Clone Sequence Records
BS14910.complete Sequence
377 bp assembled on 2010-02-09
GenBank Submission: KX800164
> BS14910.complete
GAAGTTATCAGTCGACATGGATTGGATCAAAATATTTGTTTCAGGTCTTG
CCCTGCTATTGATTGGGATGGCGCAGTGCTACCCGCAGTTCGATAGCGAA
AACCCCTGGTTGAGGCCTCGGCAACCCACTGAACCTACGATATCTCCGAA
TGCGGGGGGCAGTACCCCGGCCAACGCTGCTCCACCAACCACCCAGTCAC
CGCGCTATTTCGCCTGTTTCCATTCATGCCCGGCCACCAGCGAGTACAAT
CCAATCTGCGGCAGTGATAACGTGAACTACTACAATGAAAACAAGTTCAA
CTGCGCCTTGAACTGCGGCCTAAACATCCGGAAGGTGCACAAGGGAATTT
GTCAGACTTAGAAGCTTTCTAGACCAT
BS14910.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:32:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Kaz1-ORFB-RF | 345 | CG1220-PF | 1..345 | 17..361 | 1725 | 100 | Plus |
Kaz1-ORFB-RE | 345 | CG1220-PE | 1..345 | 17..361 | 1725 | 100 | Plus |
Kaz1-ORFB-RA | 345 | CG1220-PA | 1..345 | 17..361 | 1725 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:32:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Kaz1-ORFB-RF | 1130 | CG1220-RF | 616..964 | 13..361 | 1730 | 99.7 | Plus |
Kaz1-ORFB-RE | 1143 | CG1220-RE | 629..977 | 13..361 | 1730 | 99.7 | Plus |
Kaz1-ORFB-RA | 562 | CG1220-RA | 48..396 | 13..361 | 1730 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:32:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 217490..217775 | 38..323 | 1430 | 100 | Plus |
3L | 28110227 | 3L | 217855..217892 | 324..361 | 190 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:32:30 has no hits.
BS14910.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:12:07 Download gff for
BS14910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Kaz1-ORFB-RF | 620..964 | 17..361 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:01:26 Download gff for
BS14910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Kaz1-ORFB-RA | 52..396 | 17..361 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:09:45 Download gff for
BS14910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Kaz1-ORFB-RF | 620..964 | 17..361 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:31:15 Download gff for
BS14910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Kaz1-ORFB-RA | 52..396 | 17..361 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:31:15 Download gff for
BS14910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 217421..217442 | 17..38 | 100 | -> | Plus |
3L | 217491..217775 | 39..323 | 100 | -> | Plus |
3L | 217855..217892 | 324..361 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:01:26 Download gff for
BS14910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 217421..217442 | 17..38 | 100 | -> | Plus |
arm_3L | 217491..217775 | 39..323 | 100 | -> | Plus |
arm_3L | 217855..217892 | 324..361 | 100 | | Plus |
BS14910.3prime Sequence
375 bp (375 high quality bases) assembled on 2006-10-13
> BS14910.3prime
ATGGTCTAGAAAGCTTCTAAGTCTGACAAATTCCCTTGTGCACCTTCCGG
ATGTTTAGGCCGCAGTTCAAGGCGCAGTTGAACTTGTTTTCATTGTAGTA
GTTCACGTTATCACTGCCGCAGATTGGATTGTACTCGCTGGTGGCCGGGC
ATGAATGGAAACAGGCGAAATAGCGCGGTGACTGGGTGGTTGGTGGAGCA
GCGTTGGCCGGGGTACTGCCCCCCGCATTCGGAGATATCGTAGGTTCAGT
GGGTTGCCGAGGCCTCAACCAGGGGTTTTCGCTATCGAACTGCGGGTAGC
ACTGCGCCATCCCAATCAATAGCAGGGCAAGACCTGAAACAAATATTTTG
ATCCAATCCATGTCGACTGATAACT
BS14910.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:26:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1220-PA | 345 | Kaz1-ORFB-RA | 1..345 | 361..17 | 1725 | 100 | Minus |
CG1220-PE | 345 | Kaz1-ORFB-RE | 1..345 | 361..17 | 1725 | 100 | Minus |
CG1220-PF | 345 | Kaz1-ORFB-RF | 1..345 | 361..17 | 1725 | 100 | Minus |
CG1220-PH | 348 | Kaz1-ORFB-RH | 1..307 | 361..55 | 1535 | 100 | Minus |
CG1220-PC | 294 | Kaz1-ORFB-RC | 1..294 | 310..17 | 1470 | 100 | Minus |
CG1220-PG | 297 | Kaz1-ORFB-RG | 1..256 | 310..55 | 1280 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:09:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Kaz1-ORFB-RF | 1130 | CG1220-RF | 616..964 | 365..17 | 1730 | 99.7 | Minus |
Kaz1-ORFB-RE | 1143 | CG1220-RE | 629..977 | 365..17 | 1730 | 99.7 | Minus |
Kaz1-ORFB-RA | 562 | CG1220-RA | 48..396 | 365..17 | 1730 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:09:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 217490..217775 | 340..55 | 1430 | 100 | Minus |
3L | 28110227 | 3L | 217855..217892 | 54..17 | 190 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 17:09:25 has no hits.
BS14910.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:57:48 Download gff for
BS14910.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1220-PF | 1..345 | 17..361 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 17:10:56 Download gff for
BS14910.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Kaz1-ORFB-RA | 45..399 | 12..370 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:01:51 Download gff for
BS14910.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Kaz1-ORFB-RA | 45..399 | 12..370 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 19:01:51 Download gff for
BS14910.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 217491..217775 | 55..339 | 100 | -> | Minus |
3L | 217855..217895 | 12..54 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 17:10:56 Download gff for
BS14910.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 217491..217775 | 55..339 | 100 | -> | Minus |
arm_3L | 217855..217895 | 12..54 | 93 | | Minus |
BS14910.pep Sequence
Translation from 16 to 360
> BS14910.pep
MDWIKIFVSGLALLLIGMAQCYPQFDSENPWLRPRQPTEPTISPNAGGST
PANAAPPTTQSPRYFACFHSCPATSEYNPICGSDNVNYYNENKFNCALNC
GLNIRKVHKGICQT*
BS14910.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:13:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Kaz1-ORFB-PF | 114 | CG1220-PF | 1..114 | 1..114 | 642 | 100 | Plus |
Kaz1-ORFB-PE | 114 | CG1220-PE | 1..114 | 1..114 | 642 | 100 | Plus |
Kaz1-ORFB-PA | 114 | CG1220-PA | 1..114 | 1..114 | 642 | 100 | Plus |
Kaz1-ORFB-PH | 115 | CG1220-PH | 1..103 | 1..103 | 577 | 99 | Plus |
CG34454-PA | 133 | CG34454-PA | 3..125 | 1..113 | 194 | 38.9 | Plus |