Clone Sequence Records
BS15003.complete Sequence
1862 bp assembled on 2009-12-07
GenBank Submission: KX806003
> BS15003.complete
GAAGTTATCAGTCGACATGGCATTCCGCCAGTCGGAGCACGAGATGAGCG
TCACCTCACTCGATTCAAGCGTCGAACTGAGATCGCGTTCGCCATCGCCG
CAGGTCTTCAATCCGCGCAAGCTCCGCTTCGCCGATGATGACTTTGACAA
GGACACGCCCGAGGGAGCGAGTCCGCAGCATCCCCTTCAGCAGCGGCCGA
AGCTATCCTCCGGTGAGGAGCAGCAGCTGGACAGTAAGATAGGCAAAGAA
GGCGGCGACGGGGACGTGTCCATGTCGCCGCCATGCCAAAAGGTGCGGGC
CCTGCGACTCTTTAGCACACCGGCCACTCCAAAGACCATCCTGCAGAAGT
CGACGACGCAGTGCAGCAACCATCTGTCGGCGGCAGCAGCGGCAGTGAAT
GCCTCCAGGCGCAGCGACGACCTCTTCCGCCTGTCAGAGCGCCCGCGATC
TCTGCCACTGCACAACCGCAAACTGCCCACCCAGGACACGGCAAATGTGA
ACCCCTTCACGCCAGATAGCCTCATGGCTCACAATAAGAAGCGCTGTCGC
ACGCAATTCGGACGCGAAAACCTCAACCTGAACGTGAATGCTATGCAAAA
GTATTTGCTCAGTGATGCCTGCGACGACGATGTGACGGAGGAGGCGGGCG
ACTCGATGCGCGAAATCCACCAGCAGGCACCCAAGCGGCTGGCCCTGCAC
GACACGAACATCAGTCGCTTCAAGCGGGAGTTCATGCAAGTCAACGTAAT
CGGCGTTGGCGAGTTCGGTGTGGTGTTCCAATGCGTCAATCGACTAGATG
GCTGCATATATGCGATTAAAAAGAGTAAGAAGCCGGTGGCAGGCAGTTCT
TTCGAAAAGAGAGCCCTGAACGAGGTCTGGGCCCATGCTGTATTGGGCAA
GCACGATAACGTGGTTAGATACTATTCCGCGTGGGCGGAGGACGATCATA
TGCTGATACAGAATGAATTCTGCGATGGTGGCAGCTTGCACGCGCGCATC
CAAGATCATTGTTTGGGTGAGGCAGAGCTAAAGATTGTTCTCATGCATGT
GATAGAGGGCCTACGCTATATTCATTCAAATGACCTGGTGCACATGGATC
TGAAGCCCGAAAACATATTCTCCACCATGAATCCCAATGCACACAAGCTG
GTGGAGGTGCAGCCGCAGCAGACCAAAGATGACGATGGCATGGACAGCGT
CTATGAAGAACTGCGCCATTCAGAGAATCTGGTTACGTACAAGATCGGCG
ACCTGGGACACGTGACCTCCGTTAAGGAACCCTACGTCGAGGAGGGAGAC
TGTCGTTACCTGCCCAAGGAGATCCTTCACGAGGATTATTCGAATCTCTT
CAAGGCCGACATATTTTCCCTGGGCATCACGCTGTTCGAGGCGGCCGGCG
GTGGTCCGCTGCCTAAAAATGGACCCGAATGGCACAACTTGCGAGATGGC
AAGGTGCCGATTCTGCCGAGCCTGAGCAGGGATTTTAACGAGCTCATAGC
CCAGATGATGCATCCTTATCCCGACAAGAGGCCCACTTCGCAGTCTATAT
TCAGTCATCCAATTCTGAGTGCTGTTGACTCCAAGAGCAAGCTGCAGCTC
GGCCTGGAGCTGACCGTGGAGAAGCGCAAGAACGAGATACTGATGAACAA
GCTGAGAGAGGCAAAAAAACAGATTAAACTGCTCGAGCAACGAGTCAATC
TTCTTGCGGTGACTAACAATCCGGACAGTCTGGATGGACAGCGTTGCCTT
CGCAGCTTCACGCGACGCATGCGCACGCCATTCTCCAGCCATGGCAAGTT
CGACAGCATATCCGATCGCAACAAGAACGTTATCACCAATATCTGAAAGC
TTTCTAGACCAT
BS15003.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:00:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Wee1-RB | 1830 | CG4488-PB | 1..1830 | 17..1846 | 9135 | 99.9 | Plus |
Wee1-RA | 1830 | CG4488-PA | 1..1830 | 17..1846 | 9135 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:00:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Wee1-RB | 2652 | CG4488-RB | 212..2041 | 17..1846 | 9135 | 99.9 | Plus |
Wee1-RA | 2399 | CG4488-RA | 212..2041 | 17..1846 | 9135 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:00:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6912184..6912888 | 1560..856 | 3525 | 100 | Minus |
2L | 23513712 | 2L | 6913425..6913927 | 519..17 | 2515 | 100 | Minus |
2L | 23513712 | 2L | 6912945..6913281 | 855..519 | 1685 | 100 | Minus |
2L | 23513712 | 2L | 6911701..6911854 | 1846..1693 | 770 | 100 | Minus |
2L | 23513712 | 2L | 6911949..6912082 | 1694..1561 | 655 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:00:46 has no hits.
