Clone Sequence Records
BS14950.5prime Sequence
429 bp (429 high quality bases) assembled on 2006-10-13
> BS14950.5prime
GAAGTTATCAGTCGACATGGATAGCGTTCCTGCGAATGTTGTGCCTGCGA
AGGAGTCTGGTGGTTTCACCTCACATTGCGTCCACTTGGCGGCGGGTCCC
TCGCAATTCACCGTGCGCGCCCTGAAAATGCAAGGCAGCACCATGCTGAT
CATAAACCCCAAGGGATTGGAGGTTTTCGAGGAGCTAGCGGTGGCCATGC
CCTCTCGCAATCCCGCCAGCAGCCAGTCCCTATCCTCCACAATCCTGGGC
GGACACGGGCAGACCGACTCATCTGTTCTGGCCGCCAAATTGAGTAAACG
CTACTGCCGCCAGTTCTACGTGAGCCTTAATCTCAAACTGGATCGATTAA
TGGGCCCTCTGTTCGAGAAGACGCTAGTCACCTACATGCAAGACCATCTG
GAGCACTTCGCTTGAAAGCTTTCTAGACC
BS14950.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:54:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13319-PA | 399 | CG13319-RA | 1..399 | 17..415 | 1995 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:06:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13319-RB | 687 | CG13319-RB | 46..444 | 17..415 | 1995 | 100 | Plus |
CG13319-RA | 691 | CG13319-RA | 46..444 | 17..415 | 1995 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:06:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12923949..12924347 | 17..415 | 1995 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 04:06:06 has no hits.
BS14950.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:58:17 Download gff for
BS14950.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13319-PA | 1..399 | 17..415 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:34:48 Download gff for
BS14950.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13319-RA | 37..444 | 8..415 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:09:04 Download gff for
BS14950.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13319-RA | 37..444 | 8..415 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:09:04 Download gff for
BS14950.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12923940..12924347 | 8..415 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:34:48 Download gff for
BS14950.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8811445..8811852 | 8..415 | 99 | | Plus |
BS14950.3prime Sequence
429 bp (429 high quality bases) assembled on 2006-10-13
> BS14950.3prime
ATGGTCTAGAAAGCTTTCAAGCGAAGTGCTCCAGATGGTCTTGCATGTAG
GTGACTAGCGTCTTCTCGAACAGAGGGCCCATTAATCGATCCAGTTTGAG
ATTAAGGCTCACGTAGAACTGGCGGCAGTAGCGTTTACTCAATTTGGCGG
CCAGAACAGATGAGTCGGTCTGCCCGTGTCCGCCCAGGATTGTGGAGGAT
AGGGACTGGCTGCTGGCGGGATTGCGAGAGGGCATGGCCACCGCTAGCTC
CTCGAAAACCTCCAATCCCTTGGGGTTTATGATCAGCATGGTGCTGCCTT
GCATTTTCAGGGCGCGCACGGTGAATTGCGAGGGACCCGCCGCCAAGTGG
ACGCAATGTGAGGTGAAACCACCAGACTCCTTCGCAGGCACAACATTCGC
AGGAACGCTATCCATGTCGACTGATAACT
BS14950.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:54:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13319-PA | 399 | CG13319-RA | 1..399 | 415..17 | 1995 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:05:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13319-RB | 687 | CG13319-RB | 46..444 | 415..17 | 1995 | 100 | Minus |
CG13319-RA | 691 | CG13319-RA | 46..444 | 415..17 | 1995 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:05:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12923949..12924347 | 415..17 | 1995 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 04:05:38 has no hits.
BS14950.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:58:17 Download gff for
BS14950.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13319-PA | 1..399 | 17..415 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:34:46 Download gff for
BS14950.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13319-RA | 37..444 | 17..424 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:08:52 Download gff for
BS14950.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13319-RA | 37..444 | 17..424 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:08:52 Download gff for
BS14950.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12923940..12924347 | 17..424 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:34:46 Download gff for
BS14950.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8811445..8811852 | 17..424 | 99 | | Minus |
BS14950.complete Sequence
431 bp assembled on 2006-11-01
GenBank Submission: FJ637838
> BS14950.complete
GAAGTTATCAGTCGACATGGATAGCGTTCCTGCGAATGTTGTGCCTGCGA
AGGAGTCTGGTGGTTTCACCTCACATTGCGTCCACTTGGCGGCGGGTCCC
TCGCAATTCACCGTGCGCGCCCTGAAAATGCAAGGCAGCACCATGCTGAT
CATAAACCCCAAGGGATTGGAGGTTTTCGAGGAGCTAGCGGTGGCCATGC
CCTCTCGCAATCCCGCCAGCAGCCAGTCCCTATCCTCCACAATCCTGGGC
GGACACGGGCAGACCGACTCATCTGTTCTGGCCGCCAAATTGAGTAAACG
CTACTGCCGCCAGTTCTACGTGAGCCTTAATCTCAAACTGGATCGATTAA
TGGGCCCTCTGTTCGAGAAGACGCTAGTCACCTACATGCAAGACCATCTG
GAGCACTTCGCTTGAAAGCTTTCTAGACCAT
BS14950.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:58:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13319-RB | 399 | CG13319-PB | 1..399 | 17..415 | 1995 | 100 | Plus |
CG13319-RA | 399 | CG13319-PA | 1..399 | 17..415 | 1995 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:58:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13319-RB | 687 | CG13319-RB | 46..444 | 17..415 | 1995 | 100 | Plus |
CG13319-RA | 691 | CG13319-RA | 46..444 | 17..415 | 1995 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:58:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12923949..12924347 | 17..415 | 1995 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:58:11 has no hits.
BS14950.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:34:07 Download gff for
BS14950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13319-RA | 1..399 | 17..415 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:06:50 Download gff for
BS14950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13319-RA | 37..444 | 8..415 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:35:22 Download gff for
BS14950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13319-RA | 46..443 | 17..414 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:34:07 Download gff for
BS14950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13319-RA | 37..444 | 8..415 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:41:22 Download gff for
BS14950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13319-RA | 46..443 | 17..414 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:41:22 Download gff for
BS14950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12923949..12924346 | 17..414 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:35:22 Download gff for
BS14950.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8811454..8811851 | 17..414 | 100 | | Plus |
BS14950.pep Sequence
Translation from 16 to 414
> BS14950.pep
MDSVPANVVPAKESGGFTSHCVHLAAGPSQFTVRALKMQGSTMLIINPKG
LEVFEELAVAMPSRNPASSQSLSSTILGGHGQTDSSVLAAKLSKRYCRQF
YVSLNLKLDRLMGPLFEKTLVTYMQDHLEHFA*
BS14950.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:29:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13319-PB | 132 | CG13319-PB | 1..132 | 1..132 | 671 | 100 | Plus |
CG13319-PA | 132 | CG13319-PA | 1..132 | 1..132 | 671 | 100 | Plus |