Clone Sequence Records
BS14837.complete Sequence
2771 bp assembled on 2009-12-07
GenBank Submission: KX803874
> BS14837.complete
GAAGTTATCAGTCGACATGTGGACTTTGACGTGCCAACAGTTTATTGCCC
TAATTCTCCTCGGCACTTTGGTGCCCAGTGAGTCTTTTTTGTGCAAGCAT
TGCTTCAGGAAAAATCTTGAAAAAGTTCACGAATCGTTTAGGGACATTCT
TAGTCCTCCGATATTTGGAGTAAACCCACAGCCATTGATTGAAGTGCAGC
AACCGAAAGTGACCCCAAAGCCCGAGTCTTCACAAGTGATTCACGTACAT
CAACCACAAGTGATACTTAAGCCTATCTACTATCCAAAAGTCGATACTAT
TTCTACGAAAAATCAGATAGGAATACATGGGCCGTACAGTCAGTATCCAT
CCCTCCTGCCGTCAGCCAATTTACTTGGAATTCCAAATCAACAACTAATT
AATGCACAAGACGTGCTCTCAGACAAAGATCAGAAACAGACGCAAGTTCA
GAACAATAACTTACATATTCGATTCGGTGTGTCAGCACTAAGAGAAGGAA
GAAATAATCCTAGTTTGGAAACGATTTCTCGGGATAAAGTAGATAAAATA
TCACCTGCATTGCAGTTGCAACTGTTGAGATATGCAGATTCTCAGTCGCA
ATCCCAGACGCAGTCACAATCTGCCTCACAATCTGAATCAAATGCATCTT
CACAATTCCAGGCACAGGAGCAAAGCAATCGACTGTTGGAAAACCCACCT
GTTTCAGAATCTCAGTCACAATCAGAGTCACAGTCACAGTCCGAGTCACA
GAAGCAGTCACAGTCGCAGTCACAGCGACAGCAACAGATACAGACGCAAT
TGCAAATACTGCGACAGTTGCAACAAAAGTCAAATGAGCAATCTGCCGCA
CAATCTGCTTCTCAGATTCAATCGCAGAGGCAATCGGATTCTCAATCCAA
CTTACAATTACAAGAACAATCACAATCGCAGTCAGAGCAAGGTAAGCCAA
TCCAGTCACAAATTCAAATTCTTCAAGGGCTGCAGCAAAAAGAGTTAGAT
GACAAATCTGCATCACAGTCGCAGTCCGAATCCAAGACACGGCAAGAGCA
ACAAAAACAGTTGAATTTGCAACAACTTGAGGAGCTATCGTCTTCACTAT
CACAGTCACGGCTAGGGCTGGGACAGCAAATCCAGTCACAGCTACAAAAG
AATCAGTTGGATAAGCAATTTGCTTCACAGTTTCAGTCACAATCCAAGTC
ACAGCTGGAGCAACAAATGCAATTGCAATTACAAAGCCTTCGGCAACTGC
AGCAGAAGCAATTAGATGAGCAATCTGCTTCACAGTCGCAGCCACAGTCA
CAGGTAGCGCAACAGATCCAGTCACATTTGCAACTTCTTCGATTACTGCA
ATCCAGATTGAAGACGCAGTCGGCATTGAAATCAGATTTAGAACAACAAA
TCCTTTTGCAACTAAAGAAACTTACAGAAGTGCAACAGAAACAGTTGGCT
GAGCAACCCACCTTACGACCCAGTTCAAAATCACAGTCGCCTGGGCAGCT
AGAGCAGCAAATTCTGTTACAGCTGCAAAATCTTCTACAGTTTCAGCAGA
ATCAGCTAAAATCAGATACACAAACCCAAAGCCAGTTGCAAGAGTCAAAA
TCTAACTCACTGTCACAGTCACAGTCACAATCGCAGGAGCAGTTACAGTT
GCAGCGGGATCAGAATCTTCGGCAATTGGAACAAATAAAGTTGGAAATGC
AAAATATTCGAGAGCTGCTGCAGAAGGGCAAGTCTGAGCTACAAACCCAA
TCGGACTCTCAGCGACGTATACATGAGCTATACCAAAATATTCTGCAGCT
AAATAAGGAGAAGTTGAGCTACCAATTGAAACAGTTAAAACTAAAAGAAT
TGGAAGACCAAAAGAAGTCGCAGGCAGAAATATCAAAGGGAAGTAACCCA
TCCAATCTATTTATTATCGGACAATTGCCTTCCGAAGGAAAGCCAGCTCC
TGGAAATCAAGGTCCTTCAATTGAGCCTAAGCTGGTCCCCCAACCCGGTT
CACTGGACAAATTGCCATCAGGCGGAGGGCTAATTGGCAAGCCAGCTTCA
ACAGGACTGTATATTTTATCGCCGGATTTCAATGATTTGTCGGATTACCG
AGATCAGTTTCGTCTACAGCAAGAATTAAAAAAGCATCAAAATATATTGA
GCCTTTTGCAGCGTAGACAAAATGATATTAAAAAACAACAAAACGCACAG
CTGTTGCTAGGACAACAACAGAAGGAACAACAAGCTCAGGAATCAATCAA
TAAACAACAGTCCTCATCTGCTGGCTCTAGTTCTCAGACCAAGTTACAGC
AAGATATACAAAGTACTGGAGCTCAAGGCTCACAGCAGGGTCTTCAAGCT
GGATCCACTGGCCTGCAGACTAGTTCCCTACAAGGCACAGAAAGTTCTGC
ATCTCAAAGCGCCGCTCTTCAGCGATTGAAGGAGCAGGAACAACTGCGAA
TTCAGACGGAAAATGATCAGAAAACCTCTTCTTCAAGCTCGCACAGTAAC
TCACAAAACTCGCAGAGTTCGTCATCACAGTCATCGCAGGCATCACAGTC
TGAAGCACAACGACAGGAGGCTGGCAATCGAAATACCTTGCTACTAGATC
AATCGAGCTCCAAGACTCAGTCGGAGTCGAAGTCCGAGTCGTCGTCTCAA
TCATCGTCACATTCATCGTCGCAGTCAACGTCGAACTCATCTTCAAACGT
TCAATCGAAACTACAAGGAGAAAGCCAAGCGCTGCTAAACAATTTGTCAG
GTTAAAAGCTTTCTAGACCAT
BS14837.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:51:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp36DE-RB | 2739 | CG7157-PB | 1..2739 | 17..2755 | 13695 | 100 | Plus |