BS15003.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:44:23 Download gff for
BS15003.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wee-RA | 211..2039 | 17..1845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:03:35 Download gff for
BS15003.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wee-RA | 212..2040 | 17..1845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:12:13 Download gff for
BS15003.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wee-RA | 211..2039 | 17..1845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:01:55 Download gff for
BS15003.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Wee1-RA | 212..2040 | 17..1845 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:01:55 Download gff for
BS15003.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6911702..6911852 | 1695..1845 | 100 | <- | Minus |
2L | 6911949..6912082 | 1561..1694 | 99 | <- | Minus |
2L | 6912184..6912888 | 856..1560 | 100 | <- | Minus |
2L | 6912945..6913281 | 519..855 | 100 | <- | Minus |
2L | 6913426..6913927 | 17..518 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:03:35 Download gff for
BS15003.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6911702..6911852 | 1695..1845 | 100 | <- | Minus |
arm_2L | 6911949..6912082 | 1561..1694 | 99 | <- | Minus |
arm_2L | 6912184..6912888 | 856..1560 | 100 | <- | Minus |
arm_2L | 6912945..6913281 | 519..855 | 100 | <- | Minus |
arm_2L | 6913426..6913927 | 17..518 | 100 | | Minus |
BS15003.3prime Sequence
821 bp (820 high quality bases) assembled on 2006-10-23
> BS15003.3prime
ATGGTCTAGAAAGCTTTCAGATATTGGTGATAACGTTCTTGTTGCGATCG
GATATGCTGTCGAACTTGCCATGGCTGGAGAATGGCGTGCGCATGCGTCG
CGTGAAGCTGCGAAGGCAACGCTGTCCATCCAGACTGTCCGGATTGTTAG
TCACCGCAAGAAGATTGACTCGTTGCTCGAGCAGTTTAATCTGTTTTTTT
GCCTCTCTCAGCTTGTTCATCAGTATCTCGTTCTTGCGCTTCTCCACGGT
CAGCTCCAGGCCGAGCTGCAGCTTGCTCTTGGAGTCAACAGCACTCAGAA
TTGGATGACTGAATATAGACTGCGAAGTGGGCCTCTTGTCGGGATAAGGA
TGCATCATCTGGGCTATGAGCTCGTTAAAATCCCTGCTCAGGCTCGGCAG
AATCGGCACCTTGCCATCTCGCAAGTTGTGCCATTCGGGTCCATTTTTAG
GCAGCGGACCACCGCCGGCCGCCTCGAACAGCGTGATGCCCAGGGAAAAT
ATGTCGGCCTTGAAGAGATTCGAATAATCCTCGTGAAGGATCTCCTTGGG
CAGGTAACGACAGTCTCCCTCCTCGACGTAGGGTTCCTTAACGGAGGTCA
CGTGTCCCAGGTCGCCGATCTTGTACGTAACCAGATTCTCTGAATGGCGC
AGTTCTTCATAGACGCTGTCCATGCCATCGTCATCTTTGGTCTGCTGCGG
CTGCACCTCCACCAGCTTGTGTGCATTGGGATTCATGGTGGAGAATATGT
TTTCGGGCTTCAGATCCATGTGCACCAGGTCATTTGAATGAATATAGCGT
AGGCCCTCTATCACATGCATG
BS15003.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:12:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4488-PA | 1830 | wee-RA | 1026..1830 | 821..17 | 4000 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:16:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Wee1-RB | 2652 | CG4488-RB | 1237..2047 | 821..12 | 4015 | 99.8 | Minus |
Wee1-RA | 2399 | CG4488-RA | 1237..2047 | 821..12 | 4015 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:16:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6912184..6912702 | 303..821 | 2595 | 100 | Plus |
2L | 23513712 | 2L | 6911701..6911854 | 17..170 | 770 | 100 | Plus |
