Clone Sequence Records
BS14938.3prime Sequence
282 bp (282 high quality bases) assembled on 2006-10-13
> BS14938.3prime
ATGGTCTAGAAAGCTTTCAGCCTCGAAGTCGAAGGGCTGGCGCAGTTGAG
TGGCGGGCTGAGGATGGGCTGCGTTGATCGCCAGTGGTCGGCTGCTTTTC
TAGCTCCGTTAAGTCGTTCTTGTTGGTTGGTTGGTTGGTTGTGTTGCTGT
TGTTGCTGTTGCTGTTGCACTGTGTGTTTCGTATAGGCTGTGTTTTTTTC
CAGCGGTGATGCTTCTGACTGCGCCGGCGACTCGTCCTGCGACGCTCCTG
CGGCGAATCCTGGATCATGTCGACTGATAACT
BS14938.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:54:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31846-PA | 252 | CG31846-RA | 1..252 | 268..17 | 1260 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:22:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42784-RI | 5345 | CG42784-RI | 1341..1592 | 268..17 | 1260 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:22:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13484360..13484611 | 268..17 | 1260 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-31 10:22:26 has no hits.
BS14938.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:58:07 Download gff for
BS14938.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31846-PA | 1..252 | 17..268 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:37:36 Download gff for
BS14938.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42784-RI | 1341..1595 | 13..268 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:46:31 Download gff for
BS14938.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42784-RI | 1341..1595 | 13..268 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:46:31 Download gff for
BS14938.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13484360..13484615 | 12..268 | 98 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:37:36 Download gff for
BS14938.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13484360..13484615 | 12..268 | 98 | -> | Minus |
BS14938.5prime Sequence
282 bp (282 high quality bases) assembled on 2006-10-13
> BS14938.5prime
GAAGTTATCAGTCGACATGATCCAGGATTCGCCGCAGGAGCGTCGCAGGA
CGAGTCGCCGGCGCAGTCAGAAGCATCACCGCTGGAAAAAAACACAGCCT
ATACGAAACACACAGTGCAACAGCAACAGCAACAACAGCAACACAACCAA
CCAACCAACCAACAAGAACGACTTAACGGAGCTAGAAAAGCAGCCGACCA
CTGGCGATCAACGCAGCCCATCCTCAGCCCGCCACTCAACTGCGCCAGCC
CTTCGACTTCGAGGCTGAAAGCTTTCTAGACC
BS14938.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:54:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31846-PA | 252 | CG31846-RA | 1..252 | 17..268 | 1260 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:15:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42784-RI | 5345 | CG42784-RI | 1341..1592 | 17..268 | 1260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:15:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13484360..13484611 | 17..268 | 1260 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 09:15:39 has no hits.
BS14938.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:58:08 Download gff for
BS14938.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31846-PA | 1..252 | 17..268 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 17:04:55 Download gff for
BS14938.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42784-RI | 1341..1595 | 17..272 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:33:25 Download gff for
BS14938.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42784-RI | 1341..1595 | 17..272 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:33:25 Download gff for
BS14938.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13484360..13484614 | 17..272 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 17:04:55 Download gff for
BS14938.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13484360..13484614 | 17..272 | 99 | | Plus |
BS14938.complete Sequence
284 bp assembled on 2006-11-01
GenBank Submission: FJ638864
> BS14938.complete
GAAGTTATCAGTCGACATGATCCAGGATTCGCCGCAGGAGCGTCGCAGGA
CGAGTCGCCGGCGCAGTCAGAAGCATCACCGCTGGAAAAAAACACAGCCT
ATACGAAACACACAGTGCAACAGCAACAGCAACAACAGCAACACAACCAA
CCAACCAACCAACAAGAACGACTTAACGGAGCTAGAAAAGCAGCCGACCA
CTGGCGATCAACGCAGCCCATCCTCAGCCCGCCACTCAACTGCGCCAGCC
CTTCGACTTCGAGGCTGAAAGCTTTCTAGACCAT
BS14938.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 13:04:17 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:04:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42784-RI | 5345 | CG42784-RI | 1341..1592 | 17..268 | 1260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:04:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13484360..13484611 | 17..268 | 1260 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:04:16 has no hits.
BS14938.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:46:41 Download gff for
BS14938.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31846-RA | 1..252 | 17..268 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:34:26 Download gff for
BS14938.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31846-RA | 1334..1588 | 17..272 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:48:21 Download gff for
BS14938.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42784-RI | 1341..1591 | 17..267 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:46:41 Download gff for
BS14938.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31846-RA | 1334..1588 | 17..272 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:10:22 Download gff for
BS14938.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42784-RI | 1341..1591 | 17..267 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:10:22 Download gff for
BS14938.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13484360..13484610 | 17..267 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:48:21 Download gff for
BS14938.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13484360..13484610 | 17..267 | 100 | | Plus |
BS14938.pep Sequence
Translation from 16 to 267
> BS14938.pep
MIQDSPQERRRTSRRRSQKHHRWKKTQPIRNTQCNSNSNNSNTTNQPTNK
NDLTELEKQPTTGDQRSPSSARHSTAPALRLRG*
Sequence BS14938.pep has no blast hits.
