Clone BS14881 Report

Search the DGRC for BS14881

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:148
Well:81
Vector:pDNR-Dual
Associated Gene/TranscriptCG10343-RA
Protein status:BS14881.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14881.3prime Sequence

675 bp (675 high quality bases) assembled on 2006-10-13

> BS14881.3prime
ATGGTCTAGAAAGCTTTTAGTTGTTCAGGGGGTGGAGAGCTGGAGCGTTG
GACGCTGCAATTTCGGCGGCAGTGAGAGAATCATCGTTTTTCCCACCCGT
CTGCGATAAATGCTTGACGAGGTCCACCCAATCCCAGCCACGTTCCCGGT
CTCCTTTGTGATCGGTTCTCTCCCACTGCCGGCGCTTTTGCGCCTTAGTC
AGGTGCTCCTTCTTGGGCTCCTTTTTCTTGGACTCCGCATCGGCATTGGG
ATCGGAGATCTTTAGAGCACCCACGCCATCATCCACTAACGCCACCGTGG
GTGCAGATTCGGGTTGCTCTGCGGTCAATTGCTCCAGGTTGTCCTTAAGG
CATTCGAACAGGGTATAGGTCATGCCACAGCCCAGCCATTGGTCCGCTTC
CGTACTCAGAGCCGTTTGGATCCCTTCCTTGACAGCTGGCAGTAGATTCC
TATTGTAAAACGCGTTCATGTTGATCGCTGGCGCCTCATCGGGGTAATTT
TCGCCCCACTTGAGCTCGACCAAGAACGACTTGTAGTTATCCTCTTCGCC
ATATTTGTACTGAAATGTGACGCTATCTATTTCCTTGAAGTTCGTGTCGC
CCTCGTATATTGACTGCAACGCCTCCCGTTCTTCCGTCTGCTGTTCCAGT
GGCGTGCTCATGTCGACTGATAACT

BS14881.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:54:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG10343-PA 645 CG10343-RA 1..645 661..17 3225 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:28:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG10343-RA 843 CG10343-RA 81..727 661..15 3235 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:28:32
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18703910..18704338 443..15 2145 100 Minus
2L 23513712 2L 18703728..18703837 553..444 550 100 Minus
2L 23513712 2L 18703553..18703660 661..554 540 100 Minus
Blast to na_te.dros performed on 2015-02-10 17:28:35 has no hits.

BS14881.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:57:29 Download gff for BS14881.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10343-PA 1..645 17..661 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:26:02 Download gff for BS14881.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10343-RA 72..727 15..669 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:09:46 Download gff for BS14881.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10343-RA 72..727 15..669 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:09:46 Download gff for BS14881.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 18703544..18703660 554..669 96 -> Minus
2L 18703728..18703837 444..553 100 -> Minus
2L 18703910..18704338 15..443 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:26:02 Download gff for BS14881.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18703544..18703660 554..669 96 -> Minus
arm_2L 18703728..18703837 444..553 100 -> Minus
arm_2L 18703910..18704338 15..443 100   Minus

BS14881.5prime Sequence

675 bp (675 high quality bases) assembled on 2006-10-13

> BS14881.5prime
GAAGTTATCAGTCGACATGAGCACGCCACTGGAACAGCAGACGGAAGAAC
GGGAGGCGTTGCAGTCAATATACGAGGGCGACACGAACTTCAAGGAAATA
GATAGCGTCACATTTCAGTACAAATATGGCGAAGAGGATAACTACAAGTC
GTTCTTGGTCGAGCTCAAGTGGGGCGAAAATTACCCCGATGAGGCGCCAG
CGATCAACATGAACGCGTTTTACAATAGGAATCTACTGCCAGCTGTCAAG
GAAGGGATCCAAACGGCTCTGAGTACGGAAGCGGACCAATGGCTGGGCTG
TGGCATGACCTATACCCTGTTCGAATGCCTTAAGGACAACCTGGAGCAAT
TGACCGCAGAGCAACCCGAATCTGCACCCACGGTGGCGTTAGTGGATGAT
GGCGTGGGTGCTCTAAAGATCTCCGATCCCAATGCCGATGCGGAGTCCAA
GAAAAAGGAGCCCAAGAAGGAGCACCTGACTAAGGCGCAAAAGCGCCGGC
AGTGGGAGAGAACCGATCACAAAGGAGACCGGGAACGTGGCTGGGATTGG
GTGGACCTCGTCAAGCATTTATCGCAGACGGGTGGGAAAAACGATGATTC
TCTCACTGCCGCCGAAATTGCAGCGTCCAACGCTCCAGCTCTCCACCCCC
TGAACAACTAAAAGCTTTCTAGACC

BS14881.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:54:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG10343-PA 645 CG10343-RA 1..645 17..661 3225 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:52:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG10343-RA 843 CG10343-RA 81..727 17..663 3235 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:52:49
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18703910..18704338 235..663 2145 100 Plus
2L 23513712 2L 18703728..18703837 125..234 550 100 Plus
2L 23513712 2L 18703553..18703660 17..124 540 100 Plus
Blast to na_te.dros performed on 2015-02-03 06:52:52 has no hits.

