Clone BS15016 Report

Search the DGRC for BS15016

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:150
Well:16
Vector:pDNR-Dual
Associated Gene/TranscriptCG6750-RA
Protein status:BS15016.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS15016.3prime Sequence

774 bp (774 high quality bases) assembled on 2006-10-23

> BS15016.3prime
ATGGTCTAGAAAGCTTTTAGGATGATGCCGCGGGTGCACTGGCGATAGCC
AGCATGTCAGCGTCAATGTTCTTGAGTGCGTTGTGGTACTCGGTTATCTC
GAGCGCCTCCCACTCGGCCTTGAAGGCGGCCTTTGGATCCTGGGGCATAG
TCATGGCGGCGCCCGTCATGGCATCCGCCTGTGCCTGCGTCTGATCGGCA
TGATTGTTCTCGCCAAGAACCAGTGTGTAGATGGAGCGCAGGCCGAACAC
GTTGAGGAAGTACCAAGAGGCTGAGGAGACCCAGGCGGCGTCCAGCGAGG
CCAGCTCCACGCCCCGCTGGAGCATGGGCTTAAAGCGCAGGGTCAACGGG
AAGGGTACCTTGGTGGTGACGAAGCCCGAAAACATCCAGTTGATCCAGCC
ACCGATCACGACCATGGGCAGCACGTTAATAAAGTTTCCCTTGACCATGT
CGGTGAGCATGGCGGATGAGTTTTGGGCTACAGGCGCCCGTTTCTGAGTC
TTGAAGTAGCCGGTCTCCTCGTTGTTGAAGTAGTTCTTACGCATGGAGAA
GCTCTGGGCGCTGAGATACTTGCCGTTCTCGCGTAGCAAGCGTGCCCGGA
TCATTGCCTGGCTGTCCTGGATTTGGGTGATCTCGGCCTTCTTCTGCGTG
GATATCAGTATAGAGACGTAGTGGCGCACAATGCCCACCAGGAACGTGAT
CAGCACGATGGGCAGGAACACCCACACGCGGATGTCCGGATCAATCAGCA
GCTCCGTCATGTCGACTGATAACT

BS15016.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:12:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG6750-PA 744 CG6750-RA 1..744 760..17 3720 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:28:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG6750-RA 964 CG6750-RA 90..833 760..17 3720 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:28:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10731531..10732129 17..615 2995 100 Plus
2L 23513712 2L 10732186..10732334 612..760 745 100 Plus
Blast to na_te.dros performed on 2015-02-10 16:28:10 has no hits.

BS15016.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:14:39 Download gff for BS15016.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6750-PA 1..744 17..760 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:47:20 Download gff for BS15016.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6750-PA 1..744 17..760 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:29:00 Download gff for BS15016.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6750-RA 90..840 11..760 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:20:51 Download gff for BS15016.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6750-RA 90..840 11..760 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:20:51 Download gff for BS15016.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 10731524..10732125 11..611 99 <- Plus
2L 10732186..10732334 612..760 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:29:00 Download gff for BS15016.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10731524..10732125 11..611 99 <- Plus
arm_2L 10732186..10732334 612..760 100   Plus

BS15016.5prime Sequence

774 bp (757 high quality bases) assembled on 2006-10-23

> BS15016.5prime
GAAGTTATCAGTCGACATGACGGAGCTGCTGATTGATCCGGACATCCGCG
TGTGGGTGTTCCTGCCCATCGTGCTGATCACGTTCCTGGTGGGCATTGTG
CGCCACTACGTCTCTATACTGATATCCACGCAGAAGAAGGCCGAGATCAC
CCAAATCCAGGACAGCCAGGCAATGATCCGGGCACGCTTGCTACGCGAGA
ACGGCAAGTATCTCAGCGCCCAGAGCTTCTCCATGCGTAAGAACTACTTC
AACAACGAGGAGACCGGCTACTTCAAGACTCAGAAACGGGCGCCTGTAGC
CCAAAACTCATCCGCCATGCTCACCGACATGGTCAAGGGAAACTTTATTA
ACGTGCTGCCCATGGTCGTGATCGGTGGCTGGATCAACTGGATGTTTTCG
GGCTTCGTCACCACCAAGGTACCCTTCCCGTTGACCCTGCGCTTTAAGCC
CATGCTCCAGCGGGGCGTGGAGCTGGCCTCGCTGGACGCCGCCTGGGTCT
CCTCAGCCTCTTGGTACTTCCTCAACGTGTTCGGCCTGCGCTCCATCTAC
ACACTGGTTCTTGGCGAGAACAATCATGCCGATCAGACGCAGGCACAGGC
GGATGCCATGACGGGCGCCGCCATGACTATGCCCCAGGATCCAAAGGCCG
CCTTCAAGGCCGAGTGGGAGGCGCTCGAGATAACCGAGTACCACAACGCA
CTCAAGAACATTGACGCTGACATGCTGGCTATCGCCAGTGCACCCGCGGC
ATCATCCTAAAAGCTTTCTAGACC

BS15016.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:12:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG6750-PA 744 CG6750-RA 1..744 17..760 3720 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:27:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG6750-RA 964 CG6750-RA 90..833 17..760 3720 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:27:16
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10731531..10732129 760..162 2995 100 Minus
2L 23513712 2L 10732186..10732334 165..17 745 100 Minus
Blast to na_te.dros performed on 2015-02-13 15:27:18 has no hits.

