Clone BS14859 Report

Search the DGRC for BS14859

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:148
Well:59
Vector:pDNR-Dual
Associated Gene/TranscriptAats-his-RA
Protein status:BS14859.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14859.3prime Sequence

836 bp (833 high quality bases) assembled on 2006-10-13

> BS14859.3prime
ATGGTCTAGAAAGCTTCTAGGCGGAGGCTTGCTGCCGTCGCCGGATCTCG
GCGGCCAGATCCTCAAGCTTTACGTTGGTCTCCTCGCGCGTGGTCACCTC
ACGCAGTTTGACCAATCCCTGCGCCAGCTCTGCGTCGCCGAGGACAACCA
CCAGAGGAATCTGGTGCTCCTCGCAGTGCTGCAGCTGTACTAACAGCTTA
GGGTTCAGCTTGTAAGAGTGCTCCGCCTTCACGCCCGCATCCCACAGCAG
GTTCAGAACCTTCAGACGCTGCTCGTGGAGACCCTTGTGGGCGGAGGCCA
CGTAAACCTCCACGTCGCTGGTTCGCAACTTCAGACCGCTTGCAGCCGCC
CGCGCCTCCAGAACCGAGAAAATGCGCTCCACGCCAATAGACACGCCCAC
GCAGGGCACAGCCTTGCCGCGCGGATCGAACATGCCCACCAGGTTGTCGT
AGCGACCGCCTCCAGCCACGGATCCCACGGTGGCCGGCTCGTTCGCCTGC
TCTCCGTTCTGCTGTGATGTCTTCGCCGGAGATGCCACGGTGGCGGACTC
TCCCTTGAGCACACCTTCGTAGATAACACCGGTGTAGTAGTCCAGGCCAC
GGGCCAGACTCAAATCGAAGCTAACTCGCTTATCCAGACCGAATATGGAA
CAGTACTTAAGGAGCTGCTTCATGCCCTCCAGACCCTTTACGGCATTTGG
CACAGCCTTGAGCTTCTCGTTGGCCAGCAGTTGTTCCACCAGCTCGGCAC
CGCCGCTCAGTCGCACGTACTCGCCAATTCGATCCGCTGCTGCCTCGTCC
AGACCCTTCTCATCCACCATCTCCTTGCGCACATCC

BS14859.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG6335-PB 1692 Aats-his-RB 873..1692 836..17 4100 100 Minus
CG6335-PA 1569 Aats-his-RA 750..1569 836..17 4100 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 12:16:50
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-his-RE 2862 CG6335-RE 1796..2615 836..17 4100 100 Minus
Aats-his-RD 2104 CG6335-RD 1038..1857 836..17 4100 100 Minus
Aats-his-RC 2250 CG6335-RC 1184..2003 836..17 4100 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 12:16:43
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18519326..18519936 836..226 3055 100 Minus
X 23542271 X 18519987..18520198 228..17 1060 100 Minus
Blast to na_te.dros performed on 2015-02-08 12:16:47 has no hits.

BS14859.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:57:12 Download gff for BS14859.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6335-PA 750..1569 17..836 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:41:26 Download gff for BS14859.3prime
Subject Subject Range Query Range Percent Splice Strand
Aats-his-RC 1184..2006 12..836 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:46:03 Download gff for BS14859.3prime
Subject Subject Range Query Range Percent Splice Strand
Aats-his-RC 1184..2006 12..836 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:46:03 Download gff for BS14859.3prime
Subject Subject Range Query Range Percent Splice Strand
X 18519326..18519935 227..836 100 -> Minus
X 18519989..18520201 12..226 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:41:26 Download gff for BS14859.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 18413359..18413968 227..836 100 -> Minus
arm_X 18414022..18414234 12..226 99   Minus

