Clone BS14826 Report

Search the DGRC for BS14826

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:148
Well:26
Vector:pDNR-Dual
Associated Gene/TranscriptCG3823-RA
Protein status:BS14826.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14826.3prime Sequence

848 bp (786 high quality bases) assembled on 2006-10-13

> BS14826.3prime
ATGGTCTAGAAAGCTTCTAATCAATTTCGAGGGAACGTAGACCTTCTGTG
ACTCCGGAATCACTTGACTTTCGTTGGCCATTCTTTTTGATTTTGTTTAT
TTGCCAGTTTTCCGTATCCATCAGATAATCCCTCTGCTCCTTGAGCAACT
GCATCCACTGGAGCTTCAGGTCGGACATCTTGCCCGCCTCCCCGCCGTAT
TCCTCCGGCAACATGGATCGCGGGAAGTGCCGATATGGAGTGTCCGCATT
TGGCAAATGGAAATGGATTAGCTTGAACACCTCTCCCTTGATGAACGGCT
TGACCACGGCCATCACCTTGTCCACATACGACGGGCAGTTGAGCACGTGG
ATCTCCTTGAGCCGTACGGGATGTGCCTCCTGGACGAACTTCATGTAGAC
ACGCAGGGCGCCCAGTGCGGTTTTGGTCAGGTGGCGCAGCGTATAGCCAG
CCATGTCGAAAACTGGTATCTCGCCGTCCGACAAACGCTCCTCGTTCTCC
GTCGCAAATCGACAGTCGGCCACCATGAAAAAGACCTTGATGGCAGCCGT
AAAGTTGAACTTGTCCGCATCGAAGTCGATGAGGCGGTAAAAGAGCAGCT
TGTTGTTCTCCGGGGTCAAGCCGGGCAACGGCACCAGATCTGCGACTTGC
AGTAGCTGCTGGGAACTGGCATCCAACGGATCGCGATCGATGAAGATGTG
TGCATGTTTGTTACGCAGTCCGTAATTCAGTTCCAAGAGTCGCTGGGCGG
CGGATAGATCACCCCGCGTCGTGTGCAGAAAGCGGCGCAGAAGCAATCGG
GATATATTTTGCGGCAACTGTGGCTGCGCCTGCACCCAATCCTGCAAA

BS14826.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG3823-PA 888 CG3823-RA 57..888 848..17 4135 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:51:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG3823-RA 1282 CG3823-RA 203..1034 848..17 4145 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:51:10
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6305864..6306294 561..131 2155 100 Minus
X 23542271 X 6304717..6304876 801..642 800 100 Minus
X 23542271 X 6306381..6306497 133..17 585 100 Minus
X 23542271 X 6305684..6305765 641..560 410 100 Minus
X 23542271 X 6304177..6304223 848..802 220 97.9 Minus
Blast to na_te.dros performed on 2015-02-03 06:51:14 has no hits.

BS14826.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:50 Download gff for BS14826.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3823-PA 60..888 17..845 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:32:27 Download gff for BS14826.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3823-RA 206..1038 13..845 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:40:02 Download gff for BS14826.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3823-RA 206..1038 13..845 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:40:02 Download gff for BS14826.3prime
Subject Subject Range Query Range Percent Splice Strand
X 6304180..6304223 802..845 97 -> Minus
X 6304717..6304876 642..801 100 -> Minus
X 6305684..6305765 560..641 100 -> Minus
X 6305866..6306293 132..559 100 -> Minus
X 6306383..6306501 13..131 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:32:27 Download gff for BS14826.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 6198213..6198256 802..845 97 -> Minus
arm_X 6198750..6198909 642..801 100 -> Minus
arm_X 6199717..6199798 560..641 100 -> Minus
arm_X 6199899..6200326 132..559 100 -> Minus
arm_X 6200416..6200534 13..131 98   Minus

