Clone BS14863 Report

Search the DGRC for BS14863

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:148
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptCG9919-RA
Protein status:BS14863.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14863.3prime Sequence

832 bp (716 high quality bases) assembled on 2006-10-13

> BS14863.3prime
ATGGTCTAGAAAGCTTTTACATGGATGTTCCGTTCTGGGAGGAGGCATCG
CTGATGCGACGTGACAGCGTCGTCTTGCGGCTAATGGACTTGGTGTTGCC
GATCTGATTGGCGCTGGTATGATAGTTGGAGCTCGAACCGCCGCTGGTCG
GGGTGTCAGTGTTCAGTGATTCCACAGTTCGCATCGCCGAACGCTTCAGG
GAGCCAGTCACCTCGTGCGGCTCCTGGTAGCCGGAGTCCATGTCATCATG
GTAGGAGTCCATCAATGGCGTGGGATCCTCATAGTCGTAGTCAACGAAGC
CATTGTTGTCAAAGGACTTGACAAACGACTGCGAATGCTTCTCGTAGCCA
CGGAACACCTGGCTGTGCGACTTGCCGCGATAGTCCACCGATTCGTAGTG
CCCATCCTGGGAGTTCTCGATGATGAAGTGCCTGGTGCCGTGGGGCGTTA
GTGTGGCCCACAGTAGACGGCTATCGTTGACCAGCTGGCTCTGGAGCAGA
TCCCTACTGTTGGCCGTGGCGCAGGGATAAAGAATTCCGCCGGATGTGAA
GGCATTGGATTTGGTCGCCTCGCCGAGGGCATTAATGGCCGTCTGCTTGA
TATTGGCGTCGTGGTACGAGAAAAAGGAGCTGTCTCTGCACCGCATCACG
ATGAGGGCCAGGAAGCAGCCGAACACAAAGATCCCGATGCAGGACGAGAC
AAACAGCCAGACGCTCTCCCGACTCTTGGAATCACTTCTCACCAGCTCCA
TTAGCGCGTTTCCGCTCTCGTTGTGCTGCATCCCATGGCCGCACATGAAG
GCGGCAAAGCACGGCTGCCACTCATTGGAGGG

BS14863.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG9919-PA 957 CG9919-RA 142..957 832..17 4030 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:21:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG9919-RA 1647 CG9919-RA 198..1014 832..16 4055 99.8 Minus
CG9919-RB 1644 CG9919-RB 198..1011 832..16 4000 99.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:21:24
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16329515..16329830 317..632 1580 100 Plus
X 23542271 X 16329070..16329372 16..318 1515 100 Plus
X 23542271 X 16329895..16330094 633..832 970 99 Plus
Blast to na_te.dros performed on 2015-01-31 10:21:26 has no hits.

BS14863.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:57:15 Download gff for BS14863.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9919-PA 142..957 17..832 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:37:20 Download gff for BS14863.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9919-RA 198..1022 8..832 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:46:15 Download gff for BS14863.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9919-RA 198..1022 8..832 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:46:15 Download gff for BS14863.3prime
Subject Subject Range Query Range Percent Splice Strand
X 16329062..16329370 8..316 98 <- Plus
X 16329515..16329830 317..632 100 <- Plus
X 16329895..16330094 633..832 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:37:20 Download gff for BS14863.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 16223095..16223403 8..316 98 <- Plus
arm_X 16223548..16223863 317..632 100 <- Plus
arm_X 16223928..16224127 633..832 99   Plus

