Clone BS14832 Report

Search the DGRC for BS14832

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:148
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptMst35Bb-RA
Protein status:BS14832.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14832.3prime Sequence

465 bp (465 high quality bases) assembled on 2006-10-13

> BS14832.3prime
ATGGTCTAGAAAGCTTTTACTTGCAAATCCGTCGGCGCTTGTGGCGTTCA
CTGGTGGTGACCTTGCATGCCATCCGGCGGTATCTATCCTTTCTATGCTC
CGGGAGCTCGGCCCACGCTTTAGCGGCCTCTGCAATTAATTCCTGCGGCT
TCAAGTCACAGTGCTTCTTTCGGAAGAAACGCACGAAATTCAAATAGGCG
TTGTTAGTGACAGGTCCCTGCTTGCTGCACTTCTGACTCGGTGCACACTT
GACCTTGGGCCGAGTCGCCTTGGCACAGGCTGCCTTTCGGCGCGGCTTTG
CACAGGACTTCATTGGCTTACATTTGGGCGGTGCTCTCCTCTTTGGATGA
TTACACATTTCAGTGAGACCTTTAGGACTTTCATCTTTTGCAGAAATGGA
AATTATGCCATTCCACAGGCTCTTGCACTCATTTACATTATTTGAACTCA
TGTCGACTGATAACT

BS14832.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG4478-PA 435 Mst35Bb-RA 1..435 451..17 2175 100 Minus
CG4479-PA 441 Mst35Ba-RA 127..429 325..23 1215 96 Minus
CG4479-PA 441 Mst35Ba-RA 1..122 451..330 560 98.3 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:22:15
Subject Length Description Subject Range Query Range Score Percent Strand
Mst35Bb-RA 679 CG4478-RA 142..576 451..17 2175 100 Minus
Mst35Ba-RB 643 CG4479-RB 124..552 451..23 1890 96 Minus
Mst35Ba-RA 683 CG4479-RA 164..592 451..23 1890 96 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:22:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 14882306..14882687 70..451 1910 100 Plus
2L 23513712 2L 14879237..14879618 70..451 1655 95.5 Plus
2L 23513712 2L 14882204..14882258 17..71 275 100 Plus
2L 23513712 2L 14879141..14879189 23..71 245 100 Plus
Blast to na_te.dros performed on 2015-02-10 17:22:11 has no hits.

BS14832.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:53 Download gff for BS14832.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4478-PA 1..435 17..451 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:25:14 Download gff for BS14832.3prime
Subject Subject Range Query Range Percent Splice Strand
Mst35Bb-RA 136..580 12..456 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:09:06 Download gff for BS14832.3prime
Subject Subject Range Query Range Percent Splice Strand
Mst35Bb-RA 136..580 12..456 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:09:06 Download gff for BS14832.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 14882307..14882693 71..456 99   Plus
2L 14882200..14882257 12..70 96 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:25:14 Download gff for BS14832.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 14882200..14882257 12..70 96 <- Plus
arm_2L 14882307..14882693 71..456 99   Plus

BS14832.5prime Sequence

465 bp (465 high quality bases) assembled on 2006-10-13

> BS14832.5prime
GAAGTTATCAGTCGACATGAGTTCAAATAATGTAAATGAGTGCAAGAGCC
TGTGGAATGGCATAATTTCCATTTCTGCAAAAGATGAAAGTCCTAAAGGT
CTCACTGAAATGTGTAATCATCCAAAGAGGAGAGCACCGCCCAAATGTAA
GCCAATGAAGTCCTGTGCAAAGCCGCGCCGAAAGGCAGCCTGTGCCAAGG
CGACTCGGCCCAAGGTCAAGTGTGCACCGAGTCAGAAGTGCAGCAAGCAG
GGACCTGTCACTAACAACGCCTATTTGAATTTCGTGCGTTTCTTCCGAAA
GAAGCACTGTGACTTGAAGCCGCAGGAATTAATTGCAGAGGCCGCTAAAG
CGTGGGCCGAGCTCCCGGAGCATAGAAAGGATAGATACCGCCGGATGGCA
TGCAAGGTCACCACCAGTGAACGCCACAAGCGCCGACGGATTTGCAAGTA
AAAGCTTTCTAGACC

BS14832.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG4478-PA 435 Mst35Bb-RA 1..435 17..451 2175 100 Plus
CG4479-PA 441 Mst35Ba-RA 127..429 143..445 1215 96 Plus
CG4479-PA 441 Mst35Ba-RA 1..122 17..138 560 98.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 12:15:39
Subject Length Description Subject Range Query Range Score Percent Strand
Mst35Bb-RA 679 CG4478-RA 142..576 17..451 2175 100 Plus
Mst35Ba-RB 643 CG4479-RB 124..552 17..445 1890 96 Plus
Mst35Ba-RA 683 CG4479-RA 164..592 17..445 1890 96 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 12:15:32
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 14882306..14882687 398..17 1910 100 Minus
2L 23513712 2L 14879237..14879618 398..17 1655 95.5 Minus
2L 23513712 2L 14882204..14882258 451..397 275 100 Minus
2L 23513712 2L 14879141..14879189 445..397 245 100 Minus
Blast to na_te.dros performed on 2015-02-08 12:15:35 has no hits.

