Clone Sequence Records
BS14832.3prime Sequence
465 bp (465 high quality bases) assembled on 2006-10-13
> BS14832.3prime
ATGGTCTAGAAAGCTTTTACTTGCAAATCCGTCGGCGCTTGTGGCGTTCA
CTGGTGGTGACCTTGCATGCCATCCGGCGGTATCTATCCTTTCTATGCTC
CGGGAGCTCGGCCCACGCTTTAGCGGCCTCTGCAATTAATTCCTGCGGCT
TCAAGTCACAGTGCTTCTTTCGGAAGAAACGCACGAAATTCAAATAGGCG
TTGTTAGTGACAGGTCCCTGCTTGCTGCACTTCTGACTCGGTGCACACTT
GACCTTGGGCCGAGTCGCCTTGGCACAGGCTGCCTTTCGGCGCGGCTTTG
CACAGGACTTCATTGGCTTACATTTGGGCGGTGCTCTCCTCTTTGGATGA
TTACACATTTCAGTGAGACCTTTAGGACTTTCATCTTTTGCAGAAATGGA
AATTATGCCATTCCACAGGCTCTTGCACTCATTTACATTATTTGAACTCA
TGTCGACTGATAACT
BS14832.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4478-PA | 435 | Mst35Bb-RA | 1..435 | 451..17 | 2175 | 100 | Minus |
CG4479-PA | 441 | Mst35Ba-RA | 127..429 | 325..23 | 1215 | 96 | Minus |
CG4479-PA | 441 | Mst35Ba-RA | 1..122 | 451..330 | 560 | 98.3 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:22:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mst35Bb-RA | 679 | CG4478-RA | 142..576 | 451..17 | 2175 | 100 | Minus |
Mst35Ba-RB | 643 | CG4479-RB | 124..552 | 451..23 | 1890 | 96 | Minus |
Mst35Ba-RA | 683 | CG4479-RA | 164..592 | 451..23 | 1890 | 96 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:22:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 14882306..14882687 | 70..451 | 1910 | 100 | Plus |
2L | 23513712 | 2L | 14879237..14879618 | 70..451 | 1655 | 95.5 | Plus |
2L | 23513712 | 2L | 14882204..14882258 | 17..71 | 275 | 100 | Plus |
2L | 23513712 | 2L | 14879141..14879189 | 23..71 | 245 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 17:22:11 has no hits.
BS14832.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:53 Download gff for
BS14832.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4478-PA | 1..435 | 17..451 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:25:14 Download gff for
BS14832.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst35Bb-RA | 136..580 | 12..456 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:09:06 Download gff for
BS14832.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst35Bb-RA | 136..580 | 12..456 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:09:06 Download gff for
BS14832.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 14882307..14882693 | 71..456 | 99 | | Plus |
2L | 14882200..14882257 | 12..70 | 96 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:25:14 Download gff for
BS14832.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 14882200..14882257 | 12..70 | 96 | <- | Plus |
arm_2L | 14882307..14882693 | 71..456 | 99 | | Plus |
BS14832.5prime Sequence
465 bp (465 high quality bases) assembled on 2006-10-13
> BS14832.5prime
GAAGTTATCAGTCGACATGAGTTCAAATAATGTAAATGAGTGCAAGAGCC
TGTGGAATGGCATAATTTCCATTTCTGCAAAAGATGAAAGTCCTAAAGGT
CTCACTGAAATGTGTAATCATCCAAAGAGGAGAGCACCGCCCAAATGTAA
GCCAATGAAGTCCTGTGCAAAGCCGCGCCGAAAGGCAGCCTGTGCCAAGG
CGACTCGGCCCAAGGTCAAGTGTGCACCGAGTCAGAAGTGCAGCAAGCAG
GGACCTGTCACTAACAACGCCTATTTGAATTTCGTGCGTTTCTTCCGAAA
GAAGCACTGTGACTTGAAGCCGCAGGAATTAATTGCAGAGGCCGCTAAAG
CGTGGGCCGAGCTCCCGGAGCATAGAAAGGATAGATACCGCCGGATGGCA
TGCAAGGTCACCACCAGTGAACGCCACAAGCGCCGACGGATTTGCAAGTA
AAAGCTTTCTAGACC
BS14832.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4478-PA | 435 | Mst35Bb-RA | 1..435 | 17..451 | 2175 | 100 | Plus |
CG4479-PA | 441 | Mst35Ba-RA | 127..429 | 143..445 | 1215 | 96 | Plus |
CG4479-PA | 441 | Mst35Ba-RA | 1..122 | 17..138 | 560 | 98.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 12:15:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mst35Bb-RA | 679 | CG4478-RA | 142..576 | 17..451 | 2175 | 100 | Plus |
Mst35Ba-RB | 643 | CG4479-RB | 124..552 | 17..445 | 1890 | 96 | Plus |
Mst35Ba-RA | 683 | CG4479-RA | 164..592 | 17..445 | 1890 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 12:15:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 14882306..14882687 | 398..17 | 1910 | 100 | Minus |
2L | 23513712 | 2L | 14879237..14879618 | 398..17 | 1655 | 95.5 | Minus |
2L | 23513712 | 2L | 14882204..14882258 | 451..397 | 275 | 100 | Minus |
2L | 23513712 | 2L | 14879141..14879189 | 445..397 | 245 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-08 12:15:35 has no hits.