BS14859.5prime Sequence

898 bp (758 high quality bases) assembled on 2006-10-13

> BS14859.5prime
GAAGTTATCAGTCGACATGAGTGATACGCGTGAGCAGATTCTGGAGCAAA
TCAAAGTGCAAGGCGATCTCGTCCGTCAATTGAAAGCAGCGAAGGAGTCG
AAGGAGAAGATCGATGAGGAGGTCGCCCGCCTACTGGCCCTAAAGGCCAC
TCTTGGCGGAGATGCCGCCCCCACCAATCAGAAGTTCACGCTAAAGACGC
CCAAAGGCACACGGGACTATGGTCCTCAGCAGATGACCCTGCGCCAGGGC
GTCCTGGACAAGATCGTCCAGGTGTTCAAGCGCCACGGCGGCGAAGCCAT
CGATACGCCCGTGTTCGAGCTGAAGGAAGTGCTGACGGGCAAGTACGGCG
AGGACTCAAAGCTGATCTACGACTTGAAGGATCAGGGCGGTGAGATCCTA
TCGATGAGGTATGACTTGACCGTGCCGCTGGCTCGTTACCTGGCGATGAA
CAAGATCTCGAGCATCAAGCGCTACCACATCGCCAAGGTCTATCGACGCG
ACAATCCGGCAATGACCAAGGGTCGCTATCGGGAGTTCTACCAATGTGAC
TTCGACATCGCCGGCACCTACGATCCCATGCTGCCGGATGCCGAGTGCGT
CAAGATTGTGTCGGAGATACTGGACACGCTGGACATTGGAGACTATGTGA
TAAAGCTAAATCACCGCCAGCTTTTGGACGGCATGTTCCAGGCGTGCGGA
GTGCCGGCGGATAGCTTCCGCACCATCTGCTCAGCGGTGGATAAGTTGGA
TAAGTCGCCCTGGGCGGATGTGCGCAAGGAGATGGTGGATGAGAAGGGTC
TGGACGAGGCAGCAGCGGATCGAATTGGCGAGTACGTGCGACTGAGCGGC
GGTGCCGAGCTGGTGGAACAACTGCTGGCCAACGAAAAGCTCAGGGCT

BS14859.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG6335-PA 1569 Aats-his-RA 1..877 17..893 4360 99.8 Plus
CG6335-PB 1692 Aats-his-RB 433..1000 326..893 2815 99.8 Plus
CG6335-PB 1692 Aats-his-RB 158..376 108..326 1095 100 Plus
CG6335-PB 1692 Aats-his-RB 1..93 17..109 465 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:25:23
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-his-RA 1978 CG6335-RA 163..1044 17..898 4380 99.8 Plus
Aats-his-RE 2862 CG6335-RE 1138..1928 108..898 3925 99.7 Plus
Aats-his-RD 2104 CG6335-RD 380..1170 108..898 3925 99.7 Plus
Aats-his-RE 2862 CG6335-RE 163..255 17..109 465 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:25:18
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18518823..18519253 324..754 2155 100 Plus
X 23542271 X 18517809..18518027 108..326 1095 100 Plus
X 23542271 X 18519313..18519458 753..898 700 98.6 Plus
X 23542271 X 18515590..18515682 17..109 465 100 Plus
Blast to na_te.dros performed on 2015-02-10 21:25:21 has no hits.

BS14859.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:57:13 Download gff for BS14859.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6335-PA 1..882 17..898 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 06:29:14 Download gff for BS14859.5prime
Subject Subject Range Query Range Percent Splice Strand
Aats-his-RA 163..1044 17..898 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:43:45 Download gff for BS14859.5prime
Subject Subject Range Query Range Percent Splice Strand
Aats-his-RA 163..1044 17..898 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:43:45 Download gff for BS14859.5prime
Subject Subject Range Query Range Percent Splice Strand
X 18515590..18515682 17..109 100 -> Plus
X 18517811..18518026 110..325 100 -> Plus
X 18518825..18519253 326..754 100 -> Plus
X 18519315..18519458 755..898 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 06:29:14 Download gff for BS14859.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 18409623..18409715 17..109 100 -> Plus
arm_X 18411844..18412059 110..325 100 -> Plus
arm_X 18412858..18413286 326..754 100 -> Plus
arm_X 18413348..18413491 755..898 98   Plus