| Acp36DE-RA | 2739 | CG7157-PA | 1..2739 | 17..2755 | 13695 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:51:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp36DE-RB | 2921 | CG7157-RB | 5..2743 | 17..2755 | 13695 | 100 | Plus |
| Acp36DE-RA | 2843 | CG7157-RA | 5..2743 | 17..2755 | 13695 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:51:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18356225..18358755 | 2755..225 | 12655 | 100 | Minus |
| 2L | 23513712 | 2L | 18358813..18359022 | 226..17 | 1050 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:51:13 has no hits.
BS14837.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:42:13 Download gff for
BS14837.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp36DE-RA | 5..2741 | 17..2753 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:59:35 Download gff for
BS14837.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp36DE-RA | 5..2741 | 17..2753 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:04:01 Download gff for
BS14837.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp36DE-RA | 5..2741 | 17..2753 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:58:22 Download gff for
BS14837.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp36DE-RA | 5..2741 | 17..2753 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:58:22 Download gff for
BS14837.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18356227..18358753 | 227..2753 | 100 | <- | Minus |
| 2L | 18358813..18359022 | 17..226 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:59:35 Download gff for
BS14837.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18356227..18358753 | 227..2753 | 100 | <- | Minus |
| arm_2L | 18358813..18359022 | 17..226 | 100 | | Minus |
BS14837.3prime Sequence
806 bp (754 high quality bases) assembled on 2006-10-13
> BS14837.3prime
ATGGTCTAGAAAGCTTTTAACCTGACAAATTGTTTAGCAGCGCTTGGCTT
TCTCCTTGTAGTTTCGATTGAACGTTTGAAGATGAGTTCGACGTTGACTG
CGACGATGAATGTGACGATGATTGAGACGACGACTCGGACTTCGACTCCG
ACTGAGTCTTGGAGCTCGATTGATCTAGTAGCAAGGTATTTCGATTGCCA
GCCTCCTGTCGTTGTGCTTCAGACTGTGATGCCTGCGATGACTGTGATGA
CGAACTCTGCGAGTTTTGTGAGTTACTGTGCGAGCTTGAAGAAGAGGTTT
TCTGATCATTTTCCGTCTGAATTCGCAGTTGTTCCTGCTCCTTCAATCGC
TGAAGAGCGGCGCTTTGAGATGCAGAACTTTCTGTGCCTTGTAGGGAACT
AGTCTGCAGGCCAGTGGATCCAGCTTGAAGACCCTGCTGTGAGCCTTGAG
CTCCAGTACTTTGTATATCTTGCTGTAACTTGGTCTGAGAACTAGAGCCA
GCAGATGAGGACTGTTGTTTATTGATTGATTCCTGAGCTTGTTGTTCCTT
CTGTTGTTGTCCTAGCAACAGCTGTGCGTTTTGTTGTTTTTTAATATCAT
TTTGTCTACGCTGCAAAAGGCTCAATATATTTTGATGCTTTTTTAATTCT
TGCTGTAGACGAAACTGATCTCGGTAATCCGACAAATCATTGAAATCCGG
CGATAAAATATACAGTCCTGTTGAAGCTGGCTTGCCAATTAGCCCTCCGC
CTGATGGCAATTTGTCCAGTGAACCGGGTTGGGGGACCAGCTTAGGCTCA
ATTGAA
BS14837.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:18:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7157-PA | 2739 | Acp36DE-RA | 1950..2739 | 806..17 | 3950 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:25:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp36DE-RB | 2921 | CG7157-RB | 1954..2743 | 806..17 | 3950 | 100 | Minus |
| Acp36DE-RA | 2843 | CG7157-RA | 1954..2743 | 806..17 | 3950 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:24:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18356225..18357014 | 17..806 | 3950 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 23:24:58 has no hits.
