Clone Sequence Records
BS14867.3prime Sequence
862 bp (748 high quality bases) assembled on 2006-10-13
> BS14867.3prime
ATGGTCTAGAAAGCTTCTAACCCTCCTGTCCGGATATTTCGAGCTCTTCC
TCTGCGTTAATCAGGGTCACAACGCCATCCTGCAGAGTTTTGACCAGTTC
GAACTCGGTGAAACCAAGCTTCCTCTTATTTGATATGTCCATGACACCAT
CTTCCACGGTGGACAGCTCGCCGCCATCGGTGCCGCGTACCTGCAGCTGC
TGTTCCTCGGCGAGGGCGAGTAGACGATCGGGGTCCTTGCTGAGTAGCGG
CAGACGGATGTGCACCGAAGCCCGCAGGGTGGTGCCCAAATTGGTGGGGC
AAGCCGTAAGGTTTCCATAACGCGGATGCCGGGCAAAGGCCAACGTCTTC
TCCAGTTCGGTTAGACCGTTGACAAGGCGATTGTAAACATCGCCCAAGTC
GCCGCACTGTGCCATGGACATAATGTGCACATGGTCCTGGCGATTCACCC
AGATCAAGAAGGTCTCGGCGGGATTGTGGTAGACACCACGACCAGTTGGC
CAGAAACGATAGCAGCCGGCTGTGGTCAGCTTCTCATCGCCGCGCTGGAA
TAATATATGTCTCTTGACCATCTCCGCCTGGGTCTCAGCATCGATGTCCG
CCATTGTCAGATAGGAGCCAATCAGCTCGCCATCCATTGTCTCCGTGGCC
GAACGCACCTTCTCCTCCACCTCTATGAATTGCTTCTCGGTCAGTTTGGG
GAAGAAGGGCAGACCTTCGATATTGCGAGCCAATCTGATTCGTGCGGACA
GAATGTACTTGCGCTCCGGATCCAAGTTCTCGATCTCGTCCACGTTGCCA
AAGTCTGGGTCTTTCTGCAGCACATCGTTCTCGTTGTCCATCTGGCCATG
ATAGTCCTTTAT
BS14867.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4546-PA | 1374 | CG4546-RA | 529..1374 | 862..17 | 4230 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:52:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4546-RA | 1773 | CG4546-RA | 775..1622 | 862..15 | 4240 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:52:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15847438..15848285 | 862..15 | 4240 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-03 06:52:13 has no hits.
BS14867.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:57:17 Download gff for
BS14867.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4546-PA | 529..1374 | 17..862 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:32:40 Download gff for
BS14867.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4546-RA | 801..1648 | 15..862 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:40:11 Download gff for
BS14867.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4546-RA | 775..1622 | 15..862 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:40:11 Download gff for
BS14867.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15847438..15848285 | 15..862 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:32:40 Download gff for
BS14867.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11673160..11674007 | 15..862 | 100 | | Minus |
BS14867.5prime Sequence
744 bp (743 high quality bases) assembled on 2006-10-13
> BS14867.5prime
GAAGTTATCAGTCGACATGACTTCGATCGAGTCAAAACGCGTCCAATATC
GAAAGTATTTGGAACGCGCCGGAGTCATCGATGCCTTAAGCAAGGCTCTG
ATTAAGCTTTACGAAGAGCAGAATAAGCCGGAGGATGCCATTCGCTTTGT
ACGCAAGTTTATGTGCGAGAGCTGCCCGGACGATGCCCAGTACGATGTAA
TGAAGAACGACCTCGAGGAGGCCAAGACCCACATCTCGAAACTGGAGCAG
GAGCTTGAACGGCTACGCGGACAAATCAAAAAGTCACCGGAGGAGTACCA
GGAGCTCACTACTGAGGGCTACAAATCGCTCATGGATGATGAGGAGAACG
TGAGCTCACTGCTGCGCAAATACCTGACTCCGGAATTGCTGGAGGAGTAC
ATGCTGGTCACCACACCTGCGCCGGTGGATGCCTACCTATACGATTGCGC
CGTCTCCGGATTCGAGCACCACGACGCGCCCGTGGGCATTTTCGCGGCAG
ATGCTGACAGCTATGACGTGTTCAACAAACTCTTTGATCCGATCATAAAG
GACTATCATGGCCAGATGGACAACGAGAACGATGTGCTGCAGAAAGACCC
AGACTTTGGCAACGTGGACGAGATCGAGAACTTGGATCCGGAGCGCAAGT
ACATTCTGTCCGCACGAATCAGATTGGCTCGCAATATCGAAGGTCTGCCC
TTCTTCCCCAAACTGACCGAGAAGCAATTCATAGAGGTGGAGGA
BS14867.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:53:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4546-PA | 1374 | CG4546-RA | 1..728 | 17..744 | 3640 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 12:17:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4546-RA | 1773 | CG4546-RA | 247..974 | 17..744 | 3640 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 12:17:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15847170..15847637 | 277..744 | 2340 | 100 | Plus |
| 3R | 32079331 | 3R | 15846854..15847105 | 25..276 | 1260 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-08 12:17:11 has no hits.
