:38:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fbw5-RA | 1971 | CG9144-PA | 1..1971 | 17..1987 | 9855 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:38:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fbw5-RA | 2285 | CG9144-RA | 188..2159 | 16..1987 | 9860 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:38:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6063824..6065250 | 1905..479 | 7135 | 100 | Minus |
| 2L | 23513712 | 2L | 6065304..6065766 | 478..16 | 2315 | 100 | Minus |
| 2L | 23513712 | 2L | 6063688..6063773 | 1987..1902 | 430 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 01:38:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Juan | 4236 | Juan JUAN 4236bp | 3627..3658 | 1278..1247 | 115 | 84.4 | Minus |
BS14825.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:16:35 Download gff for
BS14825.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9144-RA | 1..1971 | 17..1987 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:40:05 Download gff for
BS14825.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9144-RA | 185..2146 | 17..1978 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:53:29 Download gff for
BS14825.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbw5-RA | 189..2150 | 17..1978 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:42:11 Download gff for
BS14825.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9144-RA | 185..2146 | 17..1978 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:53:23 Download gff for
BS14825.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbw5-RA | 189..2150 | 17..1978 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:53:23 Download gff for
BS14825.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6063697..6063771 | 1904..1978 | 100 | <- | Minus |
| 2L | 6063826..6065250 | 479..1903 | 100 | <- | Minus |
| 2L | 6065304..6065765 | 17..478 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:53:29 Download gff for
BS14825.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6063697..6063771 | 1904..1978 | 100 | <- | Minus |
| arm_2L | 6063826..6065250 | 479..1903 | 100 | <- | Minus |
| arm_2L | 6065304..6065765 | 17..478 | 100 | | Minus |
BS14825.3prime Sequence
785 bp (698 high quality bases) assembled on 2006-10-13
> BS14825.3prime
ATGGTCTAGAAAGCTTTTAGTTTTTCGGCTTCAACTCAAAGGATTCGCTG
ACGTTAATGGGGATATTGAACTCCTTTGCCTTTGCTCGTGATCGCCAGAC
CTTAATTGTGTAGTCGTCGCTGGTGGTGACCAGCATCTCCGAGTCGCGAG
GATTGAAGGCCACACTGTTAACCACATCCGAGTGCTTAAACTTTGCTAGG
CTGATGCCGTAGTACCTATCCCACAGGTAGGCATGTTGATCTTCCGCTCC
ACTGGCCACGTACTCCTCGCAAACATCAAGGAAGATAAAGAAGCACTCCG
CGCTGGGAGTGTAGGCCTTGTGGGCGCGCAGCATGTTGCCCACCCGCTTG
AGAGTCATTAGGTCAATTACGTGGATGTCAATCTCTTGAGCAATTGGTGG
CGGCTCCAGAGGGTTGGTGATCACGTAGTTCTTTGGCCAGGGACGTGTGT
TGACGTACAAGTAGCGGTGGTCCGGGCTCAGTGCCATGCCAATAATATGT
CCGTGCAAGTCAATTACCTTGTCCACCTTGTCGAATCTATCCTTGACTGA
CTCATAATCCCACCAGTCTGGATCAGTCCGCGGGGTCTGCTGCTGTTGCT
GTTCGGCAGCGCGCTTTGCAGCTATTCTTTCTTTAAGACTTGGCCCAGGA
TCAAGCTTTTTGGGAAAGAACACGTTGCGTATGCGCTTGAATCCAATTTG
GTGAGGCGTGAAGGTGGTGGAGCCCGTTGAAAAAATTAGATATTTGGGTA
TACTGTTCTCCATTTCGTCGTATTCCTCTTGTACG
BS14825.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:17:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9144-PA | 1971 | CG9144-RA | 1203..1971 | 785..17 | 3845 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:33:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fbw5-RA | 2285 | CG9144-RA | 1391..2159 | 785..17 | 3845 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:32:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6063824..6064510 | 99..785 | 3435 | 100 | Plus |
| 2L | 23513712 | 2L | 6063688..6063773 | 17..102 | 430 | 100 | Plus |
Blast to na_te.dros performed 2015-02-10 15:33:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Juan | 4236 | Juan JUAN 4236bp | 3627..3658 | 726..757 | 115 | 84.4 | Plus |
BS14825.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:50 Download gff for
BS14825.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9144-PA | 1203..1971 | 17..785 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 06:54:37 Download gff for