BS14826.5prime Sequence

889 bp (817 high quality bases) assembled on 2006-10-13

> BS14826.5prime
GAAGTTATCAGTCGACATGGTCCACCTAAATGAGAAAGCGGAGGATCAGC
TGATGACCACAAGGATTTCGGATTTGCAGGATTGGCTGCAGGCGCAGCCA
CAGTTGCCGCAAAATATATCCCGATTGCTTCTGCGCCGCTTTCTGCACAC
GACGCGGGGTGATCTATCCGCCGCCCAGCGACTCTTGGAACTGAATTACG
GACTGCGTAACAAACATGCACACATCTTCATCGATCGCGATCCGTTGGAT
GCCAGTTCCCAGCAGCTACTGCAAGTCGCAGATCTGGTGCCGTTGCCCGG
CTTGACCCCGGAGAACAACAAGCTGCTCTTTTACCGCCTCATCGACTTCG
ATGCGGACAAGTTCAACTTTACGGCTGCCATCAAGGTCTTTTTCATGGTG
GCCGACTGTCGATTTGCGACGGAGAACGAGGAGCGTTTGTCGGACGGCGA
GATACCAGTTTTCGACATGGCTGGCTATACGCTGCGCCACCTGACCAAAA
CCGCACTGGGCGCCCTGCGTGTCTACATGAAGTTCGTCCAGGAGGCACAT
CCCGTACGGCTCAAGGAGATCCACGTGCTCAACTGCCCGTCGTATGTGGA
CAAGGTGATGGCCGTGGTCAAGCCGTTCATCAAGGGAGAGGTGTTCAAGC
TAATCCATTTCCATTTGCCAAATGCGGACACTCCATATCGGCACTTCCCG
CGATCCATGTTGCCGGAGGAATACGGCGGGGAGGCGGGCAAGATGTCCGA
CCTGAAGCTCCAGTGGATGCAGTTGCTCAAGGAGCAGAGGGATTATCTGA
TGGATACGGAAAACTGGCAAATAAACAAAATCAAAAAGAATGGCCAACGA
AAGTCAAGTGATTCCCGAGTCACAGAAGGTCTACGTTCC

BS14826.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG3823-PA 888 CG3823-RA 1..873 17..889 4340 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 10:37:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG3823-RA 1282 CG3823-RA 142..1019 12..889 4360 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 10:37:10
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6305864..6306294 360..790 2155 100 Plus
X 23542271 X 6304717..6304876 120..279 800 100 Plus
X 23542271 X 6304116..6304223 12..119 525 99.1 Plus
X 23542271 X 6306381..6306482 788..889 495 99 Plus
X 23542271 X 6305684..6305765 280..361 410 100 Plus
Blast to na_te.dros performed on 2015-02-06 10:37:14 has no hits.

BS14826.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:51 Download gff for BS14826.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3823-PA 1..873 17..889 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:43:32 Download gff for BS14826.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3823-RA 142..1019 12..889 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:27:48 Download gff for BS14826.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3823-RA 142..1019 12..889 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:27:48 Download gff for BS14826.5prime
Subject Subject Range Query Range Percent Splice Strand
X 6306383..6306482 790..889 99   Plus
X 6305866..6306293 362..789 100 -> Plus
X 6304116..6304223 12..119 99 -> Plus
X 6304717..6304876 120..279 100 -> Plus
X 6305684..6305765 280..361 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:43:32 Download gff for BS14826.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 6198149..6198256 12..119 99 -> Plus
arm_X 6198750..6198909 120..279 100 -> Plus
arm_X 6199717..6199798 280..361 100 -> Plus
arm_X 6199899..6200326 362..789 100 -> Plus
arm_X 6200416..6200515 790..889 99   Plus

