Clone BS14912 Report

Search the DGRC for BS14912

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:149
Well:12
Vector:pDNR-Dual
Associated Gene/TranscriptCG3652-RA
Protein status:BS14912.pep: full length peptide match
Sequenced Size:707

Clone Sequence Records

BS14912.complete Sequence

707 bp assembled on 2010-02-09

GenBank Submission: KX806110

> BS14912.complete
GAAGTTATCAGTCGACATGGATTCCAAACTAGATATGTTCGAGGACGTGA
ACACGTCGCCTTCATTGGAGGGCGACATGTCGATTCCGGGCAAAAGAACC
ACAACTGCAACGTCCGCGAGCGGAGTGCCGGAATACAATACTCTGGATGA
GCCCATCCGCGAGACAGTGCTGAGGGACATTCGGGCCGTAGGCATTAAGT
TCTACCACGTCCTGTACCCCAAGGAGAAGTCCAGTCTGCTACGAGATTGG
GACCTTTGGGGTCCACTGGTGCTGTGCACCTTCATGGCCACCATACTACA
AGGCTCCTCCACCGCCGACAGCATGTCTGACAACGGACCCGAGTTCGCCC
AGGTCTTCGTAATCGTCTGGATAGGTGCAGCCGTAGTCACACTCAACTCC
AAGCTGCTGGGCGGCAATATCTCATTCTTCCAATCCGTCTGCGTGCTGGG
CTACTGCCTTACGCCGGTGGCCATTTCCCTAATTGTGTGCCGGGTAATCC
TGCTTGCCACCCAAACGCGGCTGCTCTTCTTTCTGCGTTTTGTGACCACC
ACCATAGGCTTTGCCTGGGCCACTTACGCTTCCTTTGTTTTCCTGGGTCA
GAGCCAGCCTCCCCATCGAAAACCGCTTGCCGTGTACCCCATCTTTCTGT
TCTTCTTCATCATCTCGTGGTTGGTTCTTTCCCACAATTAGAAGCTTTCT
AGACCAT

BS14912.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:21:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG3652-RA 675 CG3652-PA 1..675 17..691 3375 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:21:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG3652-RA 867 CG3652-RA 87..761 17..691 3375 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:21:00
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4393501..4393715 249..35 1075 100 Minus
2L 23513712 2L 4393262..4393433 420..249 860 100 Minus
2L 23513712 2L 4393042..4393199 578..421 790 100 Minus
2L 23513712 2L 4392876..4392989 691..578 570 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:21:01 has no hits.

BS14912.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:16:44 Download gff for BS14912.complete
Subject Subject Range Query Range Percent Splice Strand
CG3652-RA 1..675 17..691 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:09:18 Download gff for BS14912.complete
Subject Subject Range Query Range Percent Splice Strand
CG3652-RA 25..699 17..691 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:57:24 Download gff for BS14912.complete
Subject Subject Range Query Range Percent Splice Strand
CG3652-RA 87..761 17..691 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:44:21 Download gff for BS14912.complete
Subject Subject Range Query Range Percent Splice Strand
CG3652-RA 25..699 17..691 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:26:20 Download gff for BS14912.complete
Subject Subject Range Query Range Percent Splice Strand
CG3652-RA 87..761 17..691 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:26:20 Download gff for BS14912.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4392876..4392988 579..691 100 <- Minus
2L 4393042..4393199 421..578 100 <- Minus
2L 4393262..4393433 249..420 100 <- Minus
2L 4393502..4393715 35..248 100 <- Minus
2L 4393773..4393790 17..34 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:57:24 Download gff for BS14912.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4392876..4392988 579..691 100 <- Minus
arm_2L 4393042..4393199 421..578 100 <- Minus
arm_2L 4393262..4393433 249..420 100 <- Minus
arm_2L 4393502..4393715 35..248 100 <- Minus
arm_2L 4393773..4393790 17..34 100   Minus