BS14825.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbw5-RA | 1391..2159 | 17..785 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:25:43 Download gff for
BS14825.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbw5-RA | 1391..2159 | 17..785 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:25:43 Download gff for
BS14825.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6063688..6063771 | 17..100 | 100 | <- | Plus |
| 2L | 6063826..6064510 | 101..785 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 06:54:37 Download gff for
BS14825.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6063688..6063771 | 17..100 | 100 | <- | Plus |
| arm_2L | 6063826..6064510 | 101..785 | 100 | | Plus |
BS14825.5prime Sequence
814 bp (741 high quality bases) assembled on 2006-10-13
> BS14825.5prime
GAAGTTATCAGTCGACATGGAAGTGACCTTCAAGAAGGCCCGACTGGGAA
AGGAGAGACTGGTGGAACAATCGGAGGAGGAGGAACGCGATGAGGGCTCC
TCTGGCCAAGATTTGTTTGGGTGGTGGGCCCTGCCGGAGCCAGCGCTCTT
GATGATCTTTGAGCGCCTGAGTGTGCCCGATCTGCTGAGGGCGAGTCGCT
GCTGTGTGCGGTGGCACAGCATCGCCAAGGACGACTTATTGTGGCGCCAC
AAGTTCCAGGAGCACTTCAAAGCCTCTCCGAGCATTCCGCTCAAGCCGGG
GTCCGAAAGCTGGCGAGCGGAGTACAAGCGCCTGTCCATGCACATACCCT
TTGTCCAGGCACAGCGACTGGAGCCCACTGTGGAGAACAACCACGGCCAC
ACGCACCAAGTGCTGCATGTAAGCTTTGCCCACAACGGGGAAATGTTTGC
CACCTGCTCCAAGGACGGATATGTGATAATCTGGAACGCCCAGCATCCGT
GTTCGGAGAAGTATGCGCACAACATGAAGCAGTTCAGCTGGAAGTACTCC
CAATACTCGCAGTTCAATCAAAGCGACACCTTGCTTCTCGTCTCCGGTGT
TCACTTTGGTTCGCCCCAATCCACTTCCGGGGAGATTGCTGTATTCTATT
TGGGAGCAACAGAGTCACACCTACGCTGCCGGGTGGTAAATCGTCCGTAT
GACATCTTTGGCACCTGGTTCAGTGACCAATATCTGATCTCAGGCGACCT
GCACTGGCTGGCGCACTTGGTGAGCACCTCGGTTCTGTGGCTGAACAAGG
CCAACCAAGAAATT
BS14825.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:17:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9144-PA | 1971 | CG9144-RA | 1..798 | 17..814 | 3990 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-05 02:26:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fbw5-RA | 2285 | CG9144-RA | 188..986 | 16..814 | 3995 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-05 02:26:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6065304..6065766 | 478..16 | 2315 | 100 | Minus |
| 2L | 23513712 | 2L | 6064915..6065250 | 814..479 | 1680 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-05 02:26:35 has no hits.
BS14825.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:50 Download gff for
BS14825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9144-PA | 1..798 | 17..814 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 22:12:01 Download gff for
BS14825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbw5-RA | 184..986 | 12..814 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-05 03:05:49 Download gff for
BS14825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbw5-RA | 184..986 | 12..814 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-05 03:05:49 Download gff for
BS14825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6064915..6065250 | 479..814 | 100 | <- | Minus |
| 2L | 6065304..6065770 | 12..478 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 22:12:01 Download gff for
BS14825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6064915..6065250 | 479..814 | 100 | <- | Minus |
| arm_2L | 6065304..6065770 | 12..478 | 99 | | Minus |
BS14825.pep Sequence
Translation from 16 to 1986
> BS14825.pep
MEVTFKKARLGKERLVEQSEEEERDEGSSGQDLFGWWALPEPALLMIFER
LSVPDLLRASRCCVRWHSIAKDDLLWRHKFQEHFKASPSIPLKPGSESWR
AEYKRLSMHIPFVQAQRLEPTVENNHGHTHQVLHVSFAHNGEMFATCSKD
GYVIIWNAQHPCSEKYAHNMKQFSWKYSQYSQFNQSDTLLLVSGVHFGSP
QSTSGEIAVFYLGATESHLRCRVVNRPYDIFGTWFSDQYLISGDLHWLAH
LVSTSVLWLNKANQEIDSEHVPIMSQLYKFYNRNASSVRAIMVARCPWLD
ESNDPLATTADQESHSSVLSPPTGDQGSTSQASGNPVSHAASILRTRSST
PEENYLPDISERRSRARLGDATIHYLDEYRTAVATTNESNDDDDEEYDSM
DVQEEYDEMENSIPKYLIFSTGSTTFTPHQIGFKRIRNVFFPKKLDPGPS
LKERIAAKRAAEQQQQQTPRTDPDWWDYESVKDRFDKVDKVIDLHGHIIG
MALSPDHRYLYVNTRPWPKNYVITNPLEPPPIAQEIDIHVIDLMTLKRVG
NMLRAHKAYTPSAECFFIFLDVCEEYVASGAEDQHAYLWDRYYGISLAKF
KHSDVVNSVAFNPRDSEMLVTTSDDYTIKVWRSRAKAKEFNIPINVSESF
ELKPKN*
BS14825.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:01:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fbw5-PA | 656 | CG9144-PA | 1..656 | 1..656 | 3511 | 100 | Plus |
