Clone Sequence Records
BS14915.complete Sequence
1610 bp assembled on 2009-12-07
GenBank Submission: KX803961
> BS14915.complete
GAAGTTATCAGTCGACATGAAGTTGCTACCTCTGGCTTTATTAGCCTTTT
TATTAAGACCGAAACCCAATGACGCGGCGCACATTTTGGGCTTGTTTCAA
CATCCCGGAAAGAGCCACTTTGACTTCTTCCGTCCCATGTTCTTGGCCTT
GGCGGAGAGGGGTCACAACATTAGCATGTATAGCTATTTTCCACTGGAGA
AACCAGTGGCCAACTACACGGATTACGTCTTTCAAGGAATGCCCTTGCTC
ACCGATATTGTGGACTTAAGTAACTTTGAATCCGAATGGAAGCCCCTGGG
ACTGCCGTTCAAGGTGCCCACCTACTTTATGCTTCACGATTGGGGTCTGC
GATCCTGTAAGGTGGCCCTGAACTCACCCCTCATCACCCAACTGCTCAAG
TCCCCCATTCGATATGACGTCATACTCCTGGAACACTTCTCCAACGATTG
CATGGCAGCGGTGGCCCACCTATTGAATGCACCTGTAATCGCATTGAGTA
GCTGTGCGATAATGCCGTGGCACTACAAACGCATGGGAAGTCCGTTCATT
AACCCCATTATGCCCATGAATTTCCTGCCCTACACTGATGAGATGAGTCT
GATCGATCGACTGAATAATTTCTTTCATTTCCACACCGTTAATACTCTGT
ACAACATGATTACCCAACCAGCCACCGATGCCCTGATCGCTGAGAGATTT
GGACCCGGTCTGCCGCCCATCAATGAGATCGTGAAGAATACGAGTCTGAT
GCTGATCAATCAGCATTACGCCCTAACCGGACCACGCCCCTATGCTCCGA
ATGTGATTGAAGTGGGTGGGCTGCAAGTGGGGCCGATAAAACCACTTCCA
CAACACCTGCTAGATCTTCTGGATCGATCTCCCAATGGAGTAATCTATAT
CAGCTGGGGCTCCATGGTAAACAGCAATACACTTCCTTCGGGCAAGCGAA
GTGCGCTTTTCCAAAGCATTTCCCAACTTAAGGAATACAACTTTGTAATG
CGCTGGAAAAGTTTAGAATCTCTGGAAGATAAACAGCCCTCGAACCTCTA
CACTTTCGACTGGCTGCCACAAAGAGATCTTTTGTGTCACCCAAAGATCA
GGGCTTTTATCTCCCATGGCGGACTTTTGGGCACCACGGAGGCGATTCAC
TGTGGAGTTCCCATGCTGGTGACACCTTTCTACGGAGATCAGTTTCTCAA
CTCAGGCGCAGTGAAACAAAGAGGTTTCGGAGTTATCGTTGACTTCAGAG
ACTTCGATTCGAATCACATAACCAGAGGACTTCGTATTATACTTGATAAA
AAATTCGCGGAAAGAGTTAGACGATCCAGCGAAGCATTTCGCCAGCGTCC
CATTCCCCCTATCAAATTGGCCACCTGGTGGATTGAGCATGTCATAAAGT
ATGGGGGAGCTCCACATATCCAAAGTGAAGCCAGACACATAAACTGGATC
GTCTACAATTCCATCGATGTTCTCCTGTTCTGGCTGGGAATCTTATTTCT
ACTGATTGTCGCCCTGCGGAAGCTCATAAAGATATTCAAAACAGCTTTTT
GTCGGGGGAAAATCTCTAGAGATACTAAGACAAAGACGCAATAAAAGCTT
TCTAGACCAT
BS14915.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:43:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17324-RB | 1578 | CG17324-PB | 1..1578 | 17..1594 | 7890 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:43:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17324-RB | 1680 | CG17324-RB | 78..1656 | 17..1595 | 7895 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:43:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18821723..18822171 | 854..1302 | 2245 | 100 | Plus |
2L | 23513712 | 2L | 18820570..18820952 | 272..654 | 1915 | 100 | Plus |
2L | 23513712 | 2L | 18822257..18822549 | 1303..1595 | 1465 | 100 | Plus |
2L | 23513712 | 2L | 18820256..18820510 | 17..271 | 1275 | 100 | Plus |
2L | 23513712 | 2L | 18821012..18821214 | 651..853 | 1000 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:43:52 has no hits.
