Clone BS15003 Report

Search the DGRC for BS15003

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:150
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptWee1-RA
Protein status:BS15003.pep: full length peptide match
Sequenced Size:1862

Clone Sequence Records

BS15003.complete Sequence

1862 bp assembled on 2009-12-07

GenBank Submission: KX806003

> BS15003.complete
GAAGTTATCAGTCGACATGGCATTCCGCCAGTCGGAGCACGAGATGAGCG
TCACCTCACTCGATTCAAGCGTCGAACTGAGATCGCGTTCGCCATCGCCG
CAGGTCTTCAATCCGCGCAAGCTCCGCTTCGCCGATGATGACTTTGACAA
GGACACGCCCGAGGGAGCGAGTCCGCAGCATCCCCTTCAGCAGCGGCCGA
AGCTATCCTCCGGTGAGGAGCAGCAGCTGGACAGTAAGATAGGCAAAGAA
GGCGGCGACGGGGACGTGTCCATGTCGCCGCCATGCCAAAAGGTGCGGGC
CCTGCGACTCTTTAGCACACCGGCCACTCCAAAGACCATCCTGCAGAAGT
CGACGACGCAGTGCAGCAACCATCTGTCGGCGGCAGCAGCGGCAGTGAAT
GCCTCCAGGCGCAGCGACGACCTCTTCCGCCTGTCAGAGCGCCCGCGATC
TCTGCCACTGCACAACCGCAAACTGCCCACCCAGGACACGGCAAATGTGA
ACCCCTTCACGCCAGATAGCCTCATGGCTCACAATAAGAAGCGCTGTCGC
ACGCAATTCGGACGCGAAAACCTCAACCTGAACGTGAATGCTATGCAAAA
GTATTTGCTCAGTGATGCCTGCGACGACGATGTGACGGAGGAGGCGGGCG
ACTCGATGCGCGAAATCCACCAGCAGGCACCCAAGCGGCTGGCCCTGCAC
GACACGAACATCAGTCGCTTCAAGCGGGAGTTCATGCAAGTCAACGTAAT
CGGCGTTGGCGAGTTCGGTGTGGTGTTCCAATGCGTCAATCGACTAGATG
GCTGCATATATGCGATTAAAAAGAGTAAGAAGCCGGTGGCAGGCAGTTCT
TTCGAAAAGAGAGCCCTGAACGAGGTCTGGGCCCATGCTGTATTGGGCAA
GCACGATAACGTGGTTAGATACTATTCCGCGTGGGCGGAGGACGATCATA
TGCTGATACAGAATGAATTCTGCGATGGTGGCAGCTTGCACGCGCGCATC
CAAGATCATTGTTTGGGTGAGGCAGAGCTAAAGATTGTTCTCATGCATGT
GATAGAGGGCCTACGCTATATTCATTCAAATGACCTGGTGCACATGGATC
TGAAGCCCGAAAACATATTCTCCACCATGAATCCCAATGCACACAAGCTG
GTGGAGGTGCAGCCGCAGCAGACCAAAGATGACGATGGCATGGACAGCGT
CTATGAAGAACTGCGCCATTCAGAGAATCTGGTTACGTACAAGATCGGCG
ACCTGGGACACGTGACCTCCGTTAAGGAACCCTACGTCGAGGAGGGAGAC
TGTCGTTACCTGCCCAAGGAGATCCTTCACGAGGATTATTCGAATCTCTT
CAAGGCCGACATATTTTCCCTGGGCATCACGCTGTTCGAGGCGGCCGGCG
GTGGTCCGCTGCCTAAAAATGGACCCGAATGGCACAACTTGCGAGATGGC
AAGGTGCCGATTCTGCCGAGCCTGAGCAGGGATTTTAACGAGCTCATAGC
CCAGATGATGCATCCTTATCCCGACAAGAGGCCCACTTCGCAGTCTATAT
TCAGTCATCCAATTCTGAGTGCTGTTGACTCCAAGAGCAAGCTGCAGCTC
GGCCTGGAGCTGACCGTGGAGAAGCGCAAGAACGAGATACTGATGAACAA
GCTGAGAGAGGCAAAAAAACAGATTAAACTGCTCGAGCAACGAGTCAATC
TTCTTGCGGTGACTAACAATCCGGACAGTCTGGATGGACAGCGTTGCCTT
CGCAGCTTCACGCGACGCATGCGCACGCCATTCTCCAGCCATGGCAAGTT
CGACAGCATATCCGATCGCAACAAGAACGTTATCACCAATATCTGAAAGC
TTTCTAGACCAT

