Clone Sequence Records
BS14851.3prime Sequence
798 bp (725 high quality bases) assembled on 2006-10-13
> BS14851.3prime
ATGGTCTAGAAAGCTTCTAGGATTTCTTCATGCGGTAATAGTTCCAAACC
ACGCACATGGGCGGCTGGTTGATGCAGAAGCAATGCGTCGGCGGAACATC
GGGAAGCGGATACGGTTGGCACTCCGAAAAGCTGGGATACTTGGTCCGGG
GGCGAACGCAATTGGAGGGGGGGCGTCCTGGCCGGCAGCCGGTCGTAATG
GCCTGCTTGCAGAAGGGCATCTTGAACCTGGGGCAGGAGCTCTTCGCTGG
CTTCGGGCGGCAAAGCCCCAGCCCAAGGCTCTTGTTGCCTTTGGAGCAAA
CCTTCGAAGGATGGAGCGGCAGAGTTCGAAGGCTCCGTCGATGAATTTTG
GGCGGACGGGACCGGCAAACGGCCTTCCTTTTGCGCTCCTGCAGCTCGCA
CTCGCACCAGGTGCGCTGGTACTTGCGATTCAGCTTATCGGTGGGCTTGT
AGAACATGAGGTCAGACGGCGGATAGGCCATCGCACAGCGATCGGACAGG
CATCTTTTACGGGAGTCAATAAAGGCCGGCACGTTGAACTCGGGGTCGGA
ACGGCACTTGTACTCACTGCGCCGCATCGACATCCAGCAGATGTCCTTGA
CCGGCACCTTGGTGTTGTCCGCGGGATCATTCTTTTTCAGATCCTTTCGT
TCGGTGGCCATCGTGGGCGCACCAAATTCATACGGATCGAACAACGACTC
CATGCGCACCTGAATGGTCCTTGACGTCAATCCACTCCTTATGGCAACCG
GTGCTCGGGAGAGCGTGTTCTTGGCCAGCATCATGTCGACTGATAACT
BS14851.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30362-PA | 768 | CG30362-RA | 1..768 | 784..17 | 3840 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:55:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| boly-RA | 1139 | CG30362-RA | 304..1071 | 784..17 | 3840 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:55:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8365618..8366385 | 17..784 | 3840 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 17:55:21 has no hits.
BS14851.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:57:07 Download gff for
BS14851.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30362-PA | 1..768 | 17..784 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:45:03 Download gff for
BS14851.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| boly-RA | 304..1075 | 13..784 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:49:52 Download gff for
BS14851.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| boly-RA | 304..1075 | 13..784 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 19:49:52 Download gff for
BS14851.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8365614..8366385 | 13..784 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:45:03 Download gff for
BS14851.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4253119..4253890 | 13..784 | 99 | | Plus |
BS14851.5prime Sequence
798 bp (754 high quality bases) assembled on 2006-10-13
> BS14851.5prime
GAAGTTATCAGTCGACATGATGCTGGCCAAGAACACGCTCTCCCGAGCAC
CGGTTGCCATAAGGAGTGGATTGACGTCAAGGACCATTCAGGTGCGCATG
GAGTCGTTGTTCGATCCGTATGAATTTGGTGCGCCCACGATGGCCACCGA
ACGAAAGGATCTGAAAAAGAATGATCCCGCGGACAACACCAAGGTGCCGG
TCAAGGACATCTGCTGGATGTCGATGCGGCGCAGTGAGTACAAGTGCCGT
TCCGACCCCGAGTTCAACGTGCCGGCCTTTATTGACTCCCGTAAAAGATG
CCTGTCCGATCGCTGTGCGATGGCCTATCCGCCGTCTGACCTCATGTTCT
ACAAGCCCACCGATAAGCTGAATCGCAAGTACCAGCGCACCTGGTGCGAG
TGCGAGCTGCAGGAGCGCAAAAGGAAGGCCGTTTGCCGGTCCCGTCCGCC
CAAAATTCATCGACGGAGCCTTCGAACTCTGCCGCTCCATCCTTCGAAGG
TTTGCTCCAAAGGCAACAAGAGCCTTGGGCTGGGGCTTTGCCGCCCGAAG
CCAGCGAAGAGCTCCTGCCCCAGGTTCAAGATGCCCTTCTGCAAGCAGGC
CATTACGACCGGCTGCCGGCCAGGACGCCCCCCCTCCAATTGCGTTCGCC
CCCGGACCAAGTATCCCAGCTTTTCGGAGTGCCAACCGTATCCGCTTCCC
GATGTTCCGCCGACGCATTGCTTCTGCATCAACCAGCCGCCCATGTGCGT
GGTTTGGAACTATTACCGCATGAAGAAATCCTAGAAGCTTTCTAGACC
BS14851.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30362-PA | 768 | CG30362-RA | 1..768 | 17..784 | 3840 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 18:06:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| boly-RA | 1139 | CG30362-RA | 304..1071 | 17..784 | 3840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:06:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8365618..8366385 | 784..17 | 3840 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-30 18:06:09 has no hits.