BS14832.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:53 Download gff for
BS14832.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4478-PA | 1..435 | 17..451 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:41:16 Download gff for
BS14832.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst35Bb-RA | 136..580 | 12..456 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:45:52 Download gff for
BS14832.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst35Bb-RA | 136..580 | 12..456 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:45:52 Download gff for
BS14832.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 14882200..14882257 | 398..456 | 96 | <- | Minus |
2L | 14882307..14882693 | 12..397 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:41:16 Download gff for
BS14832.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 14882200..14882257 | 398..456 | 96 | <- | Minus |
arm_2L | 14882307..14882693 | 12..397 | 99 | | Minus |
BS14832.complete Sequence
467 bp assembled on 2006-11-01
GenBank Submission: FJ637798
> BS14832.complete
GAAGTTATCAGTCGACATGAGTTCAAATAATGTAAATGAGTGCAAGAGCC
TGTGGAATGGCATAATTTCCATTTCTGCAAAAGATGAAAGTCCTAAAGGT
CTCACTGAAATGTGTAATCATCCAAAGAGGAGAGCACCGCCCAAATGTAA
GCCAATGAAGTCCTGTGCAAAGCCGCGCCGAAAGGCAGCCTGTGCCAAGG
CGACTCGGCCCAAGGTCAAGTGTGCACCGAGTCAGAAGTGCAGCAAGCAG
GGACCTGTCACTAACAACGCCTATTTGAATTTCGTGCGTTTCTTCCGAAA
GAAGCACTGTGACTTGAAGCCGCAGGAATTAATTGCAGAGGCCGCTAAAG
CGTGGGCCGAGCTCCCGGAGCATAGAAAGGATAGATACCGCCGGATGGCA
TGCAAGGTCACCACCAGTGAACGCCACAAGCGCCGACGGATTTGCAAGTA
AAAGCTTTCTAGACCAT
BS14832.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:47:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mst35Bb-RA | 435 | CG4478-PA | 1..435 | 17..451 | 2175 | 100 | Plus |
Mst35Ba-RB | 441 | CG4479-PB | 1..429 | 17..445 | 1890 | 96 | Plus |
Mst35Ba-RA | 441 | CG4479-PA | 1..429 | 17..445 | 1890 | 96 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:47:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mst35Bb-RA | 679 | CG4478-RA | 142..576 | 17..451 | 2175 | 100 | Plus |
Mst35Ba-RB | 643 | CG4479-RB | 124..552 | 17..445 | 1890 | 96 | Plus |
Mst35Ba-RA | 683 | CG4479-RA | 164..592 | 17..445 | 1890 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:47:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 14882306..14882687 | 398..17 | 1910 | 100 | Minus |
2L | 23513712 | 2L | 14879237..14879618 | 398..17 | 1655 | 95.5 | Minus |
2L | 23513712 | 2L | 14882204..14882258 | 451..397 | 275 | 100 | Minus |
2L | 23513712 | 2L | 14879141..14879189 | 445..397 | 245 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 12:47:44 has no hits.
BS14832.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:46:46 Download gff for
BS14832.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst35Bb-RA | 1..435 | 17..451 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:34:33 Download gff for
BS14832.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst35Bb-RA | 130..574 | 12..456 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:46:03 Download gff for
BS14832.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst35Bb-RA | 142..574 | 17..449 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:46:46 Download gff for
BS14832.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst35Bb-RA | 130..574 | 12..456 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:04:47 Download gff for
BS14832.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst35Bb-RA | 142..574 | 17..449 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:04:47 Download gff for
BS14832.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 14882206..14882257 | 398..449 | 100 | <- | Minus |
2L | 14882307..14882687 | 17..397 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:46:03 Download gff for
BS14832.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 14882206..14882257 | 398..449 | 100 | <- | Minus |
arm_2L | 14882307..14882687 | 17..397 | 100 | | Minus |
BS14832.pep Sequence
Translation from 16 to 450
> BS14832.pep
MSSNNVNECKSLWNGIISISAKDESPKGLTEMCNHPKRRAPPKCKPMKSC
AKPRRKAACAKATRPKVKCAPSQKCSKQGPVTNNAYLNFVRFFRKKHCDL
KPQELIAEAAKAWAELPEHRKDRYRRMACKVTTSERHKRRRICK*
BS14832.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:40:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mst35Bb-PA | 144 | CG4478-PA | 1..144 | 1..144 | 786 | 100 | Plus |
Mst35Ba-PB | 146 | CG4479-PB | 1..144 | 1..144 | 720 | 92.4 | Plus |
Mst35Ba-PA | 146 | CG4479-PA | 1..144 | 1..144 | 720 | 92.4 | Plus |