BS14915.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:16:45 Download gff for
BS14915.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17324-RA | 1..1578 | 17..1594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:40:54 Download gff for
BS14915.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17324-RA | 71..1646 | 17..1592 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:56:09 Download gff for
BS14915.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17324-RB | 78..1653 | 17..1592 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:40:16 Download gff for
BS14915.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17324-RA | 71..1646 | 17..1592 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:55:31 Download gff for
BS14915.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17324-RB | 78..1653 | 17..1592 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:55:31 Download gff for
BS14915.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18820256..18820510 | 17..271 | 100 | -> | Plus |
2L | 18820570..18820952 | 272..654 | 100 | -> | Plus |
2L | 18821016..18821214 | 655..853 | 100 | -> | Plus |
2L | 18821723..18822171 | 854..1302 | 100 | -> | Plus |
2L | 18822257..18822546 | 1303..1592 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:56:09 Download gff for
BS14915.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18821016..18821214 | 655..853 | 100 | -> | Plus |
arm_2L | 18820256..18820510 | 17..271 | 100 | -> | Plus |
arm_2L | 18820570..18820952 | 272..654 | 100 | -> | Plus |
arm_2L | 18821723..18822171 | 854..1302 | 100 | -> | Plus |
arm_2L | 18822257..18822546 | 1303..1592 | 100 | | Plus |
BS14915.3prime Sequence
790 bp (757 high quality bases) assembled on 2006-10-13
> BS14915.3prime
ATGGTCTAGAAAGCTTTTATTGCGTCTTTGTCTTAGTATCTCTAGAGATT
TTCCCCCGACAAAAAGCTGTTTTGAATATCTTTATGAGCTTCCGCAGGGC
GACAATCAGTAGAAATAAGATTCCCAGCCAGAACAGGAGAACATCGATGG
AATTGTAGACGATCCAGTTTATGTGTCTGGCTTCACTTTGGATATGTGGA
GCTCCCCCATACTTTATGACATGCTCAATCCACCAGGTGGCCAATTTGAT
AGGGGGAATGGGACGCTGGCGAAATGCTTCGCTGGATCGTCTAACTCTTT
CCGCGAATTTTTTATCAAGTATAATACGAAGTCCTCTGGTTATGTGATTC
GAATCGAAGTCTCTGAAGTCAACGATAACTCCGAAACCTCTTTGTTTCAC
TGCGCCTGAGTTGAGAAACTGATCTCCGTAGAAAGGTGTCACCAGCATGG
GAACTCCACAGTGAATCGCCTCCGTGGTGCCCAAAAGTCCGCCATGGGAG
ATAAAAGCCCTGATCTTTGGGTGACACAAAAGATCTCTTTGTGGCAGCCA
GTCGAAAGTGTAGAGGTTCGAGGGCTGTTTATCTTCCAGAGATTCTAAAC
TTTTCCAGCGCATTACAAAGTTGTATTCCTTAAGTTGGGAAATGCTTTGG
AAAAGCGCACTTCGCTTGCCCGAAGGAAGTGTATTGCTGTTTACCATGGA
GCCCCAGCTGATATAGATTACTCCATTGGGAGATCGATCCAGAAGATCTA
GCAGGTGTTGTGGAAGTGGTTTTATCGGGCCCACTTGCAG
BS14915.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:27:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17324-PA | 1578 | CG17324-RA | 805..1578 | 790..17 | 3845 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:57:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17324-RB | 1680 | CG17324-RB | 882..1656 | 790..16 | 3860 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:57:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18821723..18822171 | 757..309 | 2245 | 100 | Minus |
2L | 23513712 | 2L | 18822257..18822549 | 308..16 | 1465 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 15:57:17 has no hits.