2L | 23513712 | 2L | 6911949..6912082 | 169..302 | 655 | 99.3 | Plus |
Blast to na_te.dros performed on 2015-02-11 17:16:12 has no hits.
BS15003.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:14:14 Download gff for
BS15003.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wee-PA | 1026..1830 | 17..821 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:46:48 Download gff for
BS15003.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4488-PA | 1026..1830 | 17..821 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:53:41 Download gff for
BS15003.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wee-RA | 1237..2053 | 4..821 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:07:54 Download gff for
BS15003.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Wee1-RA | 1237..2053 | 4..821 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:07:54 Download gff for
BS15003.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6911689..6911852 | 4..168 | 96 | <- | Plus |
2L | 6911949..6912082 | 169..302 | 99 | <- | Plus |
2L | 6912184..6912702 | 303..821 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:53:41 Download gff for
BS15003.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6911689..6911852 | 4..168 | 96 | <- | Plus |
arm_2L | 6911949..6912082 | 169..302 | 99 | <- | Plus |
arm_2L | 6912184..6912702 | 303..821 | 100 | | Plus |
BS15003.5prime Sequence
842 bp (745 high quality bases) assembled on 2006-10-23
> BS15003.5prime
GAAGTTATCCGTCGACATGGCATTCCGCCAGTCGGAGCACGAGATGAGCG
TCACCTCACTCGATTCAAGCGTCGAACTGAGATCGCGTTCGCCATCGCCG
CAGGTCTTCAATCCGCGCAAGCTCCGCTTCGCCGATGATGACTTTGACAA
GGACACGCCCGAGGGAGCGAGTCCGCAGCATCCCCTTCAGCAGCGGCCGA
AGCTATCCTCCGGTGAGGAGCAGCAGCTGGACAGTAAGATAGGCAAAGAA
GGCGGCGACGGGGACGTGTCCATGTCGCCGCCATGCCAAAAGGTGCGGGC
CCTGCGACTCTTTAGCACACCGGCCACTCCAAAGACCATCCTGCAGAAGT
CGACGACGCAGTGCAGCAACCATCTGTCGGCGGCAGCAGCGGCAGTGAAT
GCCTCCAGGCGCAGCGACGACCTCTTCCGCCTGTCAGAGCGCCCGCGATC
TCTGCCACTGCACAACCGCAAACTGCCCACCCAGGACACGGCAAATGTGA
ACCCCTTCACGCCAGATAGCCTCATGGCTCACAATAAGAAGCGCTGTCGC
ACGCAATTCGGACGCGAAAACCTCAACCTGAACGTGAATGCTATGCAAAA
GTATTTGCTCAGTGATGCCTGCGACGACGATGTGACGGAGGAGGCGGGCG
ACTCGATGCGCGAAATCCACCAGCAGGCACCCAAGCGGCTGGCCCTGCAC
GACACGAACATCAGTCGCTTCAAGCGGGAGTTCATGCAAGTCAACGTAAT
CGGCGTTGGCGAGTTCGGTGTGGTGTTCCAATGCGTCAATCGACTAGATG
GCTGCCTATATGCGATTAAAAAGAGTAAGAAGCCGGTGGCAA
BS15003.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:12:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4488-PA | 1830 | wee-RA | 1..825 | 17..841 | 4100 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:21:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Wee1-RB | 2652 | CG4488-RB | 212..1036 | 17..841 | 4110 | 99.9 | Plus |
Wee1-RA | 2399 | CG4488-RA | 212..1036 | 17..841 | 4110 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:21:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6913425..6913927 | 519..17 | 2515 | 100 | Minus |
2L | 23513712 | 2L | 6912959..6913281 | 841..519 | 1600 | 99.7 | Minus |
Blast to na_te.dros performed on 2015-02-12 10:21:56 has no hits.