BS14912.5prime Sequence

705 bp (705 high quality bases) assembled on 2006-10-13

> BS14912.5prime
GAAGTTATCAGTCGACATGGATTCCAAACTAGATATGTTCGAGGACGTGA
ACACGTCGCCTTCATTGGAGGGCGACATGTCGATTCCGGGCAAAAGAACC
ACAACTGCAACGTCCGCGAGCGGAGTGCCGGAATACAATACTCTGGATGA
GCCCATCCGCGAGACAGTGCTGAGGGACATTCGGGCCGTAGGCATTAAGT
TCTACCACGTCCTGTACCCCAAGGAGAAGTCCAGTCTGCTACGAGATTGG
GACCTTTGGGGTCCACTGGTGCTGTGCACCTTCATGGCCACCATACTACA
AGGCTCCTCCACCGCCGACAGCATGTCTGACAACGGACCCGAGTTCGCCC
AGGTCTTCGTAATCGTCTGGATAGGTGCAGCCGTAGTCACACTCAACTCC
AAGCTGCTGGGCGGCAATATCTCATTCTTCCAATCCGTCTGCGTGCTGGG
CTACTGCCTTACGCCGGTGGCCATTTCCCTAATTGTGTGCCGGGTAATCC
TGCTTGCCACCCAAACGCGGCTGCTCTTCTTTCTGCGTTTTGTGACCACC
ACCATAGGCTTTGCCTGGGCCACTTACGCTTCCTTTGTTTTCCTGGGTCA
GAGCCAGCCTCCCCATCGAAAACCGCTTGCCGTGTACCCCATCTTTCTGT
TCTTCTTCATCATCTCGTGGTTGGTTCTTTCCCACAATTAGAAGCTTTCT
AGACC

BS14912.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:26:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG3652-PA 675 CG3652-RA 1..675 17..691 3375 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:53:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG3652-RA 867 CG3652-RA 87..761 17..691 3375 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:53:42
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4393501..4393715 249..35 1075 100 Minus
2L 23513712 2L 4393262..4393433 420..249 860 100 Minus
2L 23513712 2L 4393042..4393199 578..421 790 100 Minus
2L 23513712 2L 4392876..4392989 691..578 570 100 Minus
Blast to na_te.dros performed on 2015-02-11 15:53:45 has no hits.

BS14912.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:57:50 Download gff for BS14912.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3652-PA 1..675 17..691 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 20:23:17 Download gff for BS14912.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3652-RA 85..761 13..691 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:22:19 Download gff for BS14912.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3652-RA 85..761 13..691 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:22:19 Download gff for BS14912.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 4392876..4392988 579..691 100 <- Minus
2L 4393042..4393199 421..578 100 <- Minus
2L 4393262..4393433 249..420 100 <- Minus
2L 4393502..4393715 35..248 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 20:23:17 Download gff for BS14912.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4392876..4392988 579..691 100 <- Minus
arm_2L 4393042..4393199 421..578 100 <- Minus
arm_2L 4393262..4393433 249..420 100 <- Minus
arm_2L 4393502..4393715 35..248 100 <- Minus

BS14912.pep Sequence

Translation from 16 to 690

> BS14912.pep
MDSKLDMFEDVNTSPSLEGDMSIPGKRTTTATSASGVPEYNTLDEPIRET
VLRDIRAVGIKFYHVLYPKEKSSLLRDWDLWGPLVLCTFMATILQGSSTA
DSMSDNGPEFAQVFVIVWIGAAVVTLNSKLLGGNISFFQSVCVLGYCLTP
VAISLIVCRVILLATQTRLLFFLRFVTTTIGFAWATYASFVFLGQSQPPH
RKPLAVYPIFLFFFIISWLVLSHN*

BS14912.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:58:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG3652-PA 224 CG3652-PA 1..224 1..224 1161 100 Plus