BS14863.5prime Sequence

854 bp (797 high quality bases) assembled on 2006-10-13

> BS14863.5prime
GAAGTTATCAGTCGACATGATGAACATGCTCTTTGGCAATTGTGTGGGCA
GCTGTGACCAGCTGGCCGGTCCACCGCCGGACTTTATATTATCGATGCCG
CCGCCGCCGCTGCCGTCCTTTCTAATCTCAAAGCCGGCGACGGTGGACAT
CCTGGTGCCCTCCAATGAGTCGCAGCCGTGCTTTGCCGCCTTCATGTGCG
GCCATGGGATGCAGCACAACGAGAGCGGAAACGCGCTAATGGAGCTGGTG
AGAAGTGATTCCAAGAGTCTGGAGAGCGTCTGGCTGTTTGTCTCGTCCTG
CATCGGGATCTTTGTGTTCGGCTGCTTCCTGGCCCTCATCGTGATGCGGT
GCAGAGACAGCTCCTTTTTCTCGTACCACGACGCCAATATCAAGCAGACG
GCCATTAATGCCCTCGGCGAGGCGACCAAATCCAATGCCTTCACATCCGG
CGGAATTCTTTATCCCTGCGCCACGGCCAACAGTAGGGATCTGCTCCAGA
GCCAGCTGGTCAACGATAGCCGTCTACTGTGGGCCACACTAACGCCCCAC
GGCACCAGGCACTTCATCATCGAGAACTCCCAGGATGGGCACTACGAATC
GGTGGACTATCGCGGCAAGTCGCACAGCCAGGTGTTCCGTGGCTACGAGA
AGCATTCGCAGTCGTTTGTCAAGTCCTTTGACAACAATGGCTTCGTTGAC
TACGACTATGAGGATCCCACGCCATTGATGGACTCCTACCATGATGACAT
GGACTCCGGCTACCAGGAGCCGCACGAGGTGACTGGCTCCCTGAAGCGTT
CGGCGATGCGAACTGTGGAATCACTGAACACTGACACCCCGACCAGCGGC
GGTT

BS14863.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG9919-PA 957 CG9919-RA 1..838 17..854 4190 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:03:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG9919-RA 1647 CG9919-RA 56..894 16..854 4195 100 Plus
CG9919-RB 1644 CG9919-RB 56..891 16..854 4140 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:03:38
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16329895..16330236 357..16 1710 100 Minus
X 23542271 X 16329515..16329830 673..358 1580 100 Minus
X 23542271 X 16329190..16329372 854..672 915 100 Minus
Blast to na_te.dros performed on 2015-02-12 04:03:39 has no hits.

BS14863.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:57:16 Download gff for BS14863.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9919-PA 1..838 17..854 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:34:23 Download gff for BS14863.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9919-RA 51..894 10..854 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:05:55 Download gff for BS14863.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9919-RA 51..894 10..854 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:05:55 Download gff for BS14863.5prime
Subject Subject Range Query Range Percent Splice Strand
X 16329190..16329370 674..854 100 <- Minus
X 16329515..16329830 358..673 100 <- Minus
X 16329895..16330241 10..357 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:34:23 Download gff for BS14863.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 16223223..16223403 674..854 100 <- Minus
arm_X 16223548..16223863 358..673 100 <- Minus
arm_X 16223928..16224274 10..357 99   Minus

BS14863.complete Sequence

989 bp assembled on 2006-11-01

GenBank Submission: FJ637810

> BS14863.complete
GAAGTTATCAGTCGACATGATGAACATGCTCTTTGGCAATTGTGTGGGCA
GCTGTGACCAGCTGGCCGGTCCACCGCCGGACTTTATATTATCGATGCCG
CCGCCGCCGCTGCCGTCCTTTCTAATCTCAAAGCCGGCGACGGTGGACAT
CCTGGTGCCCTCCAATGAGTCGCAGCCGTGCTTTGCCGCCTTCATGTGCG
GCCATGGGATGCAGCACAACGAGAGCGGAAACGCGCTAATGGAGCTGGTG
AGAAGTGATTCCAAGAGTCTGGAGAGCGTCTGGCTGTTTGTCTCGTCCTG
CATCGGGATCTTTGTGTTCGGCTGCTTCCTGGCCCTCATCGTGATGCGGT
GCAGAGACAGCTCCTTTTTCTCGTACCACGACGCCAATATCAAGCAGACG
GCCATTAATGCCCTCGGCGAGGCGACCAAATCCAATGCCTTCACATCCGG
CGGAATTCTTTATCCCTGCGCCACGGCCAACAGTAGGGATCTGCTCCAGA
GCCAGCTGGTCAACGATAGCCGTCTACTGTGGGCCACACTAACGCCCCAC
GGCACCAGGCACTTCATCATCGAGAACTCCCAGGATGGGCACTACGAATC
GGTGGACTATCGCGGCAAGTCGCACAGCCAGGTGTTCCGTGGCTACGAGA
AGCATTCGCAGTCGTTTGTCAAGTCCTTTGACAACAATGGCTTCGTTGAC
TACGACTATGAGGATCCCACGCCATTGATGGACTCCTACCATGATGACAT
GGACTCCGGCTACCAGGAGCCGCACGAGGTGACTGGCTCCCTGAAGCGTT
CGGCGATGCGAACTGTGGAATCACTGAACACTGACACCCCGACCAGCGGC
GGTTCGAGCTCCAACTATCATACCAGCGCCAATCAGATCGGCAACACCAA
GTCCATTAGCCGCAAGACGACGCTGTCACGTCGCATCAGCGATGCCTCCT
CCCAGAACGGAACATCCATGTAAAAGCTTTCTAGACCAT