BS14881.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:57:29 Download gff for BS14881.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10343-PA 1..645 17..661 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:32:48 Download gff for BS14881.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10343-RA 72..727 9..663 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:40:16 Download gff for BS14881.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10343-RA 72..727 9..663 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:40:16 Download gff for BS14881.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 18703544..18703660 9..124 96 -> Plus
2L 18703728..18703837 125..234 100 -> Plus
2L 18703910..18704338 235..663 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:32:48 Download gff for BS14881.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18703910..18704338 235..663 100   Plus
arm_2L 18703544..18703660 9..124 96 -> Plus
arm_2L 18703728..18703837 125..234 100 -> Plus

BS14881.complete Sequence

677 bp assembled on 2006-11-01

> BS14881.complete
GAAGTTATCAGTCGACATGAGCACGCCACTGGAACAGCAGACGGAAGAAC
GGGAGGCGTTGCAGTCAATATACGAGGGCGACACGAACTTCAAGGAAATA
GATAGCGTCACATTTCAGTACAAATATGGCGAAGAGGATAACTACAAGTC
GTTCTTGGTCGAGCTCAAGTGGGGCGAAAATTACCCCGATGAGGCGCCAG
CGATCAACATGAACGCGTTTTACAATAGGAATCTACTGCCAGCTGTCAAG
GAAGGGATCCAAACGGCTCTGAGTACGGAAGCGGACCAATGGCTGGGCTG
TGGCATGACCTATACCCTGTTCGAATGCCTTAAGGACAACCTGGAGCAAT
TGACCGCAGAGCAACCCGAATCTGCACCCACGGTGGCGTTAGTGGATGAT
GGCGTGGGTGCTCTAAAGATCTCCGATCCCAATGCCGATGCGGAGTCCAA
GAAAAAGGAGCCCAAGAAGGAGCACCTGACTAAGGCGCAAAAGCGCCGGC
AGTGGGAGAGAACCGATCACAAAGGAGACCGGGAACGTGGCTGGGATTGG
GTGGACCTCGTCAAGCATTTATCGCAGACGGGTGGGAAAAACGATGATTC
TCTCACTGCCGCCGAAATTGCAGCGTCCAACGCTCCAGCTCTCCACCCCC
TGAACAACTAAAAGCTTTCTAGACCAT

BS14881.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:06:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG10343-RA 645 CG10343-PA 1..645 17..661 3225 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:06:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG10343-RA 843 CG10343-RA 81..727 17..663 3235 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:06:54
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18703910..18704338 235..663 2145 100 Plus
2L 23513712 2L 18703728..18703837 125..234 550 100 Plus
2L 23513712 2L 18703553..18703660 17..124 540 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:06:55 has no hits.

BS14881.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:34:22 Download gff for BS14881.complete
Subject Subject Range Query Range Percent Splice Strand
CG10343-RA 1..645 17..661 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:07:06 Download gff for BS14881.complete
Subject Subject Range Query Range Percent Splice Strand
CG10343-RA 78..733 9..663 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:45:48 Download gff for BS14881.complete
Subject Subject Range Query Range Percent Splice Strand
CG10343-RA 81..723 17..659 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:34:22 Download gff for BS14881.complete
Subject Subject Range Query Range Percent Splice Strand
CG10343-RA 78..733 9..663 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:14:40 Download gff for BS14881.complete
Subject Subject Range Query Range Percent Splice Strand
CG10343-RA 81..723 17..659 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:14:40 Download gff for BS14881.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18703553..18703660 17..124 100 -> Plus
2L 18703728..18703837 125..234 100 -> Plus
2L 18703910..18704334 235..659 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:45:48 Download gff for BS14881.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18703553..18703660 17..124 100 -> Plus
arm_2L 18703728..18703837 125..234 100 -> Plus
arm_2L 18703910..18704334 235..659 100   Plus

BS14881.pep Sequence

Translation from 16 to 660

> BS14881.pep
MSTPLEQQTEEREALQSIYEGDTNFKEIDSVTFQYKYGEEDNYKSFLVEL
KWGENYPDEAPAINMNAFYNRNLLPAVKEGIQTALSTEADQWLGCGMTYT
LFECLKDNLEQLTAEQPESAPTVALVDDGVGALKISDPNADAESKKKEPK
KEHLTKAQKRRQWERTDHKGDRERGWDWVDLVKHLSQTGGKNDDSLTAAE
IAASNAPALHPLNN*

BS14881.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:00:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG10343-PA 214 CG10343-PA 1..214 1..214 1135 100 Plus