Clone Sequence Records
BS15016.3prime Sequence
774 bp (774 high quality bases) assembled on 2006-10-23
> BS15016.3prime
ATGGTCTAGAAAGCTTTTAGGATGATGCCGCGGGTGCACTGGCGATAGCC
AGCATGTCAGCGTCAATGTTCTTGAGTGCGTTGTGGTACTCGGTTATCTC
GAGCGCCTCCCACTCGGCCTTGAAGGCGGCCTTTGGATCCTGGGGCATAG
TCATGGCGGCGCCCGTCATGGCATCCGCCTGTGCCTGCGTCTGATCGGCA
TGATTGTTCTCGCCAAGAACCAGTGTGTAGATGGAGCGCAGGCCGAACAC
GTTGAGGAAGTACCAAGAGGCTGAGGAGACCCAGGCGGCGTCCAGCGAGG
CCAGCTCCACGCCCCGCTGGAGCATGGGCTTAAAGCGCAGGGTCAACGGG
AAGGGTACCTTGGTGGTGACGAAGCCCGAAAACATCCAGTTGATCCAGCC
ACCGATCACGACCATGGGCAGCACGTTAATAAAGTTTCCCTTGACCATGT
CGGTGAGCATGGCGGATGAGTTTTGGGCTACAGGCGCCCGTTTCTGAGTC
TTGAAGTAGCCGGTCTCCTCGTTGTTGAAGTAGTTCTTACGCATGGAGAA
GCTCTGGGCGCTGAGATACTTGCCGTTCTCGCGTAGCAAGCGTGCCCGGA
TCATTGCCTGGCTGTCCTGGATTTGGGTGATCTCGGCCTTCTTCTGCGTG
GATATCAGTATAGAGACGTAGTGGCGCACAATGCCCACCAGGAACGTGAT
CAGCACGATGGGCAGGAACACCCACACGCGGATGTCCGGATCAATCAGCA
GCTCCGTCATGTCGACTGATAACT
BS15016.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:12:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6750-PA | 744 | CG6750-RA | 1..744 | 760..17 | 3720 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:28:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6750-RA | 964 | CG6750-RA | 90..833 | 760..17 | 3720 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:28:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10731531..10732129 | 17..615 | 2995 | 100 | Plus |
2L | 23513712 | 2L | 10732186..10732334 | 612..760 | 745 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 16:28:10 has no hits.
BS15016.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:14:39 Download gff for
BS15016.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6750-PA | 1..744 | 17..760 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:47:20 Download gff for
BS15016.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6750-PA | 1..744 | 17..760 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:29:00 Download gff for
BS15016.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6750-RA | 90..840 | 11..760 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:20:51 Download gff for
BS15016.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6750-RA | 90..840 | 11..760 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:20:51 Download gff for
BS15016.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10731524..10732125 | 11..611 | 99 | <- | Plus |
2L | 10732186..10732334 | 612..760 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:29:00 Download gff for
BS15016.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10731524..10732125 | 11..611 | 99 | <- | Plus |
arm_2L | 10732186..10732334 | 612..760 | 100 | | Plus |
BS15016.5prime Sequence
774 bp (757 high quality bases) assembled on 2006-10-23
> BS15016.5prime
GAAGTTATCAGTCGACATGACGGAGCTGCTGATTGATCCGGACATCCGCG
TGTGGGTGTTCCTGCCCATCGTGCTGATCACGTTCCTGGTGGGCATTGTG
CGCCACTACGTCTCTATACTGATATCCACGCAGAAGAAGGCCGAGATCAC
CCAAATCCAGGACAGCCAGGCAATGATCCGGGCACGCTTGCTACGCGAGA
ACGGCAAGTATCTCAGCGCCCAGAGCTTCTCCATGCGTAAGAACTACTTC
AACAACGAGGAGACCGGCTACTTCAAGACTCAGAAACGGGCGCCTGTAGC
CCAAAACTCATCCGCCATGCTCACCGACATGGTCAAGGGAAACTTTATTA
ACGTGCTGCCCATGGTCGTGATCGGTGGCTGGATCAACTGGATGTTTTCG
GGCTTCGTCACCACCAAGGTACCCTTCCCGTTGACCCTGCGCTTTAAGCC
CATGCTCCAGCGGGGCGTGGAGCTGGCCTCGCTGGACGCCGCCTGGGTCT
CCTCAGCCTCTTGGTACTTCCTCAACGTGTTCGGCCTGCGCTCCATCTAC
ACACTGGTTCTTGGCGAGAACAATCATGCCGATCAGACGCAGGCACAGGC
GGATGCCATGACGGGCGCCGCCATGACTATGCCCCAGGATCCAAAGGCCG
CCTTCAAGGCCGAGTGGGAGGCGCTCGAGATAACCGAGTACCACAACGCA
CTCAAGAACATTGACGCTGACATGCTGGCTATCGCCAGTGCACCCGCGGC
ATCATCCTAAAAGCTTTCTAGACC
BS15016.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:12:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6750-PA | 744 | CG6750-RA | 1..744 | 17..760 | 3720 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:27:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6750-RA | 964 | CG6750-RA | 90..833 | 17..760 | 3720 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:27:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10731531..10732129 | 760..162 | 2995 | 100 | Minus |
2L | 23513712 | 2L | 10732186..10732334 | 165..17 | 745 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 15:27:18 has no hits.