BS15016.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:14:40 Download gff for BS15016.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6750-PA 1..744 17..760 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:47:21 Download gff for BS15016.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6750-PA 1..744 17..760 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:54:15 Download gff for BS15016.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6750-RA 90..840 17..766 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:49:18 Download gff for BS15016.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6750-RA 90..840 17..766 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:49:18 Download gff for BS15016.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 10731524..10732125 166..766 99 <- Minus
2L 10732186..10732334 17..165 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:54:15 Download gff for BS15016.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10731524..10732125 166..766 99 <- Minus
arm_2L 10732186..10732334 17..165 100   Minus

BS15016.complete Sequence

776 bp assembled on 2006-11-01

GenBank Submission: FJ637855

> BS15016.complete
GAAGTTATCAGTCGACATGACGGAGCTGCTGATTGATCCGGACATCCGCG
TGTGGGTGTTCCTGCCCATCGTGCTGATCACGTTCCTGGTGGGCATTGTG
CGCCACTACGTCTCTATACTGATATCCACGCAGAAGAAGGCCGAGATCAC
CCAAATCCAGGACAGCCAGGCAATGATCCGGGCACGCTTGCTACGCGAGA
ACGGCAAGTATCTCAGCGCCCAGAGCTTCTCCATGCGTAAGAACTACTTC
AACAACGAGGAGACCGGCTACTTCAAGACTCAGAAACGGGCGCCTGTAGC
CCAAAACTCATCCGCCATGCTCACCGACATGGTCAAGGGAAACTTTATTA
ACGTGCTGCCCATGGTCGTGATCGGTGGCTGGATCAACTGGATGTTTTCG
GGCTTCGTCACCACCAAGGTACCCTTCCCGTTGACCCTGCGCTTTAAGCC
CATGCTCCAGCGGGGCGTGGAGCTGGCCTCGCTGGACGCCGCCTGGGTCT
CCTCAGCCTCTTGGTACTTCCTCAACGTGTTCGGCCTGCGCTCCATCTAC
ACACTGGTTCTTGGCGAGAACAATCATGCCGATCAGACGCAGGCACAGGC
GGATGCCATGACGGGCGCCGCCATGACTATGCCCCAGGATCCAAAGGCCG
CCTTCAAGGCCGAGTGGGAGGCGCTCGAGATAACCGAGTACCACAACGCA
CTCAAGAACATTGACGCTGACATGCTGGCTATCGCCAGTGCACCCGCGGC
ATCATCCTAAAAGCTTTCTAGACCAT

BS15016.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:53:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG6750-RA 744 CG6750-PA 1..744 17..760 3720 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:53:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG6750-RA 964 CG6750-RA 90..833 17..760 3720 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:53:55
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10731531..10732129 760..162 2995 100 Minus
2L 23513712 2L 10732186..10732334 165..17 745 100 Minus
Blast to na_te.dros performed on 2014-11-27 14:53:56 has no hits.

BS15016.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:33:51 Download gff for BS15016.complete
Subject Subject Range Query Range Percent Splice Strand
CG6750-RA 1..744 17..760 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:06:33 Download gff for BS15016.complete
Subject Subject Range Query Range Percent Splice Strand
CG6750-RA 73..823 17..766 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:46:41 Download gff for BS15016.complete
Subject Subject Range Query Range Percent Splice Strand
CG6750-RA 90..831 17..758 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:33:51 Download gff for BS15016.complete
Subject Subject Range Query Range Percent Splice Strand
CG6750-RA 73..823 17..766 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:55:13 Download gff for BS15016.complete
Subject Subject Range Query Range Percent Splice Strand
CG6750-RA 90..831 17..758 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:55:13 Download gff for BS15016.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10731533..10732125 166..758 100 <- Minus
2L 10732186..10732334 17..165 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:46:41 Download gff for BS15016.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10731533..10732125 166..758 100 <- Minus
arm_2L 10732186..10732334 17..165 100   Minus

BS15016.pep Sequence

Translation from 16 to 759

> BS15016.pep
MTELLIDPDIRVWVFLPIVLITFLVGIVRHYVSILISTQKKAEITQIQDS
QAMIRARLLRENGKYLSAQSFSMRKNYFNNEETGYFKTQKRAPVAQNSSA
MLTDMVKGNFINVLPMVVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRG
VELASLDAAWVSSASWYFLNVFGLRSIYTLVLGENNHADQTQAQADAMTG
AAMTMPQDPKAAFKAEWEALEITEYHNALKNIDADMLAIASAPAASS*

BS15016.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:29:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG6750-PA 247 CG6750-PA 1..247 1..247 1259 100 Plus