BS14867.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:57:18 Download gff for
BS14867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4546-PA | 1..727 | 17..743 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:41:28 Download gff for
BS14867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4546-RA | 273..999 | 17..743 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:46:06 Download gff for
BS14867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4546-RA | 247..973 | 17..743 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:46:06 Download gff for
BS14867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15846849..15847105 | 21..276 | 99 | -> | Plus |
| 3R | 15847170..15847636 | 277..743 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:41:28 Download gff for
BS14867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11672571..11672827 | 21..276 | 99 | -> | Plus |
| arm_3R | 11672892..11673358 | 277..743 | 100 | | Plus |
BS14867.complete Sequence
1406 bp assembled on 2006-11-01
> BS14867.complete
GAAGTTATCAGTCGACATGACTTCGATCGAGTCAAAACGCGTCCAATATC
GAAAGTATTTGGAACGCGCCGGAGTCATCGATGCCTTAAGCAAGGCTCTG
ATTAAGCTTTACGAAGAGCAGAATAAGCCGGAGGATGCCATTCGCTTTGT
ACGCAAGTTTATGTGCGAGAGCTGCCCGGACGATGCCCAGTACGATGTAA
TGAAGAACGACCTCGAGGAGGCCAAGACCCACATCTCGAAACTGGAGCAG
GAGCTTGAACGGCTACGCGGACAAATCAAAAAGTCACCGGAGGAGTACCA
GGAGCTCACTACTGAGGGCTACAAATCGCTCATGGATGATGAGGAGAACG
TGAGCTCACTGCTGCGCAAATACCTGACTCCGGAATTGCTGGAGGAGTAC
ATGCTGGTCACCACACCTGCGCCGGTGGATGCCTACCTATACGATTGCGC
CGTCTCCGGATTCGAGCACCACGACGCGCCCGTGGGCATTTTCGCGGCAG
ATGCTGACAGCTATGACGTGTTCAACAAACTCTTTGATCCGATCATAAAG
GACTATCATGGCCAGATGGACAACGAGAACGATGTGCTGCAGAAAGACCC
AGACTTTGGCAACGTGGACGAGATCGAGAACTTGGATCCGGAGCGCAAGT
ACATTCTGTCCGCACGAATCAGATTGGCTCGCAATATCGAAGGTCTGCCC
TTCTTCCCCAAACTGACCGAGAAGCAATTCATAGAGGTGGAGGAGAAGGT
GCGTTCGGCCACGGAGACAATGGATGGCGAGCTGATTGGCTCCTATCTGA
CAATGGCGGACATCGATGCTGAGACCCAGGCGGAGATGGTCAAGAGACAT
ATATTATTCCAGCGCGGCGATGAGAAGCTGACCACAGCCGGCTGCTATCG
TTTCTGGCCAACTGGTCGTGGTGTCTACCACAATCCCGCCGAGACCTTCT
TGATCTGGGTGAATCGCCAGGACCATGTGCACATTATGTCCATGGCACAG
TGCGGCGACTTGGGCGATGTTTACAATCGCCTTGTCAACGGTCTAACCGA
ACTGGAGAAGACGTTGGCCTTTGCCCGGCATCCGCGTTATGGAAACCTTA
CGGCTTGCCCCACCAATTTGGGCACCACCCTGCGGGCTTCGGTGCACATC
CGTCTGCCGCTACTCAGCAAGGACCCCGATCGTCTACTCGCCCTCGCCGA
GGAACAGCAGCTGCAGGTACGCGGCACCGATGGCGGCGAGCTGTCCACCG
TGGAAGATGGTGTCATGGACATATCAAATAAGAGGAAGCTTGGTTTCACC
GAGTTCGAACTGGTCAAAACTCTGCAGGATGGCGTTGTGACCCTGATTAA
CGCAGAGGAAGAGCTCGAAATATCCGGACAGGAGGGTTAGAAGCTTTCTA
GACCAT
