Clone BS14892 Report

Search the DGRC for BS14892

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:148
Well:92
Vector:pDNR-Dual
Associated Gene/TranscriptCG10623-RA
Protein status:BS14892.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14892.3prime Sequence

766 bp (718 high quality bases) assembled on 2006-10-13

> BS14892.3prime
ATGGTCTAGAAAGCTTTTACGGCTTTATGTTGAGGCCATCGACGTACTTG
CGGATCGCCAACACGTCCGTCGGATAGACCCGGCAACAGCCGCCAACGAT
GCGCACTCCCAGCTGGATCCACTCGGGCACAAACTTGACCACCTCCTCGC
CGGTTCCAGTCCAATCTCCCTGCTCGACGTCGTAGATCTCGCCGCGATTG
CTGTAGACCACCAGTGGGATGCGATCCGAACCGGCCACTTTGGTAAGCGA
TGATAGCAAAGGGGTCACGAATAGTGGGTTTACACAGTTCAGACCGATCC
CAAGGAGCCGGTTTTCAGCCTTCCGACTTTGGACCAACCGCCAGAGGGAG
AGAGCCGCCTCCGCGAAGTTTTCTCCACTAGCCATGTGCTTTTCATCCAT
GCACTGCAGGGAGACCCAGAATTTGGCATCCGGAAAGTTGTCCAGTACTA
ATTCGGTGACTGCCTCTGCCTCCATCAGACATGGAAGTGTTTCCAGGGCC
AATCCATCCACTCCAGCTGCGAGACAAATCTCAATTCTTGTCTTGTGCCA
CGCCCTCAGCTCCTCCTTGGACATCTTGTCCGCATAGTTGCCGGTGTACT
CAGATCCATCGTGGAGATAGGCGCCATATGGACCTATTGAGCCCATGATC
AGTGGAAGAGCCGACTCCGCTTCAGAACCGATTTCGCTAAGGTACTGTTC
CTTTGCCTGCTTGGCCAGTTGAACGCTCTTTTGGATCAACTCCACACCTC
GTTCTCTGGTCACGCC

BS14892.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:54:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG10623-PA 996 CG10623-RA 247..996 766..17 3725 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:30:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG10623-RC 1725 CG10623-RC 513..1262 766..17 3735 99.9 Minus
CG10623-RB 1494 CG10623-RB 282..1031 766..17 3735 99.9 Minus
CG10623-RA 1583 CG10623-RA 371..1120 766..17 3735 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:30:16
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18955944..18956325 17..398 1895 99.7 Plus
2L 23513712 2L 18956430..18956799 397..766 1850 100 Plus
Blast to na_te.dros performed on 2015-02-10 17:30:20 has no hits.

BS14892.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:57:37 Download gff for BS14892.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10623-PA 247..996 17..766 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:26:27 Download gff for BS14892.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10623-RA 371..1120 17..766 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:09:54 Download gff for BS14892.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10623-RA 371..1120 17..766 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:09:54 Download gff for BS14892.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 18955944..18956324 17..397 99 <- Plus
2L 18956431..18956799 398..766 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:26:27 Download gff for BS14892.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18955944..18956324 17..397 99 <- Plus
arm_2L 18956431..18956799 398..766 100   Plus

