Clone BS14831 Report

Search the DGRC for BS14831

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:148
Well:31
Vector:pDNR-Dual
Associated Gene/TranscriptCG11404-RA
Protein status:BS14831.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14831.3prime Sequence

600 bp (494 high quality bases) assembled on 2006-10-13

> BS14831.3prime
ATGGTCTAGAAAGCTTTTAGATCTTAATGGTCTGGGCCATTGCCATTCGT
TCCTGAATTTCCTCTGCGGGATGTGGCTGCTGCTCTGGGAGAGCCTCGGA
CTGGATCCGAGGTTTGGGATCTCCGTCGATCTGCATCTGATACATAACGG
TTGCTATAATCAGACTAAAGTGCAGCATGGTCAACAGGAATCCGAAAAGG
ACAAGAGAAGCGTAGTAGCTCCAGCATAGGTCGCTCCACCACAAGTGCCA
CACCATCTTCAGGTGGAAAGCAGCCAGACACTGGTGAAGGTAGCAGTTCC
ACATGAGAACAATCGCCACCAGCAAGGAGATGTGATAGATCTGAAAAAAT
GCGGGGAGAAGCAGTAAGATGTTTACATATAGGTTAAAGTCCCACATGCT
TTCCCCGAACTCCACTCCATAATTGGTTTCCGGTTGTAACGGAGCGAACA
TCTGGCCGATAATAGGAATATTCTGCCAAAGACTTGTCTGGGCTGTAAAA
ACATTTATGATTCGATTGATTTCCATGCTTATGTAACCTACAAGTACGTT
GTACACAAGCAAGTTTAGAGCAGGCATAAAAATCATGTCGACTGATAACT

BS14831.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG11404-PA 570 CG11404-RA 1..570 586..17 2825 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:51:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG11404-RA 806 CG11404-RA 22..595 588..15 2855 99.8 Minus
CG11404-RB 797 CG11404-RB 22..586 588..15 2725 98.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:51:21
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22548803..22549131 343..15 1645 100 Minus
3L 28110227 3L 22548591..22548752 502..341 795 99.4 Minus
3L 28110227 3L 22548458..22548544 588..502 435 100 Minus
Blast to na_te.dros performed on 2015-02-03 06:51:24 has no hits.

BS14831.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:52 Download gff for BS14831.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11404-PA 1..570 17..586 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:32:29 Download gff for BS14831.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11404-RA 11..595 15..598 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:40:04 Download gff for BS14831.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11404-RA 11..595 15..598 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:40:04 Download gff for BS14831.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 22548447..22548544 502..598 95 -> Minus
3L 22548592..22548752 341..501 99 -> Minus
3L 22548806..22549131 15..340 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:32:29 Download gff for BS14831.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22541692..22541852 341..501 99 -> Minus
arm_3L 22541906..22542231 15..340 100   Minus
arm_3L 22541547..22541644 502..598 95 -> Minus

BS14831.5prime Sequence

600 bp (515 high quality bases) assembled on 2006-10-13

> BS14831.5prime
GAAGTTATCAGTCGACATGATTTTTATGCCTGCTCTAAACTTGCTTGTGT
ACAACGTACTTGTAGGTTACATAAGCATGGAAATCAATCGAATCATAAAT
GTTTCTACAGCCCAGACAAGTCTTTGGCAGAATATTCCTATTATCGGCCA
GATGTTCGCTCCGTTACAACCGGAAACCAATTATGGAGTGGAGTTCGGGG
AAAGCATGTGGGACTTTAACCTATATGTAAACATCTTACTGCTTCTCCCC
GCATTTTTTCAGATCTATCACATCTCCTTGCTGGTGGCGATTGTTCTCAT
GTGGAACTGCTACCTTCACCAGTGTCTGGCTGCTTTCCACCTGAAGATGG
TGTGGCACTTGTGGTGGAGCGACCTATGCTGGAGCTACTACGCTTCTCTT
GTCCTTTTCGGATTCCTGTTGACCATGCTGCACTTTAGTCTGATTATAGC
AACCGTTATGTATCAGATGCAGATCGACGGAGATCCCAAACCTCGGATCC
AGTCCGAGGCTCTCCCAGAGCAGCAGCCACATCCCGCAGAGGAAATTCAG
GAACGAATGGCAATGGCCCAGACCATTAAGATCTAAAAGCTTTCTAGACC

BS14831.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG11404-PA 570 CG11404-RA 1..570 17..586 2850 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 18:05:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG11404-RA 806 CG11404-RA 22..595 15..588 2870 100 Plus
CG11404-RB 797 CG11404-RB 22..586 15..588 2725 98.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:05:04
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22548803..22549131 260..588 1645 100 Plus
3L 28110227 3L 22548591..22548752 101..262 810 100 Plus
3L 28110227 3L 22548458..22548544 15..101 435 100 Plus
Blast to na_te.dros performed on 2015-01-30 18:05:09 has no hits.

