Clone BS14979 Report

Search the DGRC for BS14979

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:149
Well:79
Vector:pDNR-Dual
Associated Gene/TranscriptCyp318a1-RA
Protein status:BS14979.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14979.3prime Sequence

826 bp (733 high quality bases) assembled on 2006-10-13

> BS14979.3prime
ATGGTCTAGAAAGCTTTCAAGTGGACTCCTTTTTTGGCTGAATTGTCAGC
AAGATGTCATCGGCGTTTTTGAACTTTAGCGATATATTTTCGACAAACTG
CAGCTTCTCCAGCTCAAAATCGCTCTGAAAATCAAAGTTCGTTATCAACT
TGACCAGGAAGACCTTCATGATAAAAAGACCATAGCGACGACCAATACAC
GATCGCAGTCCATTGGAGAAGGGCAAAAAGCTGTAGGAGTGTCGACGATC
ACGCTGCCTTCGTTTTTCACCCGATCCCGAATCATTGTGCCCCTTGGACA
GCTGCTCCTCTTCCTGATCGAGAAACCGCTGCGGATCGAATTGCCTGGCG
TTGGCGCCCCACCAACGCTCGTCGCGTTGCATATTAAACGTGTCCAGCAC
AACGATGCTATTTTGTGGCACAATCGTTTCGTGCTGCCTGCCCGCCAGCC
GAAAATCTCGACTAACATGACGCAAATTCATCGGCACGGTGGCCAACAGG
CGCAGCGATTCGCTGACAAAGGCATCGAGATAGCGCAACTGCTGCAACTG
CTCCAAGCCCACTTGGCCAACATCCGGCACCAGTGCCCTAATCTCCGCCA
GCAAACGTCGCTGGCAATCACCCTTGTTGGTGGCCAAGCAGAGCAGGGCC
AGCATTATGCTATTGGATACCGTCTCAAAGGACACCAGTACCATCGACTG
TGCCTCGTCCATGATCTCTTCGAGCGTCATCTCTCCATTGGCGGCCAACT
GAAAGATCTGTTCGATAAAGATGCGCCTCTGCCAGCCGTTAGATGCATCC
TCTCCAGACTTTTCACCGCCAACGGC

BS14979.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:55:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG1786-PA 1611 Cyp318a1-RA 802..1611 826..17 4050 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 17:41:33
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp318a1-RA 1885 CG1786-RA 984..1793 826..17 4050 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 17:41:27
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12034411..12034903 683..191 2465 100 Minus
X 23542271 X 12035015..12035191 193..17 885 100 Minus
X 23542271 X 12034208..12034351 826..683 720 100 Minus
Blast to na_te.dros performed on 2015-02-02 17:41:30 has no hits.

BS14979.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:58:44 Download gff for BS14979.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1786-PA 802..1611 17..826 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 15:39:05 Download gff for BS14979.3prime
Subject Subject Range Query Range Percent Splice Strand
Cyp318a1-RA 984..1801 10..826 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 19:10:38 Download gff for BS14979.3prime
Subject Subject Range Query Range Percent Splice Strand
Cyp318a1-RA 984..1801 10..826 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 19:10:38 Download gff for BS14979.3prime
Subject Subject Range Query Range Percent Splice Strand
X 12034208..12034351 683..826 100 -> Minus
X 12034412..12034901 193..682 100 -> Minus
X 12035016..12035199 10..192 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 15:39:05 Download gff for BS14979.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11928241..11928384 683..826 100 -> Minus
arm_X 11928445..11928934 193..682 100 -> Minus
arm_X 11929049..11929232 10..192 98   Minus

