Clone Sequence Records
BS14893.5prime Sequence
507 bp (507 high quality bases) assembled on 2006-10-13
> BS14893.5prime
GAAGTTATCAGTCGACATGCCGGAACACACTCCAGCTCCGACTCCCCATA
GGGCGGTCTATGGTTTCGCCTTCTATATGCTGTTCACGGTCCTCTTCCTC
GTATACGTGACTTGGGCGCTGCTGCCAGTGGAGTTTGGTCTGCACTCGTA
TCTGCCGGACAAGTATTTTGCCGTATTTGTGCCTTTTCTGGTGCTGGTCT
TCGCCTGGTTCTTTGCCTTCCTCATCTATCCTGCCATAAATCTATCGATG
ACAGTGGATGTTGATTCCATTGCCTCGGTGGTGGATCCAAAGCTGGCACT
GCCCAAGGGGACAGAGTTCACCTCCTGGTCGCAGTTGCAAAAAGGCAAGG
TCAGCCAGGATTCCGCATCAAAGAAGGCCTCTCCAGTGAACTGCAACCTG
TGCAGGACTTTCCACCAACCTGTGACACGTGCACCTATTCCACCACTGCG
TTTTCTGGACCTCCAGGAAGTAAATACAGCGTATTATAACTAAAAGCTTT
CTAGACC
BS14893.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:54:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14550-PA | 477 | CG14550-RA | 1..477 | 17..493 | 2385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 18:45:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42498-RA | 814 | CG42498-RA | 338..814 | 17..493 | 2385 | 100 | Plus |
| CG14550-RA | 814 | CG14550-RA | 338..814 | 17..493 | 2385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 18:45:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26057345..26057823 | 495..17 | 2395 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-02 18:45:35 has no hits.
BS14893.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:57:38 Download gff for
BS14893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14550-PA | 1..477 | 17..493 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:43:52 Download gff for
BS14893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42498-RA | 330..814 | 9..493 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:17:29 Download gff for
BS14893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14550-RA | 330..814 | 9..493 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 19:17:29 Download gff for
BS14893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26057345..26057831 | 9..495 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:43:52 Download gff for
BS14893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21883067..21883553 | 9..495 | 99 | | Minus |
BS14893.3prime Sequence
507 bp (507 high quality bases) assembled on 2006-10-13
> BS14893.3prime
ATGGTCTAGAAAGCTTTTAGTTATAATACGCTGTATTTACTTCCTGGAGG
TCCAGAAAACGCAGTGGTGGAATAGGTGCACGTGTCACAGGTTGGTGGAA
AGTCCTGCACAGGTTGCAGTTCACTGGAGAGGCCTTCTTTGATGCGGAAT
CCTGGCTGACCTTGCCTTTTTGCAACTGCGACCAGGAGGTGAACTCTGTC
CCCTTGGGCAGTGCCAGCTTTGGATCCACCACCGAGGCAATGGAATCAAC
ATCCACTGTCATCGATAGATTTATGGCAGGATAGATGAGGAAGGCAAAGA
ACCAGGCGAAGACCAGCACCAGAAAAGGCACAAATACGGCAAAATACTTG
TCCGGCAGATACGAGTGCAGACCAAACTCCACTGGCAGCAGCGCCCAAGT
CACGTATACGAGGAAGAGGACCGTGAACAGCATATAGAAGGCGAAACCAT
AGACCGCCCTATGGGGAGTCGGAGCTGGAGTGTGTTCCGGCATGTCGACT
GATAACT
BS14893.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:54:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14550-PA | 477 | CG14550-RA | 1..477 | 493..17 | 2385 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:30:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42498-RA | 814 | CG42498-RA | 338..814 | 493..17 | 2385 | 100 | Minus |
| CG14550-RA | 814 | CG14550-RA | 338..814 | 493..17 | 2385 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:30:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26057345..26057823 | 15..493 | 2395 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 17:30:54 has no hits.
BS14893.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:57:38 Download gff for
BS14893.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14550-PA | 1..477 | 17..493 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:26:31 Download gff for
BS14893.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42498-RA | 330..814 | 17..501 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:09:55 Download gff for
BS14893.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14550-RA | 330..814 | 17..501 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:09:55 Download gff for
BS14893.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26057345..26057831 | 15..501 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:26:31 Download gff for
BS14893.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21883067..21883553 | 15..501 | 99 | | Plus |
BS14893.complete Sequence
509 bp assembled on 2006-11-01
GenBank Submission: FJ637825
> BS14893.complete
GAAGTTATCAGTCGACATGCCGGAACACACTCCAGCTCCGACTCCCCATA
GGGCGGTCTATGGTTTCGCCTTCTATATGCTGTTCACGGTCCTCTTCCTC
GTATACGTGACTTGGGCGCTGCTGCCAGTGGAGTTTGGTCTGCACTCGTA
TCTGCCGGACAAGTATTTTGCCGTATTTGTGCCTTTTCTGGTGCTGGTCT
TCGCCTGGTTCTTTGCCTTCCTCATCTATCCTGCCATAAATCTATCGATG
ACAGTGGATGTTGATTCCATTGCCTCGGTGGTGGATCCAAAGCTGGCACT
GCCCAAGGGGACAGAGTTCACCTCCTGGTCGCAGTTGCAAAAAGGCAAGG
TCAGCCAGGATTCCGCATCAAAGAAGGCCTCTCCAGTGAACTGCAACCTG
TGCAGGACTTTCCACCAACCTGTGACACGTGCACCTATTCCACCACTGCG
TTTTCTGGACCTCCAGGAAGTAAATACAGCGTATTATAACTAAAAGCTTT
CTAGACCAT
BS14893.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:20:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14550-RA | 477 | CG14550-PA | 1..477 | 17..493 | 2385 | 100 | Plus |
| CG42498-RA | 336 | CG42498-PA | 302..336 | 17..51 | 175 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:20:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42498-RA | 814 | CG42498-RA | 338..814 | 17..493 | 2385 | 100 | Plus |
| CG14550-RA | 814 | CG14550-RA | 338..814 | 17..493 | 2385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:20:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26057345..26057823 | 495..17 | 2395 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:20:27 has no hits.
BS14893.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:34:27 Download gff for
BS14893.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14550-RA | 1..477 | 17..493 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:07:13 Download gff for
BS14893.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14550-RA | 330..814 | 9..493 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:45:50 Download gff for
BS14893.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42498-RA | 338..812 | 17..491 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:34:27 Download gff for
BS14893.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14550-RA | 330..814 | 9..493 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:05:26 Download gff for
BS14893.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14550-RA | 338..812 | 17..491 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:05:26 Download gff for
BS14893.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26057349..26057823 | 17..491 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:45:50 Download gff for
BS14893.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21883071..21883545 | 17..491 | 100 | | Minus |
BS14893.pep Sequence
Translation from 16 to 492
> BS14893.pep
MPEHTPAPTPHRAVYGFAFYMLFTVLFLVYVTWALLPVEFGLHSYLPDKY
FAVFVPFLVLVFAWFFAFLIYPAINLSMTVDVDSIASVVDPKLALPKGTE
FTSWSQLQKGKVSQDSASKKASPVNCNLCRTFHQPVTRAPIPPLRFLDLQ
EVNTAYYN*
BS14893.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:12:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14550-PA | 158 | CG14550-PA | 1..158 | 1..158 | 841 | 100 | Plus |
