Clone BS14986 Report

Search the DGRC for BS14986

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:149
Well:86
Vector:pDNR-Dual
Associated Gene/TranscriptCG11671-RA
Protein status:BS14986.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS14986.3prime Sequence

453 bp (453 high quality bases) assembled on 2006-10-13

> BS14986.3prime
ATGGTCTAGAAAGCTTCTAATCAACGATGGTCATTCCCATACGATCAGTG
ATATAGGACTTGACTGCTTCGAGTGCAACCTCTTGCACATGCCGGTTATT
TAGTATTAGTCTTGCGACATCTCGAACGCGTACATTTCTAACTTCGGATA
TGGCCCTGATCACGTGCTGCTCCAGTTCTCGACGCTGACTCTCCGTCAAA
TCGTTCAAAATGACCTCACTTAGAGATTTGAAATTTCCCTCCGTAAGTCC
GTAGGCGGTGAGACCACCGATGGCCCCGCCCAGTGCCAGTCCCCGGGGGC
CCAGCAGTAGTCCTCCGATCAGCGCAGCGCCAGCACAAATTGCAGCTCCC
TTGCCGGCCTCCTTGATGGTCAACTGGATATTTTTATCGTCGGCCAGTAT
AGCCAGGGCATTGATTATCTCTGAGATGGCTGAATCCATGTCGACTGATA
ACT

BS14986.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:55:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG11671-PA 423 CG11671-RA 1..423 439..17 2115 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:00:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG11671-RA 681 CG11671-RA 164..586 439..17 2115 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:00:37
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8288297..8288518 238..17 1110 100 Minus
3R 32079331 3R 8288039..8288241 439..237 1015 100 Minus
Blast to na_te.dros performed on 2015-02-12 11:00:39 has no hits.

BS14986.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:58:49 Download gff for BS14986.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11671-PA 1..423 17..439 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:42:50 Download gff for BS14986.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11671-RA 164..597 5..439 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:39:32 Download gff for BS14986.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11671-RA 164..597 5..439 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:39:32 Download gff for BS14986.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 8288039..8288240 238..439 100 -> Minus
3R 8288298..8288529 5..237 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:42:50 Download gff for BS14986.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4113761..4113962 238..439 100 -> Minus
arm_3R 4114020..4114251 5..237 97   Minus

BS14986.5prime Sequence

453 bp (453 high quality bases) assembled on 2006-10-13

> BS14986.5prime
GAAGTTATCAGTCGACATGGATTCAGCCATCTCAGAGATAATCAATGCCC
TGGCTATACTGGCCGACGATAAAAATATCCAGTTGACCATCAAGGAGGCC
GGCAAGGGAGCTGCAATTTGTGCTGGCGCTGCGCTGATCGGAGGACTACT
GCTGGGCCCCCGGGGACTGGCACTGGGCGGGGCCATCGGTGGTCTCACCG
CCTACGGACTTACGGAGGGAAATTTCAAATCTCTAAGTGAGGTCATTTTG
AACGATTTGACGGAGAGTCAGCGTCGAGAACTGGAGCAGCACGTGATCAG
GGCCATATCCGAAGTTAGAAATGTACGCGTTCGAGATGTCGCAAGACTAA
TACTAAATAACCGGCATGTGCAAGAGGTTGCACTCGAAGCAGTCAAGTCC
TATATCACTGATCGTATGGGAATGACCATCGTTGATTAGAAGCTTTCTAG
ACC

BS14986.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:55:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG11671-PA 423 CG11671-RA 1..423 17..439 2115 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:56:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG11671-RA 681 CG11671-RA 164..586 17..439 2115 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:56:08
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8288297..8288518 218..439 1110 100 Plus
3R 32079331 3R 8288039..8288241 17..219 1015 100 Plus
Blast to na_te.dros performed on 2015-02-10 20:56:10 has no hits.

BS14986.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:58:50 Download gff for BS14986.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11671-PA 1..423 17..439 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 08:08:38 Download gff for BS14986.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11671-RA 164..597 17..451 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:32:28 Download gff for BS14986.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11671-RA 164..597 17..451 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:32:28 Download gff for BS14986.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 8288039..8288240 17..218 100 -> Plus
3R 8288298..8288529 219..451 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 08:08:38 Download gff for BS14986.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4113761..4113962 17..218 100 -> Plus
arm_3R 4114020..4114251 219..451 97   Plus

BS14986.complete Sequence

455 bp assembled on 2006-11-01

GenBank Submission: FJ637848

> BS14986.complete
GAAGTTATCAGTCGACATGGATTCAGCCATCTCAGAGATAATCAATGCCC
TGGCTATACTGGCCGACGATAAAAATATCCAGTTGACCATCAAGGAGGCC
GGCAAGGGAGCTGCAATTTGTGCTGGCGCTGCGCTGATCGGAGGACTACT
GCTGGGCCCCCGGGGACTGGCACTGGGCGGGGCCATCGGTGGTCTCACCG
CCTACGGACTTACGGAGGGAAATTTCAAATCTCTAAGTGAGGTCATTTTG
AACGATTTGACGGAGAGTCAGCGTCGAGAACTGGAGCAGCACGTGATCAG
GGCCATATCCGAAGTTAGAAATGTACGCGTTCGAGATGTCGCAAGACTAA
TACTAAATAACCGGCATGTGCAAGAGGTTGCACTCGAAGCAGTCAAGTCC
TATATCACTGATCGTATGGGAATGACCATCGTTGATTAGAAGCTTTCTAG
ACCAT

BS14986.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:33:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG11671-RA 423 CG11671-PA 1..423 17..439 2115 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:33:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG11671-RA 681 CG11671-RA 164..586 17..439 2115 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:33:01
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8288297..8288518 218..439 1110 100 Plus
3R 32079331 3R 8288039..8288241 17..219 1015 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:33:02 has no hits.

BS14986.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:09:12 Download gff for BS14986.complete
Subject Subject Range Query Range Percent Splice Strand
CG11671-RA 1..423 17..439 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:56:47 Download gff for BS14986.complete
Subject Subject Range Query Range Percent Splice Strand
CG11671-RA 101..534 17..451 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:54:28 Download gff for BS14986.complete
Subject Subject Range Query Range Percent Splice Strand
CG11671-RA 164..586 17..439 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:09:12 Download gff for BS14986.complete
Subject Subject Range Query Range Percent Splice Strand
CG11671-RA 101..534 17..451 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:22:28 Download gff for BS14986.complete
Subject Subject Range Query Range Percent Splice Strand
CG11671-RA 164..586 17..439 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:22:28 Download gff for BS14986.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8288039..8288240 17..218 100 -> Plus
3R 8288298..8288518 219..439 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:54:28 Download gff for BS14986.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4113761..4113962 17..218 100 -> Plus
arm_3R 4114020..4114240 219..439 100   Plus

BS14986.pep Sequence

Translation from 16 to 438

> BS14986.pep
MDSAISEIINALAILADDKNIQLTIKEAGKGAAICAGAALIGGLLLGPRG
LALGGAIGGLTAYGLTEGNFKSLSEVILNDLTESQRRELEQHVIRAISEV
RNVRVRDVARLILNNRHVQEVALEAVKSYITDRMGMTIVD*

BS14986.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:21:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG11671-PA 140 CG11671-PA 1..140 1..140 678 100 Plus
CG3740-PA 140 CG3740-PA 7..140 7..140 349 47.8 Plus