BS14892.5prime Sequence

807 bp (694 high quality bases) assembled on 2006-10-13

> BS14892.5prime
GAAGTTATCAGTCGACATGGAAGTGAATCAAAAATGGAACTGGGACACCA
AGCCAATTCTGGTCAAATGCGGAGGATTCTCCTCGCAATTGGCCAAGAAT
GTCACCGAAAAAGTGGACGGTGATCCACTGTGGGGATCGCGATTCGATGC
CACCAATCCGGAAGCTGTGATCCAAACACATCTGGACTTTCTCCGCAACG
GAGCGGATATTATTCTAACCAACACGTATCAGTCCAGCGTCGAGGGATTC
GTGAAGTACCTGGGCGTGACCAGAGAACGAGGTGTGGAGTTGATCCAAAA
GAGCGTTCAACTGGCCAAGCAGGCAAAGGAACAGTACCTTAGCGAAATCG
GTTCTGAAGCGGAGTCGGCTCTTCCACTGATCATGGGCTCAATAGGTCCA
TATGGCGCCTATCTCCACGATGGATCTGAGTACACCGGCAACTATGCGGA
CAAGATGTCCAAGGAGGAGCTGAGGGCGTGGCACAAGACAAGAATTGAGA
TTTGTCTCGCAGCTGGAGTGGATGGATTGGCCCTGGAAACACTTCCATGT
CTGATGGAGGCAGAGGCAGTCACCGAATTAGTACTGGACAACTTTCCGGA
TGCCAAATTCTGGGTCTCCCTGCAGTGCATGGATGAAAAGCACATGGCTA
GTGGAGAAAACTTCGCGGAGGCGGCTCTCTCCCTCTGGCGGTTGGTCCCA
AGTCGGAAGGCTGAAAACCGGCTCCTTGGGATCGGTCTGAACTGTGTAAA
CCCACTATTCGTGACCCCTTTGCTATCATCGCTTACCAAAGGGGCCGGTT
CGGATCG

BS14892.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:54:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG10623-PA 996 CG10623-RA 1..791 17..807 3855 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:56:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG10623-RC 1725 CG10623-RC 264..1057 14..807 3910 99.5 Plus
CG10623-RB 1494 CG10623-RB 33..826 14..807 3910 99.5 Plus
CG10623-RA 1583 CG10623-RA 122..915 14..807 3910 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:56:12
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18956430..18957048 632..14 3080 99.8 Minus
2L 23513712 2L 18956149..18956325 807..631 840 98.3 Minus
Blast to na_te.dros performed on 2015-02-12 17:56:14 has no hits.

BS14892.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:57:37 Download gff for BS14892.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10623-PA 1..791 17..807 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:45:18 Download gff for BS14892.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10623-RA 122..915 14..807 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:53:40 Download gff for BS14892.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10623-RA 122..915 14..807 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 19:53:40 Download gff for BS14892.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 18956149..18956324 632..807 98 <- Minus
2L 18956431..18957048 14..631 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:45:18 Download gff for BS14892.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18956149..18956324 632..807 98 <- Minus
arm_2L 18956431..18957048 14..631 99   Minus

BS14892.complete Sequence

1028 bp assembled on 2006-11-01

GenBank Submission: FJ637824

> BS14892.complete
GAAGTTATCAGTCGACATGGAAGTGAATCAAAAATGGAACTGGGACACCA
AGCCAATTCTGGTCAAATGCGGAGGATTCTCCTCGCAATTGGCCAAGAAT
GTCACCGAAAAAGTGGACGGTGATCCACTGTGGGGATCGCGATTCGATGC
CACCAATCCGGAAGCTGTGATCCAAACACATCTGGACTTTCTCCGCAACG
GAGCGGATATTATTCTAACCAACACGTATCAGTCCAGCGTCGAGGGATTC
GTGAAGTACCTGGGCGTGACCAGAGAACGAGGTGTGGAGTTGATCCAAAA
GAGCGTTCAACTGGCCAAGCAGGCAAAGGAACAGTACCTTAGCGAAATCG
GTTCTGAAGCGGAGTCGGCTCTTCCACTGATCATGGGCTCAATAGGTCCA
TATGGCGCCTATCTCCACGATGGATCTGAGTACACCGGCAACTATGCGGA
CAAGATGTCCAAGGAGGAGCTGAGGGCGTGGCACAAGACAAGAATTGAGA
TTTGTCTCGCAGCTGGAGTGGATGGATTGGCCCTGGAAACACTTCCATGT
CTGATGGAGGCAGAGGCAGTCACCGAATTAGTACTGGACAACTTTCCGGA
TGCCAAATTCTGGGTCTCCCTGCAGTGCATGGATGAAAAGCACATGGCTA
GTGGAGAAAACTTCGCGGAGGCGGCTCTCTCCCTCTGGCGGTTGGTCCAA
AGTCGGAAGGCTGAAAACCGGCTCCTTGGGATCGGTCTGAACTGTGTAAA
CCCACTATTCGTGACCCCTTTGCTATCATCGCTTACCAAAGTGGCCGGTT
CGGATCGCATCCCACTGGTGGTCTACAGCAATCGCGGCGAGATCTACGAC
GTCGAGCAGGGAGATTGGACTGGAACCGGCGAGGAGGTGGTCAAGTTTGT
GCCCGAGTGGATCCAGCTGGGAGTGCGCATCGTTGGCGGCTGTTGCCGGG
TCTATCCGACGGACGTGTTGGCGATCCGCAAGTACGTCGATGGCCTCAAC
ATAAAGCCGTAAAAGCTTTCTAGACCAT

