Clone Sequence Records
BS14965.3prime Sequence
726 bp (726 high quality bases) assembled on 2006-10-13
> BS14965.3prime
ATGGTCTAGAAAGCTTCTATTGTGCGTGCTTTCGACGGCGGGCATCTTCG
AGTTTCTTGAGATACCTAGCAGCCATGCTTAGAATCGAGGGTTCCTCCAC
ATCAGAGAAGTTATAGTAATCGTCCTCATCCAGCTTATTGCAATCCGTGC
TAAGTGGTGGTGAAGGTGTTTGCATCGGTGTGTTGTTGTGGTTGCTGTCG
CCGTACGAGGGAGTACTTTTCACCTGGCTCTCGCGATGTATGGGCATTAC
AGTGATTTTCTGCGCCTTGGTCCTAGACCTTTTAGTCAACTGATCGTCGG
AGGCGAAGGTCACATGCTCTTTGGTGGGATTTTGCCTCTTGCTTCGGCCA
CGTTTGAGATTGGAAACTTTTAGGGAACTAATTGATGTGGCTGGAGCAGC
ATACCTTGCTCCCTTGATTTCCCTATTATCCAAATCCCTTTTCCTTCCAA
CTGAGCTACTGCGCCCCGTCAACGATCCCTTGGTCAAGTGATGGTCCAGA
ATTTTGCTCACCCGCTCCTCAACCATTCGATTAACTGTATCATTCAGCTG
CTCCATCTTCTCGTCCACAACCTCGTTGACCGCCATCCTAATGGCCTCAT
ATATTTCATTCATGTACTTCGATCGTGCATTTTCCGACTGTGAGCGAGGC
CTCAGCTTGTCCAGCACATCCTCGGTGATCAGTGCGAATCGCAGCTTTGT
TGCCTTCGACATGTCGACTGATAACT
BS14965.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:55:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1958-PA | 696 | CG1958-RA | 1..696 | 712..17 | 3480 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:54:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1958-RA | 980 | CG1958-RA | 136..833 | 714..17 | 3490 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:54:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7267039..7267736 | 714..17 | 3490 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-03 06:54:20 has no hits.
BS14965.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:58:28 Download gff for
BS14965.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1958-PA | 1..696 | 17..712 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:33:07 Download gff for
BS14965.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1958-RA | 128..836 | 11..721 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:40:29 Download gff for
BS14965.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1958-RA | 128..836 | 11..721 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:40:29 Download gff for
BS14965.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7267031..7267739 | 11..721 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:33:07 Download gff for
BS14965.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7161064..7161772 | 11..721 | 99 | | Minus |
BS14965.5prime Sequence
726 bp (706 high quality bases) assembled on 2006-10-13
> BS14965.5prime
GAAGTTATCAGTCGACATGTCGAAGGCAACAAAGCTGCGATTCGCACTGA
TCACCGAGGATGTGCTGGACAAGCTGAGGCCTCGCTCACAGTCGGAAAAT
GCACGATCGAAGTACATGAATGAAATATATGAGGCCATTAGGATGGCGGT
CAACGAGGTTGTGGACGAGAAGATGGAGCAGCTGAATGATACAGTTAATC
GAATGGTTGAGGAGCGGGTGAGCAAAATTCTGGACCATCACTTGACCAAG
GGATCGTTGACGGGGCGCAGTAGCTCAGTTGGAAGGAAAAGGGATTTGGA
TAATAGGGAAATCAAGGGAGCAAGGTATGCTGCTCCAGCCACATCAATTA
GTTCCCTAAAAGTTTCCAATCTCAAACGTGGCCGAAGCAAGAGGCAAAAT
CCCACCAAAGAGCATGTGACCTTCGCCTCCGACGATCAGTTGACTAAAAG
GTCTAGGACCAAGGCGCAGAAAATCACTGTAATGCCCATACATCGCGAGA
GCCAGGTGAAAAGTACTCCCTCGTACGGCGACAGCAACCACAACAACACA
CCGATGCAAACACCTTCACCACCACTTAGCACGGATTGCAATAAGCTGGA
TGAGGACGATTACTATAACTTCTCTGATGTGGAGGAACCCTCGATTCTAA
GCATGGCTGCTAGGTATCTCAAGAAACTCGAAGATGCCCGCCGTCGAAAG
CACGCACAATAGAAGCTTTCTAGACC
BS14965.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:55:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1958-PA | 696 | CG1958-RA | 1..696 | 17..712 | 3480 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 18:50:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1958-RA | 980 | CG1958-RA | 136..833 | 15..712 | 3490 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 18:50:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7267039..7267736 | 15..712 | 3490 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 18:50:27 has no hits.