BS14851.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:57:07 Download gff for
BS14851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30362-PA | 1..768 | 17..784 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:54:01 Download gff for
BS14851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| boly-RA | 304..1075 | 17..788 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:08:21 Download gff for
BS14851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| boly-RA | 304..1075 | 17..788 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:08:21 Download gff for
BS14851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8365614..8366385 | 17..788 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:54:01 Download gff for
BS14851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4253119..4253890 | 17..788 | 99 | | Minus |
BS14851.complete Sequence
800 bp assembled on 2006-11-01
GenBank Submission: FJ637804
> BS14851.complete
GAAGTTATCAGTCGACATGATGCTGGCCAAGAACACGCTCTCCCGAGCAC
CGGTTGCCATAAGGAGTGGATTGACGTCAAGGACCATTCAGGTGCGCATG
GAGTCGTTGTTCGATCCGTATGAATTTGGTGCGCCCACGATGGCCACCGA
ACGAAAGGATCTGAAAAAGAATGATCCCGCGGACAACACCAAGGTGCCGG
TCAAGGACATCTGCTGGATGTCGATGCGGCGCAGTGAGTACAAGTGCCGT
TCCGACCCCGAGTTCAACGTGCCGGCCTTTATTGACTCCCGTAAAAGATG
CCTGTCCGATCGCTGTGCGATGGCCTATCCGCCGTCTGACCTCATGTTCT
ACAAGCCCACCGATAAGCTGAATCGCAAGTACCAGCGCACCTGGTGCGAG
TGCGAGCTGCAGGAGCGCAAAAGGAAGGCCGTTTGCCGGTCCCGTCCGCC
CAAAATTCATCGACGGAGCCTTCGAACTCTGCCGCTCCATCCTTCGAAGG
TTTGCTCCAAAGGCAACAAGAGCCTTGGGCTGGGGCTTTGCCGCCCGAAG
CCAGCGAAGAGCTCCTGCCCCAGGTTCAAGATGCCCTTCTGCAAGCAGGC
CATTACGACCGGCTGCCGGCCAGGACGCCCCCCCTCCAATTGCGTTCGCC
CCCGGACCAAGTATCCCAGCTTTTCGGAGTGCCAACCGTATCCGCTTCCC
GATGTTCCGCCGACGCATTGCTTCTGCATCAACCAGCCGCCCATGTGCGT
GGTTTGGAACTATTACCGCATGAAGAAATCCTAGAAGCTTTCTAGACCAT
BS14851.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:40:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| boly-RA | 768 | CG30362-PA | 1..768 | 17..784 | 3840 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:40:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| boly-RA | 1139 | CG30362-RA | 304..1071 | 17..784 | 3840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:40:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8365618..8366385 | 784..17 | 3840 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 19:40:46 has no hits.
BS14851.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:34:40 Download gff for
BS14851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30362-RA | 1..768 | 17..784 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:07:26 Download gff for
BS14851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30362-RA | 276..1047 | 17..788 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:57:59 Download gff for
BS14851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| boly-RA | 304..1071 | 17..784 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:34:40 Download gff for
BS14851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30362-RA | 276..1047 | 17..788 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:06:11 Download gff for
BS14851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| boly-RA | 304..1071 | 17..784 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:06:11 Download gff for
BS14851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8365618..8366385 | 17..784 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:57:59 Download gff for
BS14851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4253123..4253890 | 17..784 | 100 | | Minus |
BS14851.pep Sequence
Translation from 16 to 783
> BS14851.pep
MMLAKNTLSRAPVAIRSGLTSRTIQVRMESLFDPYEFGAPTMATERKDLK
KNDPADNTKVPVKDICWMSMRRSEYKCRSDPEFNVPAFIDSRKRCLSDRC
AMAYPPSDLMFYKPTDKLNRKYQRTWCECELQERKRKAVCRSRPPKIHRR
SLRTLPLHPSKVCSKGNKSLGLGLCRPKPAKSSCPRFKMPFCKQAITTGC
RPGRPPSNCVRPRTKYPSFSECQPYPLPDVPPTHCFCINQPPMCVVWNYY
RMKKS*
BS14851.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:12:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| boly-PA | 255 | CG30362-PA | 1..255 | 1..255 | 1417 | 100 | Plus |
| CG4691-PA | 262 | CG4691-PA | 41..260 | 33..253 | 487 | 47.3 | Plus |
| CG12861-PA | 239 | CG12861-PA | 50..237 | 64..253 | 255 | 33.5 | Plus |
| CG2127-PB | 289 | CG2127-PB | 89..275 | 45..253 | 222 | 30.7 | Plus |
| CG2127-PA | 305 | CG2127-PA | 105..291 | 45..253 | 222 | 30.7 | Plus |