BS15003.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:00:47
Subject Length Description Subject Range Query Range Score Percent Strand
Wee1-RB 1830 CG4488-PB 1..1830 17..1846 9135 99.9 Plus
Wee1-RA 1830 CG4488-PA 1..1830 17..1846 9135 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:00:49
Subject Length Description Subject Range Query Range Score Percent Strand
Wee1-RB 2652 CG4488-RB 212..2041 17..1846 9135 99.9 Plus
Wee1-RA 2399 CG4488-RA 212..2041 17..1846 9135 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:00:45
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6912184..6912888 1560..856 3525 100 Minus
2L 23513712 2L 6913425..6913927 519..17 2515 100 Minus
2L 23513712 2L 6912945..6913281 855..519 1685 100 Minus
2L 23513712 2L 6911701..6911854 1846..1693 770 100 Minus
2L 23513712 2L 6911949..6912082 1694..1561 655 99.3 Minus
Blast to na_te.dros performed on 2014-11-28 02:00:46 has no hits.

BS15003.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:44:23 Download gff for BS15003.complete
Subject Subject Range Query Range Percent Splice Strand
wee-RA 211..2039 17..1845 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:03:35 Download gff for BS15003.complete
Subject Subject Range Query Range Percent Splice Strand
wee-RA 212..2040 17..1845 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:12:13 Download gff for BS15003.complete
Subject Subject Range Query Range Percent Splice Strand
wee-RA 211..2039 17..1845 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:01:55 Download gff for BS15003.complete
Subject Subject Range Query Range Percent Splice Strand
Wee1-RA 212..2040 17..1845 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:01:55 Download gff for BS15003.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6911702..6911852 1695..1845 100 <- Minus
2L 6911949..6912082 1561..1694 99 <- Minus
2L 6912184..6912888 856..1560 100 <- Minus
2L 6912945..6913281 519..855 100 <- Minus
2L 6913426..6913927 17..518 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:03:35 Download gff for BS15003.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6911702..6911852 1695..1845 100 <- Minus
arm_2L 6911949..6912082 1561..1694 99 <- Minus
arm_2L 6912184..6912888 856..1560 100 <- Minus
arm_2L 6912945..6913281 519..855 100 <- Minus
arm_2L 6913426..6913927 17..518 100   Minus

BS15003.3prime Sequence

821 bp (820 high quality bases) assembled on 2006-10-23

> BS15003.3prime
ATGGTCTAGAAAGCTTTCAGATATTGGTGATAACGTTCTTGTTGCGATCG
GATATGCTGTCGAACTTGCCATGGCTGGAGAATGGCGTGCGCATGCGTCG
CGTGAAGCTGCGAAGGCAACGCTGTCCATCCAGACTGTCCGGATTGTTAG
TCACCGCAAGAAGATTGACTCGTTGCTCGAGCAGTTTAATCTGTTTTTTT
GCCTCTCTCAGCTTGTTCATCAGTATCTCGTTCTTGCGCTTCTCCACGGT
CAGCTCCAGGCCGAGCTGCAGCTTGCTCTTGGAGTCAACAGCACTCAGAA
TTGGATGACTGAATATAGACTGCGAAGTGGGCCTCTTGTCGGGATAAGGA
TGCATCATCTGGGCTATGAGCTCGTTAAAATCCCTGCTCAGGCTCGGCAG
AATCGGCACCTTGCCATCTCGCAAGTTGTGCCATTCGGGTCCATTTTTAG
GCAGCGGACCACCGCCGGCCGCCTCGAACAGCGTGATGCCCAGGGAAAAT
ATGTCGGCCTTGAAGAGATTCGAATAATCCTCGTGAAGGATCTCCTTGGG
CAGGTAACGACAGTCTCCCTCCTCGACGTAGGGTTCCTTAACGGAGGTCA
CGTGTCCCAGGTCGCCGATCTTGTACGTAACCAGATTCTCTGAATGGCGC
AGTTCTTCATAGACGCTGTCCATGCCATCGTCATCTTTGGTCTGCTGCGG
CTGCACCTCCACCAGCTTGTGTGCATTGGGATTCATGGTGGAGAATATGT
TTTCGGGCTTCAGATCCATGTGCACCAGGTCATTTGAATGAATATAGCGT
AGGCCCTCTATCACATGCATG