BS14826.complete Sequence

920 bp assembled on 2006-11-01

GenBank Submission: FJ637795

> BS14826.complete
GAAGTTATCAGTCGACATGGTCCACCTAAATGAGAAAGCGGAGGATCAGC
TGATGACCACAAGGATTTCGGATTTGCAGGATTGGCTGCAGGCGCAGCCA
CAGTTGCCGCAAAATATATCCCGATTGCTTCTGCGCCGCTTTCTGCACAC
GACGCGGGGTGATCTATCCGCCGCCCAGCGACTCTTGGAACTGAATTACG
GACTGCGTAACAAACATGCACACATCTTCATCGATCGCGATCCGTTGGAT
GCCAGTTCCCAGCAGCTACTGCAAGTCGCAGATCTGGTGCCGTTGCCCGG
CTTGACCCCGGAGAACAACAAGCTGCTCTTTTACCGCCTCATCGACTTCG
ATGCGGACAAGTTCAACTTTACGGCTGCCATCAAGGTCTTTTTCATGGTG
GCCGACTGTCGATTTGCGACGGAGAACGAGGAGCGTTTGTCGGACGGCGA
GATACCAGTTTTCGACATGGCTGGCTATACGCTGCGCCACCTGACCAAAA
CCGCACTGGGCGCCCTGCGTGTCTACATGAAGTTCGTCCAGGAGGCACAT
CCCGTACGGCTCAAGGAGATCCACGTGCTCAACTGCCCGTCGTATGTGGA
CAAGGTGATGGCCGTGGTCAAGCCGTTCATCAAGGGAGAGGTGTTCAAGC
TAATCCATTTCCATTTGCCAAATGCGGACACTCCATATCGGCACTTCCCG
CGATCCATGTTGCCGGAGGAATACGGCGGGGAGGCGGGCAAGATGTCCGA
CCTGAAGCTCCAGTGGATGCAGTTGCTCAAGGAGCAGAGGGATTATCTGA
TGGATACGGAAAACTGGCAAATAAACAAAATCAAAAAGAATGGCCAACGA
AAGTCAAGTGATTCCGGAGTCACAGAAGGTCTACGTTCCCTCGAAATTGA
TTAGAAGCTTTCTAGACCAT

BS14826.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:54:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG3823-RA 888 CG3823-PA 1..888 17..904 4440 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:54:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG3823-RA 1282 CG3823-RA 142..1034 12..904 4450 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:54:19
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6305864..6306294 360..790 2155 100 Plus
X 23542271 X 6304717..6304876 120..279 800 100 Plus
X 23542271 X 6306381..6306497 788..904 585 100 Plus
X 23542271 X 6304116..6304223 12..119 525 99.1 Plus
X 23542271 X 6305684..6305765 280..361 410 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:54:20 has no hits.

BS14826.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:34:49 Download gff for BS14826.complete
Subject Subject Range Query Range Percent Splice Strand
CG3823-RA 1..888 17..904 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:07:38 Download gff for BS14826.complete
Subject Subject Range Query Range Percent Splice Strand
CG3823-RA 127..1023 12..908 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:33:57 Download gff for BS14826.complete
Subject Subject Range Query Range Percent Splice Strand
CG3823-RA 147..1034 17..904 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:34:49 Download gff for BS14826.complete
Subject Subject Range Query Range Percent Splice Strand
CG3823-RA 127..1023 12..908 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:40:13 Download gff for BS14826.complete
Subject Subject Range Query Range Percent Splice Strand
CG3823-RA 147..1034 17..904 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:40:13 Download gff for BS14826.complete
Subject Subject Range Query Range Percent Splice Strand
X 6304121..6304223 17..119 100 -> Plus
X 6304717..6304876 120..279 100 -> Plus
X 6305684..6305765 280..361 100 -> Plus
X 6305866..6306293 362..789 100 -> Plus
X 6306383..6306497 790..904 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:33:57 Download gff for BS14826.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6198154..6198256 17..119 100 -> Plus
arm_X 6198750..6198909 120..279 100 -> Plus
arm_X 6199717..6199798 280..361 100 -> Plus
arm_X 6199899..6200326 362..789 100 -> Plus
arm_X 6200416..6200530 790..904 100   Plus

BS14826.pep Sequence

Translation from 16 to 903

> BS14826.pep
MVHLNEKAEDQLMTTRISDLQDWLQAQPQLPQNISRLLLRRFLHTTRGDL
SAAQRLLELNYGLRNKHAHIFIDRDPLDASSQQLLQVADLVPLPGLTPEN
NKLLFYRLIDFDADKFNFTAAIKVFFMVADCRFATENEERLSDGEIPVFD
MAGYTLRHLTKTALGALRVYMKFVQEAHPVRLKEIHVLNCPSYVDKVMAV
VKPFIKGEVFKLIHFHLPNADTPYRHFPRSMLPEEYGGEAGKMSDLKLQW
MQLLKEQRDYLMDTENWQINKIKKNGQRKSSDSGVTEGLRSLEID*

BS14826.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:12:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG3823-PA 295 CG3823-PA 1..295 1..295 1536 100 Plus
CG3191-PC 309 CG3191-PC 38..302 17..277 684 46.8 Plus
CG3191-PA 309 CG3191-PA 38..302 17..277 684 46.8 Plus
CG3091-PC 303 CG3091-PC 25..292 16..269 589 39.9 Plus
CG3091-PA 303 CG3091-PA 25..292 16..269 589 39.9 Plus