BS14892.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:53:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG10623-RC 996 CG10623-PC 1..996 17..1012 4950 99.8 Plus
CG10623-RB 996 CG10623-PB 1..996 17..1012 4950 99.8 Plus
CG10623-RA 996 CG10623-PA 1..996 17..1012 4950 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:53:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG10623-RC 1725 CG10623-RC 264..1262 14..1012 4965 99.8 Plus
CG10623-RB 1494 CG10623-RB 33..1031 14..1012 4965 99.8 Plus
CG10623-RA 1583 CG10623-RA 122..1120 14..1012 4965 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:53:46
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18956430..18957048 632..14 3080 99.8 Minus
2L 23513712 2L 18955944..18956325 1012..631 1895 99.7 Minus
Blast to na_te.dros performed on 2014-11-27 01:53:47 has no hits.

BS14892.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:34:26 Download gff for BS14892.complete
Subject Subject Range Query Range Percent Splice Strand
CG10623-RA 1..996 17..1012 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:07:12 Download gff for BS14892.complete
Subject Subject Range Query Range Percent Splice Strand
CG10623-RA 122..1120 14..1012 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:04:25 Download gff for BS14892.complete
Subject Subject Range Query Range Percent Splice Strand
CG10623-RA 125..1118 17..1010 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:34:26 Download gff for BS14892.complete
Subject Subject Range Query Range Percent Splice Strand
CG10623-RA 116..1114 14..1012 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:33:52 Download gff for BS14892.complete
Subject Subject Range Query Range Percent Splice Strand
CG10623-RA 125..1118 17..1010 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:33:52 Download gff for BS14892.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18955946..18956324 632..1010 99 <- Minus
2L 18956431..18957045 17..631 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:04:25 Download gff for BS14892.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18955946..18956324 632..1010 99 <- Minus
arm_2L 18956431..18957045 17..631 99   Minus

BS14892.pep Sequence

Translation from 16 to 1011

> BS14892.pep
MEVNQKWNWDTKPILVKCGGFSSQLAKNVTEKVDGDPLWGSRFDATNPEA
VIQTHLDFLRNGADIILTNTYQSSVEGFVKYLGVTRERGVELIQKSVQLA
KQAKEQYLSEIGSEAESALPLIMGSIGPYGAYLHDGSEYTGNYADKMSKE
ELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDNFPDAKFWV
SLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVT
PLLSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDWTGTGEEVVKFVPEWIQ
LGVRIVGGCCRVYPTDVLAIRKYVDGLNIKP*

BS14892.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:12:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG10623-PC 331 CG10623-PC 1..331 1..331 1733 100 Plus
CG10623-PB 331 CG10623-PB 1..331 1..331 1733 100 Plus
CG10623-PA 331 CG10623-PA 1..331 1..331 1733 100 Plus
CG10621-PC 331 CG10621-PC 6..325 14..328 915 53.7 Plus
CG10621-PB 331 CG10621-PB 6..325 14..328 915 53.7 Plus