BS15003.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:12:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG4488-PA 1830 wee-RA 1026..1830 821..17 4000 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:16:16
Subject Length Description Subject Range Query Range Score Percent Strand
Wee1-RB 2652 CG4488-RB 1237..2047 821..12 4015 99.8 Minus
Wee1-RA 2399 CG4488-RA 1237..2047 821..12 4015 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:16:09
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6912184..6912702 303..821 2595 100 Plus
2L 23513712 2L 6911701..6911854 17..170 770 100 Plus
2L 23513712 2L 6911949..6912082 169..302 655 99.3 Plus
Blast to na_te.dros performed on 2015-02-11 17:16:12 has no hits.

BS15003.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:14:14 Download gff for BS15003.3prime
Subject Subject Range Query Range Percent Splice Strand
wee-PA 1026..1830 17..821 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:46:48 Download gff for BS15003.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4488-PA 1026..1830 17..821 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:53:41 Download gff for BS15003.3prime
Subject Subject Range Query Range Percent Splice Strand
wee-RA 1237..2053 4..821 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:07:54 Download gff for BS15003.3prime
Subject Subject Range Query Range Percent Splice Strand
Wee1-RA 1237..2053 4..821 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:07:54 Download gff for BS15003.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 6911689..6911852 4..168 96 <- Plus
2L 6911949..6912082 169..302 99 <- Plus
2L 6912184..6912702 303..821 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:53:41 Download gff for BS15003.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6911689..6911852 4..168 96 <- Plus
arm_2L 6911949..6912082 169..302 99 <- Plus
arm_2L 6912184..6912702 303..821 100   Plus

BS15003.5prime Sequence

842 bp (745 high quality bases) assembled on 2006-10-23

> BS15003.5prime
GAAGTTATCCGTCGACATGGCATTCCGCCAGTCGGAGCACGAGATGAGCG
TCACCTCACTCGATTCAAGCGTCGAACTGAGATCGCGTTCGCCATCGCCG
CAGGTCTTCAATCCGCGCAAGCTCCGCTTCGCCGATGATGACTTTGACAA
GGACACGCCCGAGGGAGCGAGTCCGCAGCATCCCCTTCAGCAGCGGCCGA
AGCTATCCTCCGGTGAGGAGCAGCAGCTGGACAGTAAGATAGGCAAAGAA
GGCGGCGACGGGGACGTGTCCATGTCGCCGCCATGCCAAAAGGTGCGGGC
CCTGCGACTCTTTAGCACACCGGCCACTCCAAAGACCATCCTGCAGAAGT
CGACGACGCAGTGCAGCAACCATCTGTCGGCGGCAGCAGCGGCAGTGAAT
GCCTCCAGGCGCAGCGACGACCTCTTCCGCCTGTCAGAGCGCCCGCGATC
TCTGCCACTGCACAACCGCAAACTGCCCACCCAGGACACGGCAAATGTGA
ACCCCTTCACGCCAGATAGCCTCATGGCTCACAATAAGAAGCGCTGTCGC
ACGCAATTCGGACGCGAAAACCTCAACCTGAACGTGAATGCTATGCAAAA
GTATTTGCTCAGTGATGCCTGCGACGACGATGTGACGGAGGAGGCGGGCG
ACTCGATGCGCGAAATCCACCAGCAGGCACCCAAGCGGCTGGCCCTGCAC
GACACGAACATCAGTCGCTTCAAGCGGGAGTTCATGCAAGTCAACGTAAT
CGGCGTTGGCGAGTTCGGTGTGGTGTTCCAATGCGTCAATCGACTAGATG
GCTGCCTATATGCGATTAAAAAGAGTAAGAAGCCGGTGGCAA