BS14979.5prime Sequence

862 bp (783 high quality bases) assembled on 2006-10-13

> BS14979.5prime
GAAGTTATCAGTCGACATGCACCTGAACATTGCCCTTTGGGCATGCGGCG
CCCTTCTGGCGGTGCTCCTCGCCTGGCAGCAGCGAAAGTGCTGGCGACTC
ATCTGGCAGCTGAACGGATGGCGCGGAGTGATCCAGCAGCCGGTGCTATG
GTTACTACTCTGCATCAATCTGCATCCGAACAGCATACTGGAGAAGGTAT
CCCAATATCGGGTGCACTTCCAGCGACCGCTGGCCGTTCTCGTTGGCACC
CGAGTCCTGCTCTATATCGATGATCCCGCCGGCATGGAGTGCGTTCTCAA
TGCGCCCGAATGCCTGGACAAGACCTTTCTGCAGGATGGCTTCTTTGTTC
GACGCGGTCTGCTCCATGCCAGAGGGCAAAAATGGAAATTGCGCCGCAAG
CAACTGAATCCCGCCTTCAGTCACAATATCGTGGCCAGTTTCTTCGATGT
CTTCAATTCGGTGGGCAATCAGATGGTGGAACAGTTCCAAACGCAGACGA
ATCTTCATGGACAGGCGGTTAAGTTTACGGCTGCCGAGGATTTGCTTAGT
CGAGCTGTACTCGAGGTATCCTGTTTGACCATTATGGGCACTCCAACCAA
TTTCACCCAATTGGATGACGCGCACATTGCCCACAGTTACAAGCGACTAT
TGGAAATCTCCGCCGTTCGCGTGGTGAAGCCATGGCTACAGATTCGCCTT
TTGCATCGCCTATTGGCGCCGGAACTTTACGAGGAGTCCAAAAAGTGCGC
CAAATTGCTGGAGGATTTCGTTGGCGGCATTGTGAGAACAAAGCATCGCA
ATTGGCGGCTAAGGGACGCCGTTGGCGGTGAAAGTCTGGAGAGGATGCAT
CTAACGGCTGGC

BS14979.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:55:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG1786-PA 1611 Cyp318a1-RA 1..817 17..833 4085 100 Plus
CG1786-PA 1611 Cyp318a1-RA 816..847 831..862 160 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:00:00
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp318a1-RA 1885 CG1786-RA 183..1029 17..862 4210 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:59:55
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12034035..12034253 645..862 1045 99.5 Plus
X 23542271 X 12033297..12033500 372..575 1020 100 Plus
X 23542271 X 12033042..12033234 183..375 965 100 Plus
X 23542271 X 12032814..12032980 17..183 835 100 Plus
X 23542271 X 12033902..12033971 576..645 350 100 Plus
Blast to na_te.dros performed on 2015-02-12 10:59:58 has no hits.

BS14979.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:58:44 Download gff for BS14979.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1786-PA 1..847 17..862 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:42:41 Download gff for BS14979.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyp318a1-RA 179..1029 10..862 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:37:15 Download gff for BS14979.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyp318a1-RA 179..1029 10..862 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:37:15 Download gff for BS14979.5prime
Subject Subject Range Query Range Percent Splice Strand
X 12032810..12032979 10..182 98 -> Plus
X 12033042..12033233 183..374 100 -> Plus
X 12033300..12033500 375..575 100 -> Plus
X 12033902..12033971 576..645 100 -> Plus
X 12034036..12034253 646..862 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:42:41 Download gff for BS14979.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11926843..11927012 10..182 98 -> Plus
arm_X 11927075..11927266 183..374 100 -> Plus
arm_X 11927333..11927533 375..575 100 -> Plus
arm_X 11927935..11928004 576..645 100 -> Plus
arm_X 11928069..11928286 646..862 99   Plus