BS14837.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:56 Download gff for
BS14837.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7157-PA | 1952..2739 | 17..804 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 13:57:51 Download gff for
BS14837.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp36DE-RA | 1954..2749 | 11..806 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:47:18 Download gff for
BS14837.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp36DE-RA | 1954..2749 | 11..806 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:47:18 Download gff for
BS14837.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18356219..18357014 | 11..806 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 13:57:51 Download gff for
BS14837.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18356219..18357014 | 11..806 | 99 | | Plus |
BS14837.5prime Sequence
869 bp (862 high quality bases) assembled on 2006-10-13
> BS14837.5prime
GAAGTTATCAGTCGACATGTGGACTTTGACGTGCCAACAGTTTATTGCCC
TAATTCTCCTCGGCACTTTGGTGCCCAGTGAGTCTTTTTTGTGCAAGCAT
TGCTTCAGGAAAAATCTTGAAAAAGTTCACGAATCGTTTAGGGACATTCT
TAGTCCTCCGATATTTGGAGTAAACCCACAGCCATTGATTGAAGTGCAGC
AACCGAAAGTGACCCCAAAGCCCGAGTCTTCACAAGTGATTCACGTACAT
CAACCACAAGTGATACTTAAGCCTATCTACTATCCAAAAGTCGATACTAT
TTCTACGAAAAATCAGATAGGAATACATGGGCCGTACAGTCAGTATCCAT
CCCTCCTGCCGTCAGCCAATTTACTTGGAATTCCAAATCAACAACTAATT
AATGCACAAGACGTGCTCTCAGACAAAGATCAGAAACAGACGCAAGTTCA
GAACAATAACTTACATATTCGATTCGGTGTGTCAGCACTAAGAGAAGGAA
GAAATAATCCTAGTTTGGAAACGATTTCTCGGGATAAAGTAGATAAAATA
TCACCTGCATTGCAGTTGCAACTGTTGAGATATGCAGATTCTCAGTCGCA
ATCCCAGACGCAGTCACAATCTGCCTCACAATCTGAATCAAATGCATCTT
CACAATTCCAGGCACAGGAGCAAAGCAATCGACTGTTGGAAAACCCACCT
GTTTCAGAATCTCAGTCACAATCAGAGTCACAGTCACAGTCCGAGTCACA
GAAGCAGTCACAGTCGCAGTCACAGCGACAGCAACAGATACAGACGCAAT
TGCAAATACTGCGACAGTTGCAACAAAAGTCAAATGAGCAATCTGCCGCA
CAATCTGCTTCTCAGATTC
BS14837.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:18:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7157-PA | 2739 | Acp36DE-RA | 1..853 | 17..869 | 4265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:08:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp36DE-RB | 2921 | CG7157-RB | 5..857 | 17..869 | 4265 | 100 | Plus |
| Acp36DE-RA | 2843 | CG7157-RA | 5..857 | 17..869 | 4265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:07:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18358111..18358755 | 869..225 | 3225 | 100 | Minus |
| 2L | 23513712 | 2L | 18358813..18359022 | 226..17 | 1050 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 17:08:01 has no hits.