BS14832.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:53 Download gff for BS14832.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4478-PA 1..435 17..451 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:41:16 Download gff for BS14832.5prime
Subject Subject Range Query Range Percent Splice Strand
Mst35Bb-RA 136..580 12..456 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:45:52 Download gff for BS14832.5prime
Subject Subject Range Query Range Percent Splice Strand
Mst35Bb-RA 136..580 12..456 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:45:52 Download gff for BS14832.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 14882200..14882257 398..456 96 <- Minus
2L 14882307..14882693 12..397 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:41:16 Download gff for BS14832.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 14882200..14882257 398..456 96 <- Minus
arm_2L 14882307..14882693 12..397 99   Minus

BS14832.complete Sequence

467 bp assembled on 2006-11-01

GenBank Submission: FJ637798

> BS14832.complete
GAAGTTATCAGTCGACATGAGTTCAAATAATGTAAATGAGTGCAAGAGCC
TGTGGAATGGCATAATTTCCATTTCTGCAAAAGATGAAAGTCCTAAAGGT
CTCACTGAAATGTGTAATCATCCAAAGAGGAGAGCACCGCCCAAATGTAA
GCCAATGAAGTCCTGTGCAAAGCCGCGCCGAAAGGCAGCCTGTGCCAAGG
CGACTCGGCCCAAGGTCAAGTGTGCACCGAGTCAGAAGTGCAGCAAGCAG
GGACCTGTCACTAACAACGCCTATTTGAATTTCGTGCGTTTCTTCCGAAA
GAAGCACTGTGACTTGAAGCCGCAGGAATTAATTGCAGAGGCCGCTAAAG
CGTGGGCCGAGCTCCCGGAGCATAGAAAGGATAGATACCGCCGGATGGCA
TGCAAGGTCACCACCAGTGAACGCCACAAGCGCCGACGGATTTGCAAGTA
AAAGCTTTCTAGACCAT

BS14832.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:47:45
Subject Length Description Subject Range Query Range Score Percent Strand
Mst35Bb-RA 435 CG4478-PA 1..435 17..451 2175 100 Plus
Mst35Ba-RB 441 CG4479-PB 1..429 17..445 1890 96 Plus
Mst35Ba-RA 441 CG4479-PA 1..429 17..445 1890 96 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:47:46
Subject Length Description Subject Range Query Range Score Percent Strand
Mst35Bb-RA 679 CG4478-RA 142..576 17..451 2175 100 Plus
Mst35Ba-RB 643 CG4479-RB 124..552 17..445 1890 96 Plus
Mst35Ba-RA 683 CG4479-RA 164..592 17..445 1890 96 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:47:43
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 14882306..14882687 398..17 1910 100 Minus
2L 23513712 2L 14879237..14879618 398..17 1655 95.5 Minus
2L 23513712 2L 14882204..14882258 451..397 275 100 Minus
2L 23513712 2L 14879141..14879189 445..397 245 100 Minus
Blast to na_te.dros performed on 2014-11-27 12:47:44 has no hits.

BS14832.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:46:46 Download gff for BS14832.complete
Subject Subject Range Query Range Percent Splice Strand
Mst35Bb-RA 1..435 17..451 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:34:33 Download gff for BS14832.complete
Subject Subject Range Query Range Percent Splice Strand
Mst35Bb-RA 130..574 12..456 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:46:03 Download gff for BS14832.complete
Subject Subject Range Query Range Percent Splice Strand
Mst35Bb-RA 142..574 17..449 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:46:46 Download gff for BS14832.complete
Subject Subject Range Query Range Percent Splice Strand
Mst35Bb-RA 130..574 12..456 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:04:47 Download gff for BS14832.complete
Subject Subject Range Query Range Percent Splice Strand
Mst35Bb-RA 142..574 17..449 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:04:47 Download gff for BS14832.complete
Subject Subject Range Query Range Percent Splice Strand
2L 14882206..14882257 398..449 100 <- Minus
2L 14882307..14882687 17..397 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:46:03 Download gff for BS14832.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 14882206..14882257 398..449 100 <- Minus
arm_2L 14882307..14882687 17..397 100   Minus

BS14832.pep Sequence

Translation from 16 to 450

> BS14832.pep
MSSNNVNECKSLWNGIISISAKDESPKGLTEMCNHPKRRAPPKCKPMKSC
AKPRRKAACAKATRPKVKCAPSQKCSKQGPVTNNAYLNFVRFFRKKHCDL
KPQELIAEAAKAWAELPEHRKDRYRRMACKVTTSERHKRRRICK*

BS14832.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:40:01
Subject Length Description Subject Range Query Range Score Percent Strand
Mst35Bb-PA 144 CG4478-PA 1..144 1..144 786 100 Plus
Mst35Ba-PB 146 CG4479-PB 1..144 1..144 720 92.4 Plus
Mst35Ba-PA 146 CG4479-PA 1..144 1..144 720 92.4 Plus