BS14867.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:15:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4546-RA | 1374 | CG4546-PA | 1..1374 | 17..1390 | 6870 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:15:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4546-RA | 1773 | CG4546-RA | 247..1622 | 17..1392 | 6880 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:15:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15847170..15848285 | 277..1392 | 5580 | 100 | Plus |
| 3R | 32079331 | 3R | 15846854..15847105 | 25..276 | 1260 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:15:54 has no hits.
BS14867.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:34:32 Download gff for
BS14867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4546-RA | 1..1374 | 17..1390 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:07:16 Download gff for
BS14867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4546-RA | 273..1648 | 17..1392 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:48:41 Download gff for
BS14867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4546-RA | 273..1646 | 17..1390 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:34:32 Download gff for
BS14867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4546-RA | 273..1648 | 17..1392 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:17:18 Download gff for
BS14867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4546-RA | 247..1620 | 17..1390 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:17:18 Download gff for
BS14867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15846849..15847105 | 21..276 | 99 | -> | Plus |
| 3R | 15847170..15848283 | 277..1390 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:48:41 Download gff for
BS14867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11672571..11672827 | 21..276 | 99 | -> | Plus |
| arm_3R | 11672892..11674005 | 277..1390 | 100 | | Plus |
BS14867.pep Sequence
Translation from 16 to 1389
> BS14867.pep
MTSIESKRVQYRKYLERAGVIDALSKALIKLYEEQNKPEDAIRFVRKFMC
ESCPDDAQYDVMKNDLEEAKTHISKLEQELERLRGQIKKSPEEYQELTTE
GYKSLMDDEENVSSLLRKYLTPELLEEYMLVTTPAPVDAYLYDCAVSGFE
HHDAPVGIFAADADSYDVFNKLFDPIIKDYHGQMDNENDVLQKDPDFGNV
DEIENLDPERKYILSARIRLARNIEGLPFFPKLTEKQFIEVEEKVRSATE
TMDGELIGSYLTMADIDAETQAEMVKRHILFQRGDEKLTTAGCYRFWPTG
RGVYHNPAETFLIWVNRQDHVHIMSMAQCGDLGDVYNRLVNGLTELEKTL
AFARHPRYGNLTACPTNLGTTLRASVHIRLPLLSKDPDRLLALAEEQQLQ
VRGTDGGELSTVEDGVMDISNKRKLGFTEFELVKTLQDGVVTLINAEEEL
EISGQEG*
BS14867.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:00:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4546-PA | 457 | CG4546-PA | 1..457 | 1..457 | 2369 | 100 | Plus |
| Argk-PG | 356 | CG32031-PG | 12..356 | 100..450 | 806 | 46.5 | Plus |
| Argk-PH | 356 | CG32031-PH | 12..356 | 100..450 | 806 | 46.5 | Plus |
| Argk-PD | 356 | CG32031-PD | 12..356 | 100..450 | 806 | 46.5 | Plus |
| Argk-PE | 375 | CG32031-PE | 31..375 | 100..450 | 806 | 46.5 | Plus |