BS14979.complete Sequence

1643 bp assembled on 2006-11-01

GenBank Submission: FJ637846

> BS14979.complete
GAAGTTATCAGTCGACATGCACCTGAACATTGCCCTTTGGGCATGCGGCG
CCCTTCTGGCGGTGCTCCTCGCCTGGCAGCAGCGAAAGTGCTGGCGACTC
ATCTGGCAGCTGAACGGATGGCGCGGAGTGATCCAGCAGCCGGTGCTATG
GTTACTACTCTGCATCAATCTGCATCCGAACAGCATACTGGAGAAGGTAT
CCCAATATCGGGTGCACTTCCAGCGACCGCTGGCCGTTCTCGTTGGCACC
CGAGTCCTGCTCTATATCGATGATCCCGCCGGCATGGAGTGCGTTCTCAA
TGCGCCCGAATGCCTGGACAAGACCTTTCTGCAGGATGGCTTCTTTGTTC
GACGCGGTCTGCTCCATGCCAGAGGGCAAAAATGGAAATTGCGCCGCAAG
CAACTGAATCCCGCCTTCAGTCACAATATCGTGGCCAGTTTCTTCGATGT
CTTCAATTCGGTGGGCAATCAGATGGTGGAACAGTTCCAAACGCAGACGA
ATCTTCATGGACAGGCGGTTAAGTTTACGGCTGCCGAGGATTTGCTTAGT
CGAGCTGTACTCGAGGTATCCTGTTTGACCATTATGGGCACTCCAACCAA
TTTCACCCAATTGGATGACGCGCACATTGCCCACAGTTACAAGCGACTAT
TGGAAATCTCCGCCGTTCGCGTGGTGAAGCCATGGCTACAGATTCGCCTT
TTGCATCGCCTATTGGCGCCGGAACTTTACGAGGAGTCCAAAAAGTGCGC
CAAATTGCTGGAGGATTTCGTTGGCGGCATTGTGAGAACAAAGCATCGCA
ATTGGCGGCTAAGGGACGCCGTTGGCGGTGAAAAGTCTGGAGAGGATGCA
TCTAACGGCTGGCAGAGGCGCATCTTTATCGAACAGATCTTTCAGTTGGC
CGCCAATGGAGAGATGACGCTCGAAGAGATCATGGACGAGGCACAGTCGA
TGGTACTGGTGTCCTTTGAGACGGTATCCAATAGCATAATGCTGGCCCTG
CTCTGCTTGGCCACCAACAAGGGTGATTGCCAGCGACGTTTGCTGGCGGA
GATTAGGGCACTGGTGCCGGATGTTGGCCAAGTGGGCTTGGAGCAGTTGC
AGCAGTTGCGCTATCTCGATGCCTTTGTCAGCGAATCGCTGCGCCTGTTG
GCCACCGTGCCGATGAATTTGCGTCATGTTAGTCGAGATTTTCGGCTGGC
GGGCAGGCAGCACGAAACGATTGTGCCACAAAATAGCATCGTTGTGCTGG
ACACGTTTAATATGCAACGCGACGAGCGTTGGTGGGGCGCCAACGCCAGG
CAATTCGATCCGCAGCGGTTTCTCGATCAGGAAGAGGAGCAGCTGTCCAA
GGGGCACAATGATTCGGGATCGGGTGAAAAACGAAGGCAGCGTGATCGTC
GACACTCCTACAGCTTTTTGCCCTTCTCCAATGGACTGCGATCGTGTATT
GGTCGTCGCTATGGTCTTTTTATCATGAAGGTCTTCCTGGTCAAGTTGAT
AACGAACTTTGATTTTCAGAGCGATTTTGAGCTGGAGAAGCTGCAGTTTG
TCGAAAATATATCGCTAAAGTTCAAAAACGCCGATGACATCTTGCTGACA
ATTCAGCCAAAAAAGGAGTCCACTTGAAAGCTTTCTAGACCAT

BS14979.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:54:04
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp318a1-RA 1611 CG1786-PA 1..1611 17..1627 8055 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:54:05
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp318a1-RA 1885 CG1786-RA 183..1793 17..1627 8055 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:54:03
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12034411..12034903 961..1453 2465 100 Plus
X 23542271 X 12034035..12034351 645..961 1585 100 Plus
X 23542271 X 12033297..12033500 372..575 1020 100 Plus
X 23542271 X 12033042..12033234 183..375 965 100 Plus
X 23542271 X 12035015..12035191 1451..1627 885 100 Plus
X 23542271 X 12032814..12032980 17..183 835 100 Plus
X 23542271 X 12033902..12033971 576..645 350 100 Plus
Blast to na_te.dros performed on 2014-11-27 14:54:03 has no hits.