BS14915.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:57:52 Download gff for
BS14915.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17324-PA | 805..1578 | 17..790 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 12:55:18 Download gff for
BS14915.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17324-RB | 882..1661 | 10..790 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:24:29 Download gff for
BS14915.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17324-RB | 882..1661 | 10..790 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:24:29 Download gff for
BS14915.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18821182..18821214 | 758..790 | 96 | -> | Minus |
2L | 18821723..18822171 | 309..757 | 100 | -> | Minus |
2L | 18822257..18822554 | 10..308 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 12:55:18 Download gff for
BS14915.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18821182..18821214 | 758..790 | 96 | -> | Minus |
arm_2L | 18821723..18822171 | 309..757 | 100 | -> | Minus |
arm_2L | 18822257..18822554 | 10..308 | 99 | | Minus |
BS14915.5prime Sequence
782 bp (768 high quality bases) assembled on 2006-10-13
> BS14915.5prime
GAAGTTATCAGTCGACATGAAGTTGCTACCTCTGGCTTTATTAGCCTTTT
TATTAAGACCGAAACCCAATGACGCGGCGCACATTTTGGGCTTGTTTCAA
CATCCCGGAAAGAGCCACTTTGACTTCTTCCGTCCCATGTTCTTGGCCTT
GGCGGAGAGGGGTCACAACATTAGCATGTATAGCTATTTTCCACTGGAGA
AACCAGTGGCCAACTACACGGATTACGTCTTTCAAGGAATGCCCTTGCTC
ACCGATATTGTGGACTTAAGTAACTTTGAATCCGAATGGAAGCCCCTGGG
ACTGCCGTTCAAGGTGCCCACCTACTTTATGCTTCACGATTGGGGTCTGC
GATCCTGTAAGGTGGCCCTGAACTCACCCCTCATCACCCAACTGCTCAAG
TCCCCCATTCGATATGACGTCATACTCCTGGAACACTTCTCCAACGATTG
CATGGCAGCGGTGGCCCACCTATTGAATGCACCTGTAATCGCATTGAGTA
GCTGTGCGATAATGCCGTGGCACTACAAACGCATGGGAAGTCCGTTCATT
AACCCCATTATGCCCATGAATTTCCTGCCCTACACTGATGAGATGAGTCT
GATCGATCGACTGAATAATTTCTTTCATTTCCACACCGTTAATACTCTGT
ACAACATGATTACCCAACCAGCCACCGATGCCCTGATCGCTGAGAGATTT
GGACCCGGTCTGCCGCCCATCAATGAGATCGTGAAGAATACGAGTCTGAT
GCTGATCAATCAGCATTACGCCCTAACCGGAC
BS14915.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:27:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17324-PA | 1578 | CG17324-RA | 1..766 | 17..782 | 3830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:53:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17324-RB | 1680 | CG17324-RB | 78..843 | 17..782 | 3830 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:53:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18820570..18820952 | 272..654 | 1915 | 100 | Plus |
2L | 23513712 | 2L | 18820256..18820510 | 17..271 | 1275 | 100 | Plus |
2L | 23513712 | 2L | 18821012..18821143 | 651..782 | 645 | 99.2 | Plus |
Blast to na_te.dros performed on 2015-02-11 15:53:52 has no hits.
BS14915.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:57:52 Download gff for
BS14915.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17324-PA | 1..766 | 17..782 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 20:23:19 Download gff for
BS14915.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17324-RB | 68..843 | 4..782 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:22:35 Download gff for
BS14915.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17324-RB | 68..843 | 4..782 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:22:35 Download gff for
BS14915.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18820243..18820510 | 1..271 | 98 | -> | Plus |
2L | 18820570..18820952 | 272..654 | 100 | -> | Plus |
2L | 18821016..18821143 | 655..782 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 20:23:19 Download gff for
BS14915.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18820243..18820510 | 1..271 | 98 | -> | Plus |
arm_2L | 18820570..18820952 | 272..654 | 100 | -> | Plus |
arm_2L | 18821016..18821143 | 655..782 | 100 | | Plus |
BS14915.pep Sequence
Translation from 16 to 1593
> BS14915.pep
MKLLPLALLAFLLRPKPNDAAHILGLFQHPGKSHFDFFRPMFLALAERGH
NISMYSYFPLEKPVANYTDYVFQGMPLLTDIVDLSNFESEWKPLGLPFKV
PTYFMLHDWGLRSCKVALNSPLITQLLKSPIRYDVILLEHFSNDCMAAVA
HLLNAPVIALSSCAIMPWHYKRMGSPFINPIMPMNFLPYTDEMSLIDRLN
NFFHFHTVNTLYNMITQPATDALIAERFGPGLPPINEIVKNTSLMLINQH
YALTGPRPYAPNVIEVGGLQVGPIKPLPQHLLDLLDRSPNGVIYISWGSM
VNSNTLPSGKRSALFQSISQLKEYNFVMRWKSLESLEDKQPSNLYTFDWL
PQRDLLCHPKIRAFISHGGLLGTTEAIHCGVPMLVTPFYGDQFLNSGAVK
QRGFGVIVDFRDFDSNHITRGLRIILDKKFAERVRRSSEAFRQRPIPPIK
LATWWIEHVIKYGGAPHIQSEARHINWIVYNSIDVLLFWLGILFLLIVAL
RKLIKIFKTAFCRGKISRDTKTKTQ*
BS14915.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:01:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17324-PB | 525 | CG17324-PB | 1..525 | 1..525 | 2794 | 100 | Plus |
CG17323-PD | 519 | CG17323-PD | 30..519 | 23..519 | 1159 | 43.5 | Plus |
CG17323-PC | 519 | CG17323-PC | 30..519 | 23..519 | 1159 | 43.5 | Plus |
CG17323-PE | 519 | CG17323-PE | 30..519 | 23..519 | 1159 | 43.5 | Plus |
CG17323-PA | 519 | CG17323-PA | 30..519 | 23..519 | 1159 | 43.5 | Plus |