BS15016.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:14:40 Download gff for
BS15016.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6750-PA | 1..744 | 17..760 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:47:21 Download gff for
BS15016.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6750-PA | 1..744 | 17..760 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:54:15 Download gff for
BS15016.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6750-RA | 90..840 | 17..766 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:49:18 Download gff for
BS15016.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6750-RA | 90..840 | 17..766 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:49:18 Download gff for
BS15016.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10731524..10732125 | 166..766 | 99 | <- | Minus |
2L | 10732186..10732334 | 17..165 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:54:15 Download gff for
BS15016.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10731524..10732125 | 166..766 | 99 | <- | Minus |
arm_2L | 10732186..10732334 | 17..165 | 100 | | Minus |
BS15016.complete Sequence
776 bp assembled on 2006-11-01
GenBank Submission: FJ637855
> BS15016.complete
GAAGTTATCAGTCGACATGACGGAGCTGCTGATTGATCCGGACATCCGCG
TGTGGGTGTTCCTGCCCATCGTGCTGATCACGTTCCTGGTGGGCATTGTG
CGCCACTACGTCTCTATACTGATATCCACGCAGAAGAAGGCCGAGATCAC
CCAAATCCAGGACAGCCAGGCAATGATCCGGGCACGCTTGCTACGCGAGA
ACGGCAAGTATCTCAGCGCCCAGAGCTTCTCCATGCGTAAGAACTACTTC
AACAACGAGGAGACCGGCTACTTCAAGACTCAGAAACGGGCGCCTGTAGC
CCAAAACTCATCCGCCATGCTCACCGACATGGTCAAGGGAAACTTTATTA
ACGTGCTGCCCATGGTCGTGATCGGTGGCTGGATCAACTGGATGTTTTCG
GGCTTCGTCACCACCAAGGTACCCTTCCCGTTGACCCTGCGCTTTAAGCC
CATGCTCCAGCGGGGCGTGGAGCTGGCCTCGCTGGACGCCGCCTGGGTCT
CCTCAGCCTCTTGGTACTTCCTCAACGTGTTCGGCCTGCGCTCCATCTAC
ACACTGGTTCTTGGCGAGAACAATCATGCCGATCAGACGCAGGCACAGGC
GGATGCCATGACGGGCGCCGCCATGACTATGCCCCAGGATCCAAAGGCCG
CCTTCAAGGCCGAGTGGGAGGCGCTCGAGATAACCGAGTACCACAACGCA
CTCAAGAACATTGACGCTGACATGCTGGCTATCGCCAGTGCACCCGCGGC
ATCATCCTAAAAGCTTTCTAGACCAT
BS15016.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:53:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6750-RA | 744 | CG6750-PA | 1..744 | 17..760 | 3720 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:53:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6750-RA | 964 | CG6750-RA | 90..833 | 17..760 | 3720 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:53:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10731531..10732129 | 760..162 | 2995 | 100 | Minus |
2L | 23513712 | 2L | 10732186..10732334 | 165..17 | 745 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:53:56 has no hits.
BS15016.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:33:51 Download gff for
BS15016.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6750-RA | 1..744 | 17..760 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:06:33 Download gff for
BS15016.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6750-RA | 73..823 | 17..766 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:46:41 Download gff for
BS15016.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6750-RA | 90..831 | 17..758 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:33:51 Download gff for
BS15016.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6750-RA | 73..823 | 17..766 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:55:13 Download gff for
BS15016.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6750-RA | 90..831 | 17..758 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:55:13 Download gff for
BS15016.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10731533..10732125 | 166..758 | 100 | <- | Minus |
2L | 10732186..10732334 | 17..165 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:46:41 Download gff for
BS15016.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10731533..10732125 | 166..758 | 100 | <- | Minus |
arm_2L | 10732186..10732334 | 17..165 | 100 | | Minus |
BS15016.pep Sequence
Translation from 16 to 759
> BS15016.pep
MTELLIDPDIRVWVFLPIVLITFLVGIVRHYVSILISTQKKAEITQIQDS
QAMIRARLLRENGKYLSAQSFSMRKNYFNNEETGYFKTQKRAPVAQNSSA
MLTDMVKGNFINVLPMVVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRG
VELASLDAAWVSSASWYFLNVFGLRSIYTLVLGENNHADQTQAQADAMTG
AAMTMPQDPKAAFKAEWEALEITEYHNALKNIDADMLAIASAPAASS*
BS15016.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:29:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6750-PA | 247 | CG6750-PA | 1..247 | 1..247 | 1259 | 100 | Plus |