BS14979.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:33:52 Download gff for BS14979.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp318a1-RA 1..1611 17..1627 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:06:34 Download gff for BS14979.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp318a1-RA 179..1801 10..1634 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:46:43 Download gff for BS14979.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp318a1-RA 183..1792 17..1626 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:33:52 Download gff for BS14979.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp318a1-RA 179..1801 10..1634 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:55:15 Download gff for BS14979.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp318a1-RA 183..1792 17..1626 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:55:15 Download gff for BS14979.complete
Subject Subject Range Query Range Percent Splice Strand
X 12034036..12034351 646..961 100 -> Plus
X 12032814..12032979 17..182 100 -> Plus
X 12033042..12033233 183..374 100 -> Plus
X 12033300..12033500 375..575 100 -> Plus
X 12033902..12033971 576..645 100 -> Plus
X 12034412..12034901 962..1451 100 -> Plus
X 12035016..12035190 1452..1626 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:46:43 Download gff for BS14979.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11926847..11927012 17..182 100 -> Plus
arm_X 11927075..11927266 183..374 100 -> Plus
arm_X 11927333..11927533 375..575 100 -> Plus
arm_X 11927935..11928004 576..645 100 -> Plus
arm_X 11928069..11928384 646..961 100 -> Plus
arm_X 11928445..11928934 962..1451 100 -> Plus
arm_X 11929049..11929223 1452..1626 100   Plus

BS14979.pep Sequence

Translation from 16 to 1626

> BS14979.pep
MHLNIALWACGALLAVLLAWQQRKCWRLIWQLNGWRGVIQQPVLWLLLCI
NLHPNSILEKVSQYRVHFQRPLAVLVGTRVLLYIDDPAGMECVLNAPECL
DKTFLQDGFFVRRGLLHARGQKWKLRRKQLNPAFSHNIVASFFDVFNSVG
NQMVEQFQTQTNLHGQAVKFTAAEDLLSRAVLEVSCLTIMGTPTNFTQLD
DAHIAHSYKRLLEISAVRVVKPWLQIRLLHRLLAPELYEESKKCAKLLED
FVGGIVRTKHRNWRLRDAVGGEKSGEDASNGWQRRIFIEQIFQLAANGEM
TLEEIMDEAQSMVLVSFETVSNSIMLALLCLATNKGDCQRRLLAEIRALV
PDVGQVGLEQLQQLRYLDAFVSESLRLLATVPMNLRHVSRDFRLAGRQHE
TIVPQNSIVVLDTFNMQRDERWWGANARQFDPQRFLDQEEEQLSKGHNDS
GSGEKRRQRDRRHSYSFLPFSNGLRSCIGRRYGLFIMKVFLVKLITNFDF
QSDFELEKLQFVENISLKFKNADDILLTIQPKKEST*

BS14979.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:29:46
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp318a1-PA 536 CG1786-PA 1..536 1..536 2784 100 Plus
Cyp313b1-PB 502 CG9716-PB 20..493 20..521 623 29.2 Plus
Cyp313b1-PA 502 CG9716-PA 20..493 20..521 623 29.2 Plus
Cyp313a2-PB 493 CG10094-PB 7..486 7..525 505 28.2 Plus
Cyp313a4-PA 494 CG6802-PA 2..493 3..532 473 27.1 Plus