BS14859.complete Sequence

1601 bp assembled on 2006-11-01

GenBank Submission: FJ637808

> BS14859.complete
GAAGTTATCAGTCGACATGAGTGATACGCGTGAGCAGATTCTGGAGCAAA
TCAAAGTGCAAGGCGATCTCGTCCGTCAATTGAAAGCAGCGAAGGAGTCG
AAGGAGAAGATCGATGAGGAGGTCGCCCGCCTACTGGCCCTAAAGGCCAC
TCTTGGCGGAGATGCCGCCCCCACCAATCAGAAGTTCACGCTAAAGACGC
CCAAAGGCACACGGGACTATGGTCCTCAGCAGATGACCCTGCGCCAGGGC
GTCCTGGACAAGATCGTCCAGGTGTTCAAGCGCCACGGCGGCGAAGCCAT
CGATACGCCCGTGTTCGAGCTGAAGGAAGTGCTGACGGGCAAGTACGGCG
AGGACTCAAAGCTGATCTACGACTTGAAGGATCAGGGCGGTGAGATCCTA
TCGATGAGGTATGACTTGACCGTGCCGCTGGCTCGTTACCTGGCGATGAA
CAAGATCTCGAGCATCAAGCGCTACCACATCGCCAAGGTCTATCGACGCG
ACAATCCGGCAATGACCAAGGGTCGCTATCGGGAGTTCTACCAATGTGAC
TTCGACATCGCCGGCACCTACGATCCCATGCTGCCGGATGCCGAGTGCGT
CAAGATTGTGTCGGAGATACTGGACACGCTGGACATTGGAGACTATGTGA
TAAAGCTAAATCACCGCCAGCTTTTGGACGGCATGTTCCAGGCGTGCGGA
GTGCCGGCGGATAGCTTCCGCACCATCTGCTCAGCGGTGGATAAGTTGGA
TAAGTCGCCCTGGGCGGATGTGCGCAAGGAGATGGTGGATGAGAAGGGTC
TGGACGAGGCAGCAGCGGATCGAATTGGCGAGTACGTGCGACTGAGCGGC
GGTGCCGAGCTGGTGGAACAACTGCTGGCCAACGAGAAGCTCAAGGCTGT
GCCAAATGCCGTAAAGGGTCTGGAGGGCATGAAGCAGCTCCTTAAGTACT
GTTCCATATTCGGTCTGGATAAGCGAGTTAGCTTCGATTTGAGTCTGGCC
CGTGGCCTGGACTACTACACCGGTGTTATCTACGAAGGTGTGCTCAAGGG
AGAGTCCGCCACCGTGGCATCTCCGGCGAAGACATCACAGCAGAACGGAG
AGCAGGCGAACGAGCCGGCCACCGTGGGATCCGTGGCTGGAGGCGGTCGC
TACGACAACCTGGTGGGCATGTTCGATCCGCGCGGCAAGGCTGTGCCCTG
CGTGGGCGTGTCTATTGGCGTGGAGCGCATTTTCTCGGTTCTGGAGGCGC
GGGCGGCTGCAAGCGGTCTGAAGTTGCGAACCAGCGACGTGGAGGTTTAC
GTGGCCTCCGCCCACAAGGGTCTCCACGAGCAGCGTCTGAAGGTTCTGAA
CCTGCTGTGGGATGCGGGCGTGAAGGCGGAGCACTCTTACAAGCTGAACC
CTAAGCTGTTAGTACAGCTGCAGCACTGCGAGGAGCACCAGATTCCTCTG
GTGGTTGTCCTCGGCGACGCAGAGCTGGCGCAGGGATTGGTCAAACTGCG
TGAGGTGACCACGCGCGAGGAGACCAACGTAAAGCTTGAGGATCTGGCCG
CCGAGATCCGGCGACGGCAGCAAGCCTCCGCCTAGAAGCTTTCTAGACCA
T

