Clone Sequence Records
BS14986.3prime Sequence
453 bp (453 high quality bases) assembled on 2006-10-13
> BS14986.3prime
ATGGTCTAGAAAGCTTCTAATCAACGATGGTCATTCCCATACGATCAGTG
ATATAGGACTTGACTGCTTCGAGTGCAACCTCTTGCACATGCCGGTTATT
TAGTATTAGTCTTGCGACATCTCGAACGCGTACATTTCTAACTTCGGATA
TGGCCCTGATCACGTGCTGCTCCAGTTCTCGACGCTGACTCTCCGTCAAA
TCGTTCAAAATGACCTCACTTAGAGATTTGAAATTTCCCTCCGTAAGTCC
GTAGGCGGTGAGACCACCGATGGCCCCGCCCAGTGCCAGTCCCCGGGGGC
CCAGCAGTAGTCCTCCGATCAGCGCAGCGCCAGCACAAATTGCAGCTCCC
TTGCCGGCCTCCTTGATGGTCAACTGGATATTTTTATCGTCGGCCAGTAT
AGCCAGGGCATTGATTATCTCTGAGATGGCTGAATCCATGTCGACTGATA
ACT
BS14986.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:55:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11671-PA | 423 | CG11671-RA | 1..423 | 439..17 | 2115 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:00:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11671-RA | 681 | CG11671-RA | 164..586 | 439..17 | 2115 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:00:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8288297..8288518 | 238..17 | 1110 | 100 | Minus |
3R | 32079331 | 3R | 8288039..8288241 | 439..237 | 1015 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 11:00:39 has no hits.
BS14986.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:58:49 Download gff for
BS14986.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11671-PA | 1..423 | 17..439 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:42:50 Download gff for
BS14986.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11671-RA | 164..597 | 5..439 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:39:32 Download gff for
BS14986.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11671-RA | 164..597 | 5..439 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:39:32 Download gff for
BS14986.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8288039..8288240 | 238..439 | 100 | -> | Minus |
3R | 8288298..8288529 | 5..237 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:42:50 Download gff for
BS14986.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4113761..4113962 | 238..439 | 100 | -> | Minus |
arm_3R | 4114020..4114251 | 5..237 | 97 | | Minus |
BS14986.5prime Sequence
453 bp (453 high quality bases) assembled on 2006-10-13
> BS14986.5prime
GAAGTTATCAGTCGACATGGATTCAGCCATCTCAGAGATAATCAATGCCC
TGGCTATACTGGCCGACGATAAAAATATCCAGTTGACCATCAAGGAGGCC
GGCAAGGGAGCTGCAATTTGTGCTGGCGCTGCGCTGATCGGAGGACTACT
GCTGGGCCCCCGGGGACTGGCACTGGGCGGGGCCATCGGTGGTCTCACCG
CCTACGGACTTACGGAGGGAAATTTCAAATCTCTAAGTGAGGTCATTTTG
AACGATTTGACGGAGAGTCAGCGTCGAGAACTGGAGCAGCACGTGATCAG
GGCCATATCCGAAGTTAGAAATGTACGCGTTCGAGATGTCGCAAGACTAA
TACTAAATAACCGGCATGTGCAAGAGGTTGCACTCGAAGCAGTCAAGTCC
TATATCACTGATCGTATGGGAATGACCATCGTTGATTAGAAGCTTTCTAG
ACC
BS14986.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:55:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11671-PA | 423 | CG11671-RA | 1..423 | 17..439 | 2115 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:56:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11671-RA | 681 | CG11671-RA | 164..586 | 17..439 | 2115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:56:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8288297..8288518 | 218..439 | 1110 | 100 | Plus |
3R | 32079331 | 3R | 8288039..8288241 | 17..219 | 1015 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 20:56:10 has no hits.
BS14986.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:58:50 Download gff for
BS14986.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11671-PA | 1..423 | 17..439 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 08:08:38 Download gff for
BS14986.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11671-RA | 164..597 | 17..451 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:32:28 Download gff for
BS14986.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11671-RA | 164..597 | 17..451 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:32:28 Download gff for
BS14986.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8288039..8288240 | 17..218 | 100 | -> | Plus |
3R | 8288298..8288529 | 219..451 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 08:08:38 Download gff for
BS14986.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4113761..4113962 | 17..218 | 100 | -> | Plus |
arm_3R | 4114020..4114251 | 219..451 | 97 | | Plus |
BS14986.complete Sequence
455 bp assembled on 2006-11-01
GenBank Submission: FJ637848
> BS14986.complete
GAAGTTATCAGTCGACATGGATTCAGCCATCTCAGAGATAATCAATGCCC
TGGCTATACTGGCCGACGATAAAAATATCCAGTTGACCATCAAGGAGGCC
GGCAAGGGAGCTGCAATTTGTGCTGGCGCTGCGCTGATCGGAGGACTACT
GCTGGGCCCCCGGGGACTGGCACTGGGCGGGGCCATCGGTGGTCTCACCG
CCTACGGACTTACGGAGGGAAATTTCAAATCTCTAAGTGAGGTCATTTTG
AACGATTTGACGGAGAGTCAGCGTCGAGAACTGGAGCAGCACGTGATCAG
GGCCATATCCGAAGTTAGAAATGTACGCGTTCGAGATGTCGCAAGACTAA
TACTAAATAACCGGCATGTGCAAGAGGTTGCACTCGAAGCAGTCAAGTCC
TATATCACTGATCGTATGGGAATGACCATCGTTGATTAGAAGCTTTCTAG
ACCAT
BS14986.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:33:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11671-RA | 423 | CG11671-PA | 1..423 | 17..439 | 2115 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:33:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11671-RA | 681 | CG11671-RA | 164..586 | 17..439 | 2115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:33:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8288297..8288518 | 218..439 | 1110 | 100 | Plus |
3R | 32079331 | 3R | 8288039..8288241 | 17..219 | 1015 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:33:02 has no hits.
BS14986.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:09:12 Download gff for
BS14986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11671-RA | 1..423 | 17..439 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:56:47 Download gff for
BS14986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11671-RA | 101..534 | 17..451 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:54:28 Download gff for
BS14986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11671-RA | 164..586 | 17..439 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:09:12 Download gff for
BS14986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11671-RA | 101..534 | 17..451 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:22:28 Download gff for
BS14986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11671-RA | 164..586 | 17..439 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:22:28 Download gff for
BS14986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8288039..8288240 | 17..218 | 100 | -> | Plus |
3R | 8288298..8288518 | 219..439 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:54:28 Download gff for
BS14986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4113761..4113962 | 17..218 | 100 | -> | Plus |
arm_3R | 4114020..4114240 | 219..439 | 100 | | Plus |
BS14986.pep Sequence
Translation from 16 to 438
> BS14986.pep
MDSAISEIINALAILADDKNIQLTIKEAGKGAAICAGAALIGGLLLGPRG
LALGGAIGGLTAYGLTEGNFKSLSEVILNDLTESQRRELEQHVIRAISEV
RNVRVRDVARLILNNRHVQEVALEAVKSYITDRMGMTIVD*
BS14986.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:21:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11671-PA | 140 | CG11671-PA | 1..140 | 1..140 | 678 | 100 | Plus |
CG3740-PA | 140 | CG3740-PA | 7..140 | 7..140 | 349 | 47.8 | Plus |