BS14863.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:19:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG9919-RA 957 CG9919-PA 1..957 17..973 4785 100 Plus
CG9919-RB 954 CG9919-PB 1..954 17..973 4705 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:19:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG9919-RA 1647 CG9919-RA 56..1014 16..974 4795 100 Plus
CG9919-RB 1644 CG9919-RB 56..1011 16..974 4715 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:19:42
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16329895..16330236 357..16 1710 100 Minus
X 23542271 X 16329515..16329830 673..358 1580 100 Minus
X 23542271 X 16329070..16329372 974..672 1515 100 Minus
Blast to na_te.dros performed on 2014-11-27 14:19:43 has no hits.

BS14863.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:34:47 Download gff for BS14863.complete
Subject Subject Range Query Range Percent Splice Strand
CG9919-RA 1..957 17..973 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:07:34 Download gff for BS14863.complete
Subject Subject Range Query Range Percent Splice Strand
CG9919-RA 32..1003 10..982 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:40:01 Download gff for BS14863.complete
Subject Subject Range Query Range Percent Splice Strand
CG9919-RA 57..1011 17..971 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:34:47 Download gff for BS14863.complete
Subject Subject Range Query Range Percent Splice Strand
CG9919-RA 32..1003 10..982 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:08:49 Download gff for BS14863.complete
Subject Subject Range Query Range Percent Splice Strand
CG9919-RA 57..1011 17..971 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:08:49 Download gff for BS14863.complete
Subject Subject Range Query Range Percent Splice Strand
X 16329073..16329370 674..971 100 <- Minus
X 16329515..16329830 358..673 100 <- Minus
X 16329895..16330235 17..357 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:40:01 Download gff for BS14863.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16223928..16224268 17..357 100   Minus
arm_X 16223106..16223403 674..971 100 <- Minus
arm_X 16223548..16223863 358..673 100 <- Minus

BS14863.pep Sequence

Translation from 16 to 972

> BS14863.pep
MMNMLFGNCVGSCDQLAGPPPDFILSMPPPPLPSFLISKPATVDILVPSN
ESQPCFAAFMCGHGMQHNESGNALMELVRSDSKSLESVWLFVSSCIGIFV
FGCFLALIVMRCRDSSFFSYHDANIKQTAINALGEATKSNAFTSGGILYP
CATANSRDLLQSQLVNDSRLLWATLTPHGTRHFIIENSQDGHYESVDYRG
KSHSQVFRGYEKHSQSFVKSFDNNGFVDYDYEDPTPLMDSYHDDMDSGYQ
EPHEVTGSLKRSAMRTVESLNTDTPTSGGSSSNYHTSANQIGNTKSISRK
TTLSRRISDASSQNGTSM*

BS14863.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:12:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG9919-PA 318 CG9919-PA 1..318 1..318 1683 100 Plus
CG9919-PB 317 CG9919-PB 1..317 1..318 1667 99.7 Plus