BS15003.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:12:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG4488-PA 1830 wee-RA 1..825 17..841 4100 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:21:57
Subject Length Description Subject Range Query Range Score Percent Strand
Wee1-RB 2652 CG4488-RB 212..1036 17..841 4110 99.9 Plus
Wee1-RA 2399 CG4488-RA 212..1036 17..841 4110 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:21:55
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6913425..6913927 519..17 2515 100 Minus
2L 23513712 2L 6912959..6913281 841..519 1600 99.7 Minus
Blast to na_te.dros performed on 2015-02-12 10:21:56 has no hits.

BS15003.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:14:15 Download gff for BS15003.5prime
Subject Subject Range Query Range Percent Splice Strand
wee-PA 1..824 17..840 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:46:50 Download gff for BS15003.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4488-PA 1..824 17..840 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:56:19 Download gff for BS15003.5prime
Subject Subject Range Query Range Percent Splice Strand
wee-RA 212..1035 17..840 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:54:56 Download gff for BS15003.5prime
Subject Subject Range Query Range Percent Splice Strand
Wee1-RA 212..1035 17..840 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:54:56 Download gff for BS15003.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 6912960..6913281 519..840 99 <- Minus
2L 6913426..6913927 17..518 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:56:19 Download gff for BS15003.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6912960..6913281 519..840 99 <- Minus
arm_2L 6913426..6913927 17..518 100   Minus

BS15003.pep Sequence

Translation from 16 to 1845

> BS15003.pep
MAFRQSEHEMSVTSLDSSVELRSRSPSPQVFNPRKLRFADDDFDKDTPEG
ASPQHPLQQRPKLSSGEEQQLDSKIGKEGGDGDVSMSPPCQKVRALRLFS
TPATPKTILQKSTTQCSNHLSAAAAAVNASRRSDDLFRLSERPRSLPLHN
RKLPTQDTANVNPFTPDSLMAHNKKRCRTQFGRENLNLNVNAMQKYLLSD
ACDDDVTEEAGDSMREIHQQAPKRLALHDTNISRFKREFMQVNVIGVGEF
GVVFQCVNRLDGCIYAIKKSKKPVAGSSFEKRALNEVWAHAVLGKHDNVV
RYYSAWAEDDHMLIQNEFCDGGSLHARIQDHCLGEAELKIVLMHVIEGLR
YIHSNDLVHMDLKPENIFSTMNPNAHKLVEVQPQQTKDDDGMDSVYEELR
HSENLVTYKIGDLGHVTSVKEPYVEEGDCRYLPKEILHEDYSNLFKADIF
SLGITLFEAAGGGPLPKNGPEWHNLRDGKVPILPSLSRDFNELIAQMMHP
YPDKRPTSQSIFSHPILSAVDSKSKLQLGLELTVEKRKNEILMNKLREAK
KQIKLLEQRVNLLAVTNNPDSLDGQRCLRSFTRRMRTPFSSHGKFDSISD
RNKNVITNI*

BS15003.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:54:33
Subject Length Description Subject Range Query Range Score Percent Strand
Wee1-PB 609 CG4488-PB 1..609 1..609 3184 100 Plus
Wee1-PA 609 CG4488-PA 1..609 1..609 3184 100 Plus
Myt1-PA 533 CG32417-PA 72..359 209..525 389 30.7 Plus
S6kII-PB 911 CG17596-PB 564..869 235..543 183 24.9 Plus
S6kII-PA 911 CG17596-PA 564..869 235..543 183 24.9 Plus