BS14831.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:53 Download gff for BS14831.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11404-PA 1..570 17..586 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:53:48 Download gff for BS14831.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11404-RA 11..595 5..588 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:08:13 Download gff for BS14831.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11404-RA 11..595 5..588 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:08:13 Download gff for BS14831.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 22548447..22548544 5..101 95 -> Plus
3L 22548592..22548752 102..262 100 -> Plus
3L 22548806..22549131 263..588 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:53:48 Download gff for BS14831.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22541547..22541644 5..101 95 -> Plus
arm_3L 22541692..22541852 102..262 100 -> Plus
arm_3L 22541906..22542231 263..588 100   Plus

BS14831.complete Sequence

602 bp assembled on 2006-11-01

GenBank Submission: FJ637797

> BS14831.complete
GAAGTTATCAGTCGACATGATTTTTATGCCTGCTCTAAACTTGCTTGTGT
ACAACGTACTTGTAGGTTACATAAGCATGGAAATCAATCGAATCATAAAT
GTTTCTACAGCCCAGACAAGTCTTTGGCAGAATATTCCTATTATCGGCCA
GATGTTCGCTCCGTTACAACCGGAAACCAATTATGGAGTGGAGTTCGGGG
AAAGCATGTGGGACTTTAACCTATATGTAAACATCTTACTGCTTCTCCCC
GCATTTTTTCAGATCTATCACATCTCCTTGCTGGTGGCGATTGTTCTCAT
GTGGAACTGCTACCTTCACCAGTGTCTGGCTGCTTTCCACCTGAAGATGG
TGTGGCACTTGTGGTGGAGCGACCTATGCTGGAGCTACTACGCTTCTCTT
GTCCTTTTCGGATTCCTGTTGACCATGCTGCACTTTAGTCTGATTATAGC
AACCGTTATGTATCAGATGCAGATCGACGGAGATCCCAAACCTCGGATCC
AGTCCGAGGCTCTCCCAGAGCAGCAGCCACATCCCGCAGAGGAAATTCAG
GAACGAATGGCAATGGCCCAGACCATTAAGATCTAAAAGCTTTCTAGACC
AT

BS14831.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:57:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG11404-RA 570 CG11404-PA 1..570 17..586 2850 100 Plus
CG11404-RB 561 CG11404-PB 1..561 17..586 2680 98.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:57:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG11404-RA 806 CG11404-RA 22..595 15..588 2870 100 Plus
CG11404-RB 797 CG11404-RB 22..586 15..588 2700 98.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:56:59
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22548803..22549131 260..588 1645 100 Plus
3L 28110227 3L 22548591..22548752 101..262 810 100 Plus
3L 28110227 3L 22548458..22548544 15..101 435 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:57:00 has no hits.

BS14831.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:34:51 Download gff for BS14831.complete
Subject Subject Range Query Range Percent Splice Strand
CG11404-RA 1..570 17..586 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:07:41 Download gff for BS14831.complete
Subject Subject Range Query Range Percent Splice Strand
CG11404-RA 11..595 5..588 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:03:04 Download gff for BS14831.complete
Subject Subject Range Query Range Percent Splice Strand
CG11404-RA 24..591 17..584 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:34:52 Download gff for BS14831.complete
Subject Subject Range Query Range Percent Splice Strand
CG11404-RA 11..595 5..588 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:29:43 Download gff for BS14831.complete
Subject Subject Range Query Range Percent Splice Strand
CG11404-RA 24..591 17..584 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:29:43 Download gff for BS14831.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22548592..22548752 102..262 100 -> Plus
3L 22548806..22549127 263..584 100   Plus
3L 22548460..22548544 17..101 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:03:04 Download gff for BS14831.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22541560..22541644 17..101 100 -> Plus
arm_3L 22541692..22541852 102..262 100 -> Plus
arm_3L 22541906..22542227 263..584 100   Plus

BS14831.pep Sequence

Translation from 16 to 585

> BS14831.pep
MIFMPALNLLVYNVLVGYISMEINRIINVSTAQTSLWQNIPIIGQMFAPL
QPETNYGVEFGESMWDFNLYVNILLLLPAFFQIYHISLLVAIVLMWNCYL
HQCLAAFHLKMVWHLWWSDLCWSYYASLVLFGFLLTMLHFSLIIATVMYQ
MQIDGDPKPRIQSEALPEQQPHPAEEIQERMAMAQTIKI*

BS14831.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:12:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG11404-PA 189 CG11404-PA 1..189 1..189 1005 100 Plus
CG11404-PB 186 CG11404-PB 1..186 1..189 978 98.4 Plus