BS14965.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:58:28 Download gff for
BS14965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1958-PA | 1..696 | 17..712 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:44:10 Download gff for
BS14965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1958-RA | 128..836 | 8..718 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:17:57 Download gff for
BS14965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1958-RA | 128..836 | 8..718 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 19:17:57 Download gff for
BS14965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7267031..7267739 | 8..718 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:44:10 Download gff for
BS14965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7161064..7161772 | 8..718 | 99 | | Plus |
BS14965.complete Sequence
728 bp assembled on 2006-11-01
GenBank Submission: FJ637842
> BS14965.complete
GAAGTTATCAGTCGACATGTCGAAGGCAACAAAGCTGCGATTCGCACTGA
TCACCGAGGATGTGCTGGACAAGCTGAGGCCTCGCTCACAGTCGGAAAAT
GCACGATCGAAGTACATGAATGAAATATATGAGGCCATTAGGATGGCGGT
CAACGAGGTTGTGGACGAGAAGATGGAGCAGCTGAATGATACAGTTAATC
GAATGGTTGAGGAGCGGGTGAGCAAAATTCTGGACCATCACTTGACCAAG
GGATCGTTGACGGGGCGCAGTAGCTCAGTTGGAAGGAAAAGGGATTTGGA
TAATAGGGAAATCAAGGGAGCAAGGTATGCTGCTCCAGCCACATCAATTA
GTTCCCTAAAAGTTTCCAATCTCAAACGTGGCCGAAGCAAGAGGCAAAAT
CCCACCAAAGAGCATGTGACCTTCGCCTCCGACGATCAGTTGACTAAAAG
GTCTAGGACCAAGGCGCAGAAAATCACTGTAATGCCCATACATCGCGAGA
GCCAGGTGAAAAGTACTCCCTCGTACGGCGACAGCAACCACAACAACACA
CCGATGCAAACACCTTCACCACCACTTAGCACGGATTGCAATAAGCTGGA
TGAGGACGATTACTATAACTTCTCTGATGTGGAGGAACCCTCGATTCTAA
GCATGGCTGCTAGGTATCTCAAGAAACTCGAAGATGCCCGCCGTCGAAAG
CACGCACAATAGAAGCTTTCTAGACCAT
BS14965.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:04:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1958-RA | 696 | CG1958-PA | 1..696 | 17..712 | 3480 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:04:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1958-RA | 980 | CG1958-RA | 136..833 | 15..712 | 3490 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 17:04:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7267039..7267736 | 15..712 | 3490 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 17:04:13 has no hits.
BS14965.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:34:12 Download gff for
BS14965.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1958-RA | 1..696 | 17..712 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:06:55 Download gff for
BS14965.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1958-RA | 128..836 | 8..718 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:00:49 Download gff for
BS14965.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1958-RA | 138..833 | 17..712 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:34:12 Download gff for
BS14965.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1958-RA | 128..836 | 8..718 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:33:55 Download gff for
BS14965.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1958-RA | 138..833 | 17..712 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:33:55 Download gff for
BS14965.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7267041..7267736 | 17..712 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:00:49 Download gff for
BS14965.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7161074..7161769 | 17..712 | 100 | | Plus |
BS14965.pep Sequence
Translation from 16 to 711
> BS14965.pep
MSKATKLRFALITEDVLDKLRPRSQSENARSKYMNEIYEAIRMAVNEVVD
EKMEQLNDTVNRMVEERVSKILDHHLTKGSLTGRSSSVGRKRDLDNREIK
GARYAAPATSISSLKVSNLKRGRSKRQNPTKEHVTFASDDQLTKRSRTKA
QKITVMPIHRESQVKSTPSYGDSNHNNTPMQTPSPPLSTDCNKLDEDDYY
NFSDVEEPSILSMAARYLKKLEDARRRKHAQ*
BS14965.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:29:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1958-PA | 231 | CG1958-PA | 1..231 | 1..231 | 1170 | 100 | Plus |