BS14837.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:56:56 Download gff for
BS14837.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7157-PA | 1..853 | 17..869 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 17:10:43 Download gff for
BS14837.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp36DE-RA | 3..857 | 15..869 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:57:24 Download gff for
BS14837.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp36DE-RA | 3..857 | 15..869 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:57:24 Download gff for
BS14837.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18358111..18358753 | 227..869 | 100 | <- | Minus |
| 2L | 18358813..18359022 | 17..226 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 17:10:43 Download gff for
BS14837.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18358111..18358753 | 227..869 | 100 | <- | Minus |
| arm_2L | 18358813..18359022 | 17..226 | 100 | | Minus |
BS14837.pep Sequence
Translation from 16 to 2754
> BS14837.pep
MWTLTCQQFIALILLGTLVPSESFLCKHCFRKNLEKVHESFRDILSPPIF
GVNPQPLIEVQQPKVTPKPESSQVIHVHQPQVILKPIYYPKVDTISTKNQ
IGIHGPYSQYPSLLPSANLLGIPNQQLINAQDVLSDKDQKQTQVQNNNLH
IRFGVSALREGRNNPSLETISRDKVDKISPALQLQLLRYADSQSQSQTQS
QSASQSESNASSQFQAQEQSNRLLENPPVSESQSQSESQSQSESQKQSQS
QSQRQQQIQTQLQILRQLQQKSNEQSAAQSASQIQSQRQSDSQSNLQLQE
QSQSQSEQGKPIQSQIQILQGLQQKELDDKSASQSQSESKTRQEQQKQLN
LQQLEELSSSLSQSRLGLGQQIQSQLQKNQLDKQFASQFQSQSKSQLEQQ
MQLQLQSLRQLQQKQLDEQSASQSQPQSQVAQQIQSHLQLLRLLQSRLKT
QSALKSDLEQQILLQLKKLTEVQQKQLAEQPTLRPSSKSQSPGQLEQQIL
LQLQNLLQFQQNQLKSDTQTQSQLQESKSNSLSQSQSQSQEQLQLQRDQN
LRQLEQIKLEMQNIRELLQKGKSELQTQSDSQRRIHELYQNILQLNKEKL
SYQLKQLKLKELEDQKKSQAEISKGSNPSNLFIIGQLPSEGKPAPGNQGP
SIEPKLVPQPGSLDKLPSGGGLIGKPASTGLYILSPDFNDLSDYRDQFRL
QQELKKHQNILSLLQRRQNDIKKQQNAQLLLGQQQKEQQAQESINKQQSS
SAGSSSQTKLQQDIQSTGAQGSQQGLQAGSTGLQTSSLQGTESSASQSAA
LQRLKEQEQLRIQTENDQKTSSSSSHSNSQNSQSSSSQSSQASQSEAQRQ
EAGNRNTLLLDQSSSKTQSESKSESSSQSSSHSSSQSTSNSSSNVQSKLQ
GESQALLNNLSG*
BS14837.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:07:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp36DE-PB | 912 | CG7157-PB | 1..912 | 1..912 | 4449 | 100 | Plus |
| Acp36DE-PA | 912 | CG7157-PA | 1..912 | 1..912 | 4449 | 100 | Plus |
| CG17097-PB | 1087 | CG17097-PB | 34..643 | 291..911 | 371 | 30.5 | Plus |
| ptip-PA | 2294 | CG32133-PA | 182..895 | 175..900 | 364 | 23.6 | Plus |
| ptip-PA | 2294 | CG32133-PA | 410..1292 | 53..901 | 355 | 24.2 | Plus |
| CG31872-PB | 1073 | CG31872-PB | 145..672 | 55..582 | 340 | 28 | Plus |
| CG17097-PB | 1087 | CG17097-PB | 59..620 | 124..651 | 339 | 28.3 | Plus |
| CG17097-PB | 1087 | CG17097-PB | 36..695 | 215..882 | 332 | 27.2 | Plus |
| ptip-PA | 2294 | CG32133-PA | 301..1189 | 59..904 | 330 | 22.5 | Plus |
| ptip-PA | 2294 | CG32133-PA | 811..1370 | 193..763 | 329 | 25.4 | Plus |
| ptip-PA | 2294 | CG32133-PA | 816..1636 | 61..849 | 297 | 22.3 | Plus |
| CG17097-PB | 1087 | CG17097-PB | 343..687 | 180..479 | 285 | 36.4 | Plus |
| ptip-PA | 2294 | CG32133-PA | 885..1766 | 61..847 | 275 | 21.7 | Plus |
| ptip-PA | 2294 | CG32133-PA | 190..685 | 408..904 | 175 | 21.4 | Plus |
