Clone Sequence Records
BS14895.3prime Sequence
591 bp (591 high quality bases) assembled on 2006-10-13
> BS14895.3prime
ATGGTCTAGAAAGCTTTTATTTTGATTTGGGTGCTTCCAGTGCGTCTTCC
GACACCTCCCAGGGCTTCTCATGCCTCTTCTCATCCCAGGGCTGCTCGTT
GGGCAGGCGAGAGGGTTCCTTGAAGGACACCCCATTATCCTGAATGGTTT
GAAGCAGCTTCTGCAGCTTGCTACCCGGTACCGCCTCCACGTTGCAGGTC
ATTTCCGTGATCCCAGACTGCAGGCAGCGCTGTGCGAGCACTCTGCCGAG
ATTTACAAACGCAGATGTGTCGTTGGTCTTGTACAACTGCTGTTTAATGG
CCCATTCCGAGGTGCTGGCACTCAGGATGGTTCCATTCTCAAAGTGCTTG
ACATCGCCGCTGACATAGCGGCCGCTGGTGTTGATTTCCAAAGTGTGCCA
GTAGGAACGACCTGGTTTCTCCAGATGATAGCCTACCGGCTTGTAGGCAA
TGCGTAATCTTTCCAAGTTCCGTGGATTCCGGTTGATCACGTATTCAGTG
CTGGCTTGCGGGGTTGTTAATTCCTTGATTTTGTGCAGTACACGGGCGGA
GGTGAGGGGGCGAGCACTGCGAGACATGTCGACTGATAACT
BS14895.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:54:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12373-PA | 561 | mRpL18-RA | 1..561 | 577..17 | 2805 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:56:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL18-RA | 740 | CG12373-RA | 121..681 | 577..17 | 2805 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:56:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12756554..12757114 | 577..17 | 2805 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 17:56:21 has no hits.
BS14895.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:57:40 Download gff for
BS14895.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12373-PA | 1..561 | 17..577 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:45:20 Download gff for
BS14895.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL18-RA | 121..681 | 17..577 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:54:06 Download gff for
BS14895.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL18-RA | 121..681 | 17..577 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 19:54:06 Download gff for
BS14895.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12756554..12757114 | 17..577 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:45:20 Download gff for
BS14895.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8644059..8644619 | 17..577 | 100 | | Minus |
BS14895.5prime Sequence
591 bp (591 high quality bases) assembled on 2006-10-13
> BS14895.5prime
GAAGTTATCAGTCGACATGTCTCGCAGTGCTCGCCCCCTCACCTCCGCCC
GTGTACTGCACAAAATCAAGGAATTAACAACCCCGCAAGCCAGCACTGAA
TACGTGATCAACCGGAATCCACGGAACTTGGAAAGATTACGCATTGCCTA
CAAGCCGGTAGGCTATCATCTGGAGAAACCAGGTCGTTCCTACTGGCACA
CTTTGGAAATCAACACCAGCGGCCGCTATGTCAGCGGCGATGTCAAGCAC
TTTGAGAATGGAACCATCCTGAGTGCCAGCACCTCGGAATGGGCCATTAA
ACAGCAGTTGTACAAGACCAACGACACATCTGCGTTTGTAAATCTCGGCA
GAGTGCTCGCACAGCGCTGCCTGCAGTCTGGGATCACGGAAATGACCTGC
AACGTGGAGGCGGTACCGGGTAGCAAGCTGCAGAAGCTGCTTCAAACCAT
TCAGGATAATGGGGTGTCCTTCAAGGAACCCTCTCGCCTGCCCAACGAGC
AGCCCTGGGATGAGAAGAGGCATGAGAAGCCCTGGGAGGTGTCGGAAGAC
GCACTGGAAGCACCCAAATCAAAATAAAAGCTTTCTAGACC
BS14895.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:54:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12373-PA | 561 | mRpL18-RA | 1..561 | 17..577 | 2805 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:53:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL18-RA | 740 | CG12373-RA | 121..681 | 17..577 | 2805 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:53:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12756554..12757114 | 17..577 | 2805 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-03 06:53:11 has no hits.
BS14895.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:57:40 Download gff for
BS14895.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12373-PA | 1..561 | 17..577 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:32:52 Download gff for
BS14895.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL18-RA | 121..681 | 17..577 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:40:18 Download gff for
BS14895.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL18-RA | 121..681 | 17..577 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:40:18 Download gff for
BS14895.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12756554..12757114 | 17..577 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:32:52 Download gff for
BS14895.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8644059..8644619 | 17..577 | 100 | | Plus |
BS14895.complete Sequence
593 bp assembled on 2006-11-01
GenBank Submission: FJ637826
> BS14895.complete
GAAGTTATCAGTCGACATGTCTCGCAGTGCTCGCCCCCTCACCTCCGCCC
GTGTACTGCACAAAATCAAGGAATTAACAACCCCGCAAGCCAGCACTGAA
TACGTGATCAACCGGAATCCACGGAACTTGGAAAGATTACGCATTGCCTA
CAAGCCGGTAGGCTATCATCTGGAGAAACCAGGTCGTTCCTACTGGCACA
CTTTGGAAATCAACACCAGCGGCCGCTATGTCAGCGGCGATGTCAAGCAC
TTTGAGAATGGAACCATCCTGAGTGCCAGCACCTCGGAATGGGCCATTAA
ACAGCAGTTGTACAAGACCAACGACACATCTGCGTTTGTAAATCTCGGCA
GAGTGCTCGCACAGCGCTGCCTGCAGTCTGGGATCACGGAAATGACCTGC
AACGTGGAGGCGGTACCGGGTAGCAAGCTGCAGAAGCTGCTTCAAACCAT
TCAGGATAATGGGGTGTCCTTCAAGGAACCCTCTCGCCTGCCCAACGAGC
AGCCCTGGGATGAGAAGAGGCATGAGAAGCCCTGGGAGGTGTCGGAAGAC
GCACTGGAAGCACCCAAATCAAAATAAAAGCTTTCTAGACCAT
BS14895.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:10:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL18-RA | 561 | CG12373-PA | 1..561 | 17..577 | 2805 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:10:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL18-RA | 740 | CG12373-RA | 121..681 | 17..577 | 2805 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:10:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12756554..12757114 | 17..577 | 2805 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:10:32 has no hits.
BS14895.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:34:28 Download gff for
BS14895.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL18-RA | 1..561 | 17..577 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:12:22 Download gff for
BS14895.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL18-RA | 156..716 | 17..577 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:35:41 Download gff for
BS14895.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL18-RA | 121..679 | 17..575 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:34:28 Download gff for
BS14895.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL18-RA | 156..716 | 17..577 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:05:06 Download gff for
BS14895.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL18-RA | 121..679 | 17..575 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:05:06 Download gff for
BS14895.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12756554..12757112 | 17..575 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:35:41 Download gff for
BS14895.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8644059..8644617 | 17..575 | 100 | | Plus |
BS14895.pep Sequence
Translation from 16 to 576
> BS14895.pep
MSRSARPLTSARVLHKIKELTTPQASTEYVINRNPRNLERLRIAYKPVGY
HLEKPGRSYWHTLEINTSGRYVSGDVKHFENGTILSASTSEWAIKQQLYK
TNDTSAFVNLGRVLAQRCLQSGITEMTCNVEAVPGSKLQKLLQTIQDNGV
SFKEPSRLPNEQPWDEKRHEKPWEVSEDALEAPKSK*
BS14895.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:12:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL18-PA | 186 | CG12373-PA | 1..186 | 1..186 | 974 | 100 | Plus |