BS15003.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:14:15 Download gff for
BS15003.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wee-PA | 1..824 | 17..840 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:46:50 Download gff for
BS15003.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4488-PA | 1..824 | 17..840 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:56:19 Download gff for
BS15003.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wee-RA | 212..1035 | 17..840 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:54:56 Download gff for
BS15003.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Wee1-RA | 212..1035 | 17..840 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:54:56 Download gff for
BS15003.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6912960..6913281 | 519..840 | 99 | <- | Minus |
2L | 6913426..6913927 | 17..518 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:56:19 Download gff for
BS15003.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6912960..6913281 | 519..840 | 99 | <- | Minus |
arm_2L | 6913426..6913927 | 17..518 | 100 | | Minus |
BS15003.pep Sequence
Translation from 16 to 1845
> BS15003.pep
MAFRQSEHEMSVTSLDSSVELRSRSPSPQVFNPRKLRFADDDFDKDTPEG
ASPQHPLQQRPKLSSGEEQQLDSKIGKEGGDGDVSMSPPCQKVRALRLFS
TPATPKTILQKSTTQCSNHLSAAAAAVNASRRSDDLFRLSERPRSLPLHN
RKLPTQDTANVNPFTPDSLMAHNKKRCRTQFGRENLNLNVNAMQKYLLSD
ACDDDVTEEAGDSMREIHQQAPKRLALHDTNISRFKREFMQVNVIGVGEF
GVVFQCVNRLDGCIYAIKKSKKPVAGSSFEKRALNEVWAHAVLGKHDNVV
RYYSAWAEDDHMLIQNEFCDGGSLHARIQDHCLGEAELKIVLMHVIEGLR
YIHSNDLVHMDLKPENIFSTMNPNAHKLVEVQPQQTKDDDGMDSVYEELR
HSENLVTYKIGDLGHVTSVKEPYVEEGDCRYLPKEILHEDYSNLFKADIF
SLGITLFEAAGGGPLPKNGPEWHNLRDGKVPILPSLSRDFNELIAQMMHP
YPDKRPTSQSIFSHPILSAVDSKSKLQLGLELTVEKRKNEILMNKLREAK
KQIKLLEQRVNLLAVTNNPDSLDGQRCLRSFTRRMRTPFSSHGKFDSISD
RNKNVITNI*
BS15003.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:54:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Wee1-PB | 609 | CG4488-PB | 1..609 | 1..609 | 3184 | 100 | Plus |
Wee1-PA | 609 | CG4488-PA | 1..609 | 1..609 | 3184 | 100 | Plus |
Myt1-PA | 533 | CG32417-PA | 72..359 | 209..525 | 389 | 30.7 | Plus |
S6kII-PB | 911 | CG17596-PB | 564..869 | 235..543 | 183 | 24.9 | Plus |
S6kII-PA | 911 | CG17596-PA | 564..869 | 235..543 | 183 | 24.9 | Plus |