BS14859.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:57:24
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-his-RA 1569 CG6335-PA 1..1569 17..1585 7845 100 Plus
Aats-his-RE 1665 CG6335-PE 188..1665 108..1585 7390 100 Plus
Aats-his-RD 1695 CG6335-PD 218..1695 108..1585 7390 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:57:26
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-his-RA 1978 CG6335-RA 163..1731 17..1585 7845 100 Plus
Aats-his-RE 2862 CG6335-RE 1138..2615 108..1585 7390 100 Plus
Aats-his-RD 2104 CG6335-RD 380..1857 108..1585 7390 100 Plus
Aats-his-RE 2862 CG6335-RE 163..255 17..109 465 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:57:23
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18519313..18519936 753..1376 3120 100 Plus
X 23542271 X 18518823..18519253 324..754 2155 100 Plus
X 23542271 X 18517809..18518027 108..326 1095 100 Plus
X 23542271 X 18519987..18520198 1374..1585 1060 100 Plus
X 23542271 X 18515590..18515682 17..109 465 100 Plus
Blast to na_te.dros performed on 2014-11-27 15:57:23 has no hits.

BS14859.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:34:44 Download gff for BS14859.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-his-RA 1..1569 17..1585 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:07:30 Download gff for BS14859.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-his-RA 192..1763 17..1590 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:52:51 Download gff for BS14859.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-his-RA 163..1731 17..1585 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:34:44 Download gff for BS14859.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-his-RA 192..1763 17..1590 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:06:49 Download gff for BS14859.complete
Subject Subject Range Query Range Percent Splice Strand
Aats-his-RA 163..1731 17..1585 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:06:49 Download gff for BS14859.complete
Subject Subject Range Query Range Percent Splice Strand
X 18517811..18518026 110..325 100 -> Plus
X 18515590..18515682 17..109 100 -> Plus
X 18518825..18519253 326..754 100 -> Plus
X 18519315..18519935 755..1375 100 -> Plus
X 18519989..18520198 1376..1585 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:52:51 Download gff for BS14859.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 18411844..18412059 110..325 100 -> Plus
arm_X 18409623..18409715 17..109 100 -> Plus
arm_X 18412858..18413286 326..754 100 -> Plus
arm_X 18413348..18413968 755..1375 100 -> Plus
arm_X 18414022..18414231 1376..1585 100   Plus

BS14859.pep Sequence

Translation from 16 to 1584

> BS14859.pep
MSDTREQILEQIKVQGDLVRQLKAAKESKEKIDEEVARLLALKATLGGDA
APTNQKFTLKTPKGTRDYGPQQMTLRQGVLDKIVQVFKRHGGEAIDTPVF
ELKEVLTGKYGEDSKLIYDLKDQGGEILSMRYDLTVPLARYLAMNKISSI
KRYHIAKVYRRDNPAMTKGRYREFYQCDFDIAGTYDPMLPDAECVKIVSE
ILDTLDIGDYVIKLNHRQLLDGMFQACGVPADSFRTICSAVDKLDKSPWA
DVRKEMVDEKGLDEAAADRIGEYVRLSGGAELVEQLLANEKLKAVPNAVK
GLEGMKQLLKYCSIFGLDKRVSFDLSLARGLDYYTGVIYEGVLKGESATV
ASPAKTSQQNGEQANEPATVGSVAGGGRYDNLVGMFDPRGKAVPCVGVSI
GVERIFSVLEARAAASGLKLRTSDVEVYVASAHKGLHEQRLKVLNLLWDA
GVKAEHSYKLNPKLLVQLQHCEEHQIPLVVVLGDAELAQGLVKLREVTTR
EETNVKLEDLAAEIRRRQQASA*

BS14859.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:12:28
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-his-PA 522 CG6335-PA 1..522 1..522 2648 100 Plus
Aats-his-PD 564 CG6335-PD 1..564 1..522 2595 92.6 Plus
Aats-his-PE 554 CG6335-PE 39..554 5..522 2507 96.1 Plus
Aats-his-PC 554 CG6335-PC 39..